Factsheet for Bra014667.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76015	Canola	nucleus	89.84	89.84
Bra007277.1-P	Field mustard	nucleus	73.44	49.89
AT3G56860.10	Thale cress	nucleus	73.44	46.86
Bra016954.1-P	Field mustard	nucleus	60.66	42.05
KRG94993	Soybean	nucleus	56.72	36.12
VIT_08s0056g00690.t01	Wine grape	nucleus	54.1	35.64
KRH66628	Soybean	nucleus	55.74	34.98
Zm00001d040344_P001	Maize	extracellular, plasma membrane	49.84	33.48
GSMUA_Achr6P15950_001	Banana	nucleus	49.51	32.4
EES02736	Sorghum	plastid	48.52	31.9
TraesCS3B01G211700.1	Wheat	nucleus	46.23	31.13
TraesCS3D01G186500.1	Wheat	nucleus	47.87	30.42
TraesCS3A01G181900.1	Wheat	nucleus	47.54	30.21
HORVU3Hr1G037280.1	Barley	nucleus, plastid	48.2	30.12
Os01t0265800-01	Rice	nucleus	48.2	30.0
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	40.98	28.8
GSMUA_Achr10P...	Banana	nucleus	20.33	26.84
Bra031230.1-P	Field mustard	nucleus	25.25	25.08
GSMUA_AchrUn_...	Banana	nucleus	34.43	24.48
GSMUA_Achr4P09210_001	Banana	nucleus	34.75	23.98
HORVU6Hr1G054690.5	Barley	plastid	13.77	22.34
Bra035441.1-P	Field mustard	mitochondrion, nucleus, plastid	5.57	21.79
KXG30578	Sorghum	nucleus	26.56	21.77
Os02t0602600-00	Rice	nucleus	27.54	21.76
Bra038113.1-P	Field mustard	nucleus	29.51	21.74
Bra039664.1-P	Field mustard	nucleus	29.51	21.69
HORVU2Hr1G116150.4	Barley	nucleus	27.87	20.53
TraesCS2D01G529100.1	Wheat	nucleus	34.1	20.43
TraesCS2B01G556700.1	Wheat	nucleus	34.1	20.43
TraesCS2A01G526400.1	Wheat	nucleus	34.1	20.43
Os04t0636900-02	Rice	nucleus	33.77	20.0
EES12939	Sorghum	nucleus	34.43	19.92
Zm00001d026397_P001	Maize	nucleus, plasma membrane	33.77	19.77
Zm00001d002141_P006	Maize	nucleus	33.77	19.77
EES10068	Sorghum	nucleus	27.87	19.72
Bra030265.1-P	Field mustard	nucleus	23.28	19.4
Bra016445.1-P	Field mustard	nucleus	12.79	15.12
Bra012254.1-P	Field mustard	nucleus	11.8	14.94
Bra025852.1-P	Field mustard	nucleus	12.46	14.56
HORVU2Hr1G116230.1	Barley	nucleus	19.34	14.53
Bra007096.1-P	Field mustard	nucleus	11.8	13.9
Bra039380.1-P	Field mustard	nucleus	16.39	13.81
Bra024547.1-P	Field mustard	nucleus	10.49	13.39
Bra012350.1-P	Field mustard	nucleus	10.82	13.25
Bra003651.1-P	Field mustard	nucleus	11.48	12.92
Bra031385.1-P	Field mustard	nucleus	12.13	12.76
Bra029612.1-P	Field mustard	nucleus	11.8	12.54
Bra012321.1-P	Field mustard	nucleus	11.48	12.11
Bra040031.1-P	Field mustard	nucleus	18.03	11.32
Bra010757.1-P	Field mustard	nucleus	14.1	11.26
Bra004508.1-P	Field mustard	nucleus	11.48	11.22
Bra021850.1-P	Field mustard	nucleus	13.44	11.17
Bra010203.1-P	Field mustard	nucleus	11.15	11.15
Bra001228.1-P	Field mustard	cytosol	13.11	11.05
Bra040485.1-P	Field mustard	nucleus	11.8	11.04
Bra001267.1-P	Field mustard	nucleus	17.05	11.04
Bra025568.1-P	Field mustard	nucleus	19.34	10.83
Bra029681.1-P	Field mustard	nucleus	17.38	10.58
Bra015741.1-P	Field mustard	nucleus, plastid, vacuole	10.49	10.26
Bra005496.1-P	Field mustard	nucleus	12.46	10.11
Bra022938.1-P	Field mustard	nucleus	13.44	10.05
Bra021062.1-P	Field mustard	nucleus	12.79	9.95
Bra028973.1-P	Field mustard	nucleus	14.1	9.93
Bra017802.1-P	Field mustard	nucleus	13.11	9.8
Bra026413.1-P	Field mustard	nucleus	13.44	9.69
Bra027860.1-P	Field mustard	cytosol, nucleus, peroxisome	11.48	9.62
Bra017475.1-P	Field mustard	nucleus	13.44	9.6
Bra024928.1-P	Field mustard	nucleus	13.11	9.52
Bra019094.1-P	Field mustard	nucleus	14.43	9.5
Bra022145.1-P	Field mustard	nucleus	13.44	8.91

Protein Annotations

EnsemblPlants:Bra014667.1	EnsemblPlants:Bra014667.1-P	EnsemblPlantsGene:Bra014667	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf	PANTHER:PTHR44578	PANTHER:PTHR44578:SF1
SEG:seg	SUPFAM:SSF54928	UniParc:UPI0002544773	UniProt:M4DDU8	MapMan:35.1	:

Description

AT3G56860 (E=5e-033) UBA2A | UBP1 interacting protein 2a (UBA2a)

Coordinates

chrA04:+:2107705..2108755

Molecular Weight (calculated)

33086.6 Da

IEP (calculated)

6.080

GRAVY (calculated)

-0.677

Length

305 amino acids

Sequence
(BLAST)

001: MIYTITKKRE LEPSNDEEQI ETNDQVNQAN GDPGEDEPIQ DLLEPFSKEQ LLDLLKQAAN NHPDVANRIR EVADEDPSHR KIFVHGLGWD TTTETLIEAF
101: NQHGEIESRS GARNALKQPQ KKIGSRMTSC QFACKGPVVE GLSVEHTQRK IYVSNVGAEL DPERLLAFFS RFGEEPHKTF EGHVLHCQKA VDGPKQGKQQ
201: QFDTPSHNNP RYGAPGGFVA GNQAGMGAPA QGVDPAIGQA LTALLVSQGA GLGFNPALGQ AWLGSFGTHS MSPGAIPNYQ TPPLGQGGKG RGQHGFGQYS
301: PYMSH

Best Arabidopsis Sequence Match ( AT3G56860.9 )
(BLAST)

001: MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH

Arabidopsis Description

UBA2AUBP1-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LES2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.