Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G526400.1 | Wheat | nucleus | 98.23 | 98.23 |
| TraesCS2B01G556700.1 | Wheat | nucleus | 97.64 | 97.64 |
| HORVU2Hr1G116150.4 | Barley | nucleus | 77.41 | 95.17 |
| Os04t0636900-02 | Rice | nucleus | 78.59 | 77.67 |
| Zm00001d026397_P001 | Maize | nucleus, plasma membrane | 77.01 | 75.24 |
| EES12939 | Sorghum | nucleus | 77.6 | 74.95 |
| Zm00001d002141_P006 | Maize | nucleus | 74.85 | 73.13 |
| GSMUA_Achr10P... | Banana | nucleus | 20.24 | 44.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.38 | 40.79 |
| GSMUA_Achr4P09210_001 | Banana | nucleus | 33.6 | 38.69 |
| CDY06947 | Canola | nucleus | 30.45 | 36.05 |
| Bra007277.1-P | Field mustard | nucleus | 31.43 | 35.63 |
| CDY27186 | Canola | nucleus | 31.43 | 35.63 |
| KRG94993 | Soybean | nucleus | 33.4 | 35.49 |
| CDX72106 | Canola | nucleus | 31.63 | 35.38 |
| Solyc01g008970.2.1 | Tomato | nucleus | 26.13 | 35.37 |
| Bra016954.1-P | Field mustard | nucleus | 30.45 | 35.23 |
| KRH66628 | Soybean | nucleus | 32.61 | 34.16 |
| CDX76015 | Canola | nucleus | 20.43 | 34.1 |
| Bra014667.1-P | Field mustard | nucleus | 20.43 | 34.1 |
| CDY57580 | Canola | nucleus | 29.47 | 33.86 |
| AT2G41060.3 | Thale cress | nucleus | 29.67 | 33.48 |
| AT3G56860.10 | Thale cress | nucleus | 31.43 | 33.47 |
| VIT_08s0056g00690.t01 | Wine grape | nucleus | 30.26 | 33.26 |
| KRH73477 | Soybean | nucleus | 31.63 | 32.46 |
| TraesCS3D01G186500.1 | Wheat | nucleus | 30.45 | 32.29 |
| VIT_06s0009g01180.t01 | Wine grape | mitochondrion, nucleus, plastid | 32.81 | 32.24 |
| KRH14673 | Soybean | nucleus | 31.24 | 32.19 |
| TraesCS3D01G232300.1 | Wheat | nucleus | 27.7 | 32.05 |
| PGSC0003DMT400058431 | Potato | nucleus | 29.86 | 31.02 |
| CDY47382 | Canola | golgi, plastid | 20.24 | 24.76 |
| TraesCS7D01G392500.1 | Wheat | cytosol, nucleus, plastid | 10.81 | 19.16 |
| TraesCS4D01G225900.1 | Wheat | nucleus | 9.23 | 18.88 |
| TraesCS6D01G173900.1 | Wheat | nucleus | 15.13 | 18.83 |
| TraesCS6D01G258900.4 | Wheat | plastid | 10.41 | 18.4 |
| TraesCS3D01G480300.1 | Wheat | cytosol | 13.16 | 17.96 |
| TraesCS7D01G180800.1 | Wheat | nucleus | 10.41 | 17.61 |
| TraesCS7D01G362200.1 | Wheat | nucleus | 15.32 | 17.57 |
| TraesCS1D01G237800.3 | Wheat | cytosol | 12.38 | 17.31 |
| TraesCS3D01G380100.1 | Wheat | nucleus | 10.02 | 17.23 |
| TraesCS3D01G505900.1 | Wheat | mitochondrion | 10.41 | 16.77 |
| TraesCS6D01G272500.1 | Wheat | nucleus | 11.39 | 16.71 |
| TraesCS1D01G147600.1 | Wheat | nucleus | 14.73 | 16.52 |
| TraesCS6D01G297300.1 | Wheat | plastid | 10.02 | 16.35 |
| TraesCS7D01G281300.1 | Wheat | nucleus | 11.0 | 15.77 |
| TraesCS5D01G415400.1 | Wheat | nucleus | 10.61 | 15.61 |
| TraesCS4D01G198000.3 | Wheat | cytosol | 9.63 | 15.36 |
| TraesCS2D01G197500.2 | Wheat | nucleus | 14.15 | 15.32 |
| TraesCS2D01G256500.1 | Wheat | nucleus | 11.0 | 14.97 |
| TraesCS4D01G152200.1 | Wheat | nucleus | 13.56 | 14.9 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G529100.1 | EnsemblPlantsGene:TraesCS2D01G529100 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom | PANTHER:PTHR44578 |
| PFAM:PF00076 | PFscan:PS50102 | SEG:seg | SMART:SM00360 | SUPFAM:SSF54928 | TIGR:cd12384 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:616569399..616570928
Molecular Weight (calculated)
52083.6 Da
IEP (calculated)
6.000
GRAVY (calculated)
-0.295
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKKRKADP AAAAGADPAA HHEKPEQKPR VGTIYYPITD DPPEPAADAA AAAALEDEDL AYDYEEEDVT KLLEPLSREQ LVALLRAAAE ASPATMAAVR
101: RAAESDPASR KLFVHGLGWG AGVEDLRSAF SRFGELEDCR VITDKQSGKS KGYGFVLYQS RTSALRALRR PQLEIGGRLA FCHLAASGPA PPASQSQNPS
201: SNANASSGAT NNSAPASSSS LPDNMQRKIF VGNVHADVDV NRLYEYFSQF GEIEEGPLGF DKSTGKPKGF ALFVYKSVDS ARRALEEPMR NFDGKMLNVQ
301: KAIDGRTKGS SGSNSNANNA NATAASTQMT VPSIAAINPY DPSAYGATAV HDMGFAQQAA LLGMGAQQQA FAQPNTAMLA MMAAAMQNPA MLASLNPAFA
401: AAALGAGGQA GIPGFGAQGF GTQGFGAAGV NFPNAAGLQG AAAYQGGPPG FQGTPGFPTS AGFQVGQAAS QTGTTAAATG AAGGYQAGAA GQGQVSNTQI
501: GGTGFQGGY
101: RAAESDPASR KLFVHGLGWG AGVEDLRSAF SRFGELEDCR VITDKQSGKS KGYGFVLYQS RTSALRALRR PQLEIGGRLA FCHLAASGPA PPASQSQNPS
201: SNANASSGAT NNSAPASSSS LPDNMQRKIF VGNVHADVDV NRLYEYFSQF GEIEEGPLGF DKSTGKPKGF ALFVYKSVDS ARRALEEPMR NFDGKMLNVQ
301: KAIDGRTKGS SGSNSNANNA NATAASTQMT VPSIAAINPY DPSAYGATAV HDMGFAQQAA LLGMGAQQQA FAQPNTAMLA MMAAAMQNPA MLASLNPAFA
401: AAALGAGGQA GIPGFGAQGF GTQGFGAAGV NFPNAAGLQG AAAYQGGPPG FQGTPGFPTS AGFQVGQAAS QTGTTAAATG AAGGYQAGAA GQGQVSNTQI
501: GGTGFQGGY
001: MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
Arabidopsis Description
UBA2AUBP1-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LES2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.