Factsheet for TraesCS2A01G526400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G529100.1	Wheat	nucleus	98.23	98.23
TraesCS2B01G556700.1	Wheat	nucleus	97.05	97.05
HORVU2Hr1G116150.4	Barley	nucleus	76.82	94.44
Os04t0636900-02	Rice	nucleus	78.0	77.09
Zm00001d026397_P001	Maize	nucleus, plasma membrane	76.62	74.86
EES12939	Sorghum	nucleus	77.21	74.57
Zm00001d002141_P006	Maize	nucleus	74.66	72.94
GSMUA_Achr10P...	Banana	nucleus	20.43	45.02
GSMUA_AchrUn_...	Banana	nucleus	34.38	40.79
GSMUA_Achr4P09210_001	Banana	nucleus	33.4	38.46
CDY06947	Canola	nucleus	30.45	36.05
Bra007277.1-P	Field mustard	nucleus	31.43	35.63
CDY27186	Canola	nucleus	31.43	35.63
CDX72106	Canola	nucleus	31.63	35.38
Solyc01g008970.2.1	Tomato	nucleus	26.13	35.37
KRG94993	Soybean	nucleus	33.2	35.28
Bra016954.1-P	Field mustard	nucleus	30.45	35.23
KRH66628	Soybean	nucleus	32.81	34.36
CDX76015	Canola	nucleus	20.43	34.1
Bra014667.1-P	Field mustard	nucleus	20.43	34.1
CDY57580	Canola	nucleus	29.47	33.86
AT2G41060.3	Thale cress	nucleus	29.67	33.48
AT3G56860.10	Thale cress	nucleus	31.43	33.47
VIT_08s0056g00690.t01	Wine grape	nucleus	30.26	33.26
TraesCS3A01G220400.1	Wheat	nucleus	28.09	32.5
KRH73477	Soybean	nucleus	31.63	32.46
TraesCS3A01G181900.1	Wheat	nucleus	30.45	32.29
VIT_06s0009g01180.t01	Wine grape	mitochondrion, nucleus, plastid	32.81	32.24
KRH14673	Soybean	nucleus	31.24	32.19
PGSC0003DMT400058431	Potato	nucleus	29.86	31.02
CDY47382	Canola	golgi, plastid	20.24	24.76
TraesCS7A01G360900.1	Wheat	nucleus	15.52	19.7
TraesCS7A01G398200.1	Wheat	cytosol, mitochondrion, nucleus	10.81	19.43
TraesCS4A01G068100.1	Wheat	nucleus	9.23	18.88
TraesCS6A01G187000.1	Wheat	nucleus	15.13	18.64
TraesCS6A01G278300.3	Wheat	plastid	10.22	17.81
TraesCS3A01G499100.1	Wheat	cytosol, nucleus, plastid	10.81	17.63
TraesCS3A01G389600.1	Wheat	nucleus	10.22	17.51
TraesCS7A01G178700.2	Wheat	nucleus	10.41	17.43
TraesCS1A01G234200.1	Wheat	cytosol	12.38	17.26
TraesCS3A01G485000.1	Wheat	cytosol	12.57	17.16
TraesCS1A01G150600.1	Wheat	nucleus	14.73	16.52
TraesCS6A01G291100.1	Wheat	nucleus	11.0	16.42
TraesCS4A01G106800.2	Wheat	cytosol, mitochondrion, nucleus	9.63	16.28
TraesCS5A01G405300.1	Wheat	nucleus	11.2	15.88
TraesCS7A01G282600.1	Wheat	cytosol	10.61	15.43
TraesCS2A01G267500.1	Wheat	nucleus	11.0	15.05
TraesCS4A01G150600.1	Wheat	nucleus	13.56	14.9
TraesCS2A01G190400.1	Wheat	plastid	14.15	13.56
TraesCS6A01G318100.1	Wheat	nucleus	9.82	10.27

Protein Annotations

EnsemblPlants:TraesCS2A01G526400.1	EnsemblPlantsGene:TraesCS2A01G526400	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf	InterPro:RRM_dom	PANTHER:PTHR44578
PFAM:PF00076	PFscan:PS50102	SEG:seg	SMART:SM00360	SUPFAM:SSF54928	TIGR:cd12384
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:746753860..746755389

Molecular Weight (calculated)

52140.7 Da

IEP (calculated)

6.184

GRAVY (calculated)

-0.304

Length

509 amino acids

Sequence
(BLAST)

001: MAPKKRKADP AAAAGADPAA HHEKPEQKPR VGTIYYPITD DPPEPAADAA AAAALEEEDL AYDYEEEDVT KLLEPLSREQ LVALLRAAAE ASPATMAAVR
101: RAAESDPASR KLFVHGLGWG AGVEDLRSAF SRFGELEDCR VITDKQSGKS KGYGFVLYQS RTSALRALRR PQLDIGGRLA FCHLAASGPA PPASQSHNPS
201: SNANASSGTT NNNAPASSSS LPDNMQRKIF VGNVHADVDV NRLYEYFSQF GEIEEGPLGF DKSTGKPKGF ALFVYKSVDS ARRALEEPMR NFDGKMLNVQ
301: KAIDGRTKGS SGSNSSANNA NATAASTQMT MPSIAAINPY DPSAYGAAAV HDMGFAQQAA LLGMGAQQQA FAQPNTAMLA MMAAAMQNPA MLASLNPAFA
401: AAALGAGGQS GIPGFGAQGF GTQGFGAAGV NFPNAAGLQG AAAYQGGPPG FQGTPGFPTS AGFQVGQAAS QTGTTAAATG AAGGYQAGAA GQGQVSNTQI
501: GGTGFQGGY

Best Arabidopsis Sequence Match ( AT2G41060.2 )
(BLAST)

001: MTKKRKLESE SNETSEPTEK QQQQCEKEDP EIRNVDNQRD DDEQVVEQDT LKEMHEEEAK GEDNIEAETS SGSGNQGNED DDEEEPIEDL LEPFSKDQLL
101: ILLKEAAERH RDVANRIRIV ADEDLVHRKI FVHGLGWDTK ADSLIDAFKQ YGEIEDCKCV VDKVSGQSKG YGFILFKSRS GARNALKQPQ KKIGTRMTAC
201: QLASIGPVQG NPVVAPAQHF NPENVQRKIY VSNVSADIDP QKLLEFFSRF GEIEEGPLGL DKATGRPKGF ALFVYRSLES AKKALEEPHK TFEGHVLHCH
301: KANDGPKQVK QHQHNHNSHN QNSRYQRNDN NGYGAPGGHG HFIAGNNQAV QAFNPAIGQA LTALLASQGA GLGLNQAFGQ ALLGTLGTAS PGAVGGMPSG
401: YGTQANISPG VYPGYGAQAG YQGGYQTQQP GQGGAGRGQH GAGYGGPYMG R

Arabidopsis Description

UBA2BUBP1-associated protein 2B [Source:UniProtKB/Swiss-Prot;Acc:O80678]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.