Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 69.68 | 71.79 |
| GSMUA_Achr10P... | Banana | nucleus | 36.2 | 69.26 |
| Solyc01g008970.2.1 | Tomato | nucleus | 31.0 | 36.44 |
| GSMUA_Achr5P17700_001 | Banana | cytosol | 7.47 | 35.48 |
| Bra014667.1-P | Field mustard | nucleus | 23.98 | 34.75 |
| CDX76015 | Canola | nucleus | 23.98 | 34.75 |
| Zm00001d026397_P001 | Maize | nucleus, plasma membrane | 40.5 | 34.36 |
| Os04t0636900-02 | Rice | nucleus | 39.59 | 33.98 |
| GSMUA_Achr5P09550_001 | Banana | nucleus | 28.51 | 33.87 |
| TraesCS2D01G529100.1 | Wheat | nucleus | 38.69 | 33.6 |
| GSMUA_Achr6P15950_001 | Banana | nucleus | 35.29 | 33.48 |
| TraesCS2B01G556700.1 | Wheat | nucleus | 38.46 | 33.4 |
| TraesCS2A01G526400.1 | Wheat | nucleus | 38.46 | 33.4 |
| CDY06947 | Canola | nucleus | 32.35 | 33.26 |
| Zm00001d002141_P006 | Maize | nucleus | 38.91 | 33.01 |
| EES12939 | Sorghum | nucleus | 39.14 | 32.83 |
| HORVU2Hr1G116150.4 | Barley | nucleus | 30.54 | 32.61 |
| CDX72106 | Canola | nucleus | 33.48 | 32.53 |
| Bra007277.1-P | Field mustard | nucleus | 33.03 | 32.52 |
| Bra016954.1-P | Field mustard | nucleus | 32.35 | 32.5 |
| CDY27186 | Canola | nucleus | 32.81 | 32.29 |
| CDY57580 | Canola | nucleus | 32.35 | 32.28 |
| GSMUA_Achr9P12410_001 | Banana | nucleus | 24.43 | 32.24 |
| VIT_08s0056g00690.t01 | Wine grape | nucleus | 33.71 | 32.18 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 31.45 | 32.03 |
| AT2G41060.3 | Thale cress | nucleus | 32.58 | 31.93 |
| KRG94993 | Soybean | nucleus | 34.39 | 31.73 |
| GSMUA_Achr5P09540_001 | Banana | nucleus | 27.83 | 31.7 |
| KRH66628 | Soybean | nucleus | 34.16 | 31.07 |
| AT3G56860.10 | Thale cress | nucleus | 33.26 | 30.75 |
| GSMUA_Achr4P09830_001 | Banana | mitochondrion | 10.41 | 30.46 |
| KRH14673 | Soybean | nucleus | 33.26 | 29.76 |
| KRH73477 | Soybean | nucleus | 32.58 | 29.03 |
| PGSC0003DMT400058431 | Potato | nucleus | 32.13 | 28.98 |
| GSMUA_Achr3P06540_001 | Banana | nucleus, plastid | 10.18 | 28.3 |
| VIT_06s0009g01180.t01 | Wine grape | mitochondrion, nucleus, plastid | 32.58 | 27.8 |
| CDY47382 | Canola | golgi, plastid | 23.76 | 25.24 |
| GSMUA_Achr9P14920_001 | Banana | plastid | 9.95 | 24.86 |
| GSMUA_Achr7P00730_001 | Banana | cytosol | 9.95 | 24.31 |
| HORVU2Hr1G116230.1 | Barley | nucleus | 20.14 | 21.92 |
| GSMUA_Achr9P12880_001 | Banana | cytosol | 10.86 | 20.87 |
| GSMUA_Achr4P32300_001 | Banana | nucleus | 6.79 | 20.41 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 11.09 | 20.33 |
| GSMUA_Achr8P23460_001 | Banana | nucleus | 10.18 | 19.07 |
| GSMUA_Achr8P24330_001 | Banana | nucleus, plastid | 12.44 | 18.97 |
| GSMUA_Achr8P08440_001 | Banana | nucleus | 10.86 | 18.53 |
| GSMUA_Achr10P... | Banana | nucleus | 10.18 | 18.15 |
| GSMUA_Achr11P... | Banana | nucleus | 10.63 | 17.74 |
| GSMUA_Achr3P21850_001 | Banana | nucleus | 10.41 | 17.56 |
| GSMUA_Achr5P05400_001 | Banana | mitochondrion | 10.41 | 17.42 |
