Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
20408568
plasma membrane: 27341663 |
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02736 | Sorghum | plastid | 90.97 | 89.01 |
| TraesCS3D01G186500.1 | Wheat | nucleus | 70.26 | 66.46 |
| TraesCS3B01G211700.1 | Wheat | nucleus | 66.3 | 66.45 |
| TraesCS3A01G181900.1 | Wheat | nucleus | 69.82 | 66.04 |
| HORVU3Hr1G037280.1 | Barley | nucleus, plastid | 68.72 | 63.93 |
| Os01t0265800-01 | Rice | nucleus | 68.06 | 63.06 |
| CDX76015 | Canola | nucleus | 33.7 | 50.16 |
| Bra014667.1-P | Field mustard | nucleus | 33.48 | 49.84 |
| CDY27186 | Canola | nucleus | 48.46 | 49.0 |
| Bra007277.1-P | Field mustard | nucleus | 48.24 | 48.78 |
| CDX72106 | Canola | nucleus | 48.24 | 48.13 |
| VIT_08s0056g00690.t01 | Wine grape | nucleus | 48.02 | 47.08 |
| CDY06947 | Canola | nucleus | 44.27 | 46.74 |
| KRG94993 | Soybean | nucleus | 49.12 | 46.56 |
| Solyc01g008970.2.1 | Tomato | nucleus | 38.55 | 46.54 |
| KRH66628 | Soybean | nucleus | 49.78 | 46.5 |
| Bra016954.1-P | Field mustard | nucleus | 44.49 | 45.91 |
| AT3G56860.10 | Thale cress | nucleus | 48.24 | 45.82 |
| CDY57580 | Canola | nucleus | 44.49 | 45.6 |
| AT2G41060.3 | Thale cress | nucleus | 45.15 | 45.45 |
| PGSC0003DMT400058431 | Potato | nucleus | 46.92 | 43.47 |
| KRH14673 | Soybean | nucleus | 45.81 | 42.11 |
| VIT_06s0009g01180.t01 | Wine grape | mitochondrion, nucleus, plastid | 48.02 | 42.08 |
| KRH73477 | Soybean | nucleus | 45.37 | 41.53 |
| CDY47382 | Canola | golgi, plastid | 33.48 | 36.54 |
| Zm00001d044469_P003 | Maize | nucleus | 30.84 | 31.32 |
| Zm00001d011336_P002 | Maize | nucleus | 30.18 | 30.58 |
| Zm00001d002141_P006 | Maize | nucleus | 33.26 | 28.98 |
| Zm00001d026397_P001 | Maize | nucleus, plasma membrane | 33.26 | 28.98 |
| Zm00001d052212_P001 | Maize | nucleus | 9.69 | 27.33 |
| Zm00001d034200_P001 | Maize | nucleus | 8.59 | 22.81 |
| Zm00001d030579_P001 | Maize | mitochondrion | 16.08 | 20.98 |
| Zm00001d036966_P001 | Maize | nucleus, plasma membrane | 18.5 | 20.34 |
| Zm00001d046190_P001 | Maize | extracellular | 18.28 | 19.86 |
| Zm00001d016349_P002 | Maize | nucleus | 16.08 | 19.01 |
| Zm00001d042641_P001 | Maize | nucleus | 12.11 | 18.64 |
| Zm00001d034201_P001 | Maize | nucleus | 9.91 | 17.93 |
| Zm00001d036789_P001 | Maize | cytosol, mitochondrion, nucleus | 10.79 | 17.56 |
| Zm00001d052820_P001 | Maize | extracellular, mitochondrion, plasma membrane | 14.76 | 17.49 |
| Zm00001d019084_P002 | Maize | nucleus | 17.18 | 17.18 |
| Zm00001d011885_P008 | Maize | cytosol | 13.22 | 16.67 |
| Zm00001d037209_P001 | Maize | plastid | 12.11 | 16.57 |
| Zm00001d018103_P002 | Maize | plasma membrane | 11.45 | 16.35 |
| Zm00001d019079_P001 | Maize | cytosol | 16.08 | 16.29 |
| Zm00001d007772_P001 | Maize | nucleus | 16.08 | 16.26 |