| GSMUA_Achr10P... | Banana | nucleus | 12.9 | 17.12 |
| GSMUA_Achr6P17510_001 | Banana | cytosol, mitochondrion, nucleus | 10.41 | 17.04 |
| GSMUA_Achr10P... | Banana | nucleus | 10.41 | 16.97 |
| GSMUA_Achr7P13480_001 | Banana | nucleus | 12.67 | 16.62 |
| GSMUA_Achr3P13820_001 | Banana | cytosol | 10.41 | 16.49 |
| GSMUA_Achr1P19260_001 | Banana | nucleus | 11.09 | 14.5 |
| GSMUA_AchrUn_... | Banana | cytosol | 10.63 | 14.29 |
| GSMUA_Achr2P14710_001 | Banana | cytosol | 10.63 | 13.09 |
| GSMUA_Achr4P33100_001 | Banana | nucleus | 12.9 | 12.9 |
| GSMUA_Achr1P09440_001 | Banana | cytosol | 9.5 | 12.39 |
| GSMUA_Achr1P10970_001 | Banana | nucleus | 11.99 | 12.16 |
| GSMUA_Achr8P25380_001 | Banana | nucleus | 10.18 | 11.87 |
| GSMUA_Achr10P... | Banana | nucleus | 11.76 | 11.82 |
| GSMUA_Achr4P28100_001 | Banana | nucleus | 11.76 | 11.76 |
| GSMUA_Achr10P... | Banana | nucleus | 12.22 | 11.74 |
| GSMUA_Achr6P10970_001 | Banana | nucleus | 11.76 | 10.4 |
| GSMUA_Achr4P24260_001 | Banana | cytosol | 7.24 | 9.73 |
| GSMUA_Achr3P02300_001 | Banana | nucleus | 12.67 | 8.25 |
| GSMUA_Achr6P24180_001 | Banana | cytosol | 10.86 | 7.2 |
| GSMUA_Achr5P17690_001 | Banana | nucleus | 5.66 | 6.19 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P09210_001 | EnsemblPlants:GSMUA_Achr4T09210_001 | EnsemblPlantsGene:GSMUA_Achr4G09210_001 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | PANTHER:PTHR44578 | PFAM:PF00076 | PFscan:PS50102 | SEG:seg | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI0002955044 | UniProt:M0SMD8 | MapMan:35.1 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G09210_001]
Coordinates
chr4:-:6700545..6702456
Molecular Weight (calculated)
49564.1 Da
IEP (calculated)
7.647
GRAVY (calculated)
-0.323
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKKRKVDQ EDDLLPAAPN HADNPLPQLH QQPVVYTQAP ASDDEDGGRG SESDQDDDDD DVGNLLEPIS RDRLVGLLRF AAASDPAALA EIRRVADLDP
101: VHRKLFVHGL GWDTTAEGLR AAFVRYGDID DCRVIVDKAS GRSKGYGFVL FRHRSSARRA LRRPQKLIDN RMTSCQLASA GPSASLHHHN SAKIYVGNVH
201: SDIDGGRLLA FFSQYGEIEE GPIGFDRHTG KPKGYALFVY KTVEGALRAL EEPSKNFEGH LLHCQKATDN KSKGALVQNT AASPNVVPST GTLNGPAMEW
301: EVLGIRWLQG FRGIRVFKAR QGFKGLQVFR ALIQLLNKEE QEVLALTLQR QVQCQGHQLD QWVDTVHFSF APRSWLFMLF KDRMTFQYLL ALDIRERLPM
401: QQLFKQWNCL SSFLVVYGCT DFGFIFHFNI SPLTGTQVLC FL
101: VHRKLFVHGL GWDTTAEGLR AAFVRYGDID DCRVIVDKAS GRSKGYGFVL FRHRSSARRA LRRPQKLIDN RMTSCQLASA GPSASLHHHN SAKIYVGNVH
201: SDIDGGRLLA FFSQYGEIEE GPIGFDRHTG KPKGYALFVY KTVEGALRAL EEPSKNFEGH LLHCQKATDN KSKGALVQNT AASPNVVPST GTLNGPAMEW
301: EVLGIRWLQG FRGIRVFKAR QGFKGLQVFR ALIQLLNKEE QEVLALTLQR QVQCQGHQLD QWVDTVHFSF APRSWLFMLF KDRMTFQYLL ALDIRERLPM
401: QQLFKQWNCL SSFLVVYGCT DFGFIFHFNI SPLTGTQVLC FL
001: MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
Arabidopsis Description
UBA2AUBP1-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LES2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.