| Zm00001d012238_P003 | Maize | nucleus, plasma membrane, plastid | 12.11 | 16.18 |
| Zm00001d047753_P001 | Maize | cytosol, mitochondrion, nucleus | 9.91 | 16.13 |
| Zm00001d028714_P001 | Maize | cytosol, nucleus, plasma membrane | 10.35 | 15.82 |
| Zm00001d006704_P002 | Maize | nucleus | 16.74 | 15.7 |
| Zm00001d032739_P001 | Maize | nucleus | 14.76 | 15.12 |
| Zm00001d042042_P001 | Maize | nucleus | 10.57 | 14.12 |
| Zm00001d014058_P002 | Maize | plastid | 14.98 | 14.11 |
| Zm00001d007839_P001 | Maize | cytosol | 11.45 | 14.05 |
| Zm00001d018730_P001 | Maize | nucleus | 11.45 | 13.9 |
| Zm00001d046716_P001 | Maize | nucleus | 11.01 | 13.89 |
| Zm00001d019086_P001 | Maize | nucleus | 16.08 | 13.72 |
| Zm00001d021950_P007 | Maize | endoplasmic reticulum, nucleus | 16.3 | 13.68 |
| Zm00001d017829_P002 | Maize | plastid | 10.35 | 13.62 |
| Zm00001d053572_P002 | Maize | cytosol | 16.3 | 13.48 |
| Zm00001d051627_P002 | Maize | plastid | 10.13 | 12.5 |
| Zm00001d042133_P003 | Maize | cytosol | 10.57 | 12.06 |
Protein Annotations
| EntrezGene:100283567 | Gene3D:3.30.70.330 | MapMan:35.1 | UniProt:A0A096S6K6 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf |
| ProteinID:ONM31201.1 | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR44578 | PANTHER:PTHR44578:SF4 | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0002210C0E | EnsemblPlantsGene:Zm00001d040344 | EnsemblPlants:Zm00001d040344_P001 |
| EnsemblPlants:Zm00001d040344_T001 | SEG:seg | : | : | : | : |
Description
UBP1-associated protein 2A
Coordinates
chr3:+:39045836..39049419
Molecular Weight (calculated)
46625.3 Da
IEP (calculated)
5.874
GRAVY (calculated)
-0.247
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKRKLEPK SAAGFTPVKA SPTTRSATAK AAGLSEVLAP VEATMEKLPQ GAGGEDVEEI EEVEVEEEVE VEEEEEGESD QASIQALLDS FPKDQLVELL
101: RDAAIAHGDV LTTIRRVADA DPAQRKIFVH GLGWDTTTDT LTEAFGPYGE IEDLKVVTDR NTGKCKGYGF ILFRHRSGAR AALREPQKKI GNRSTACQLA
201: SVGPVPGGAP NSAAPAPVQL QLPPVSEYTQ RKIFVSNVGA DIDPQKLLQF FARFGEIEEG PLGLDKVTGK PKGFALFVYK TIESAKKALE EPHKHFEGVM
301: LHCQKAIDGP KPNKLGGAGG FFGAGASSGG KGFAGYGATS HSLPGTVGIV QPMSPLAPGL ASLPGGISAA PGVDPALGQA LTALLATQQG GGLSFNSILG
401: VGANGSGLPP QGPTGALGGS SVQGMQGGYM GGYGGSGGYG GASSGGPGRH YMGH
101: RDAAIAHGDV LTTIRRVADA DPAQRKIFVH GLGWDTTTDT LTEAFGPYGE IEDLKVVTDR NTGKCKGYGF ILFRHRSGAR AALREPQKKI GNRSTACQLA
201: SVGPVPGGAP NSAAPAPVQL QLPPVSEYTQ RKIFVSNVGA DIDPQKLLQF FARFGEIEEG PLGLDKVTGK PKGFALFVYK TIESAKKALE EPHKHFEGVM
301: LHCQKAIDGP KPNKLGGAGG FFGAGASSGG KGFAGYGATS HSLPGTVGIV QPMSPLAPGL ASLPGGISAA PGVDPALGQA LTALLATQQG GGLSFNSILG
401: VGANGSGLPP QGPTGALGGS SVQGMQGGYM GGYGGSGGYG GASSGGPGRH YMGH
001: MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
Arabidopsis Description
UBA2AUBP1-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LES2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.