Factsheet for Bra007277.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27186	Canola	nucleus	98.44	98.44
CDX72106	Canola	nucleus	97.77	96.48
AT3G56860.10	Thale cress	nucleus	84.86	79.71
Bra014667.1-P	Field mustard	nucleus	49.89	73.44
Bra016954.1-P	Field mustard	nucleus	64.37	65.68
KRG94993	Soybean	nucleus	61.25	57.41
VIT_08s0056g00690.t01	Wine grape	nucleus	58.57	56.8
KRH66628	Soybean	nucleus	60.8	56.17
GSMUA_Achr6P15950_001	Banana	nucleus	50.78	48.93
Zm00001d040344_P001	Maize	extracellular, plasma membrane	48.78	48.24
EES02736	Sorghum	plastid	47.66	46.12
TraesCS3B01G211700.1	Wheat	nucleus	44.99	44.59
TraesCS3D01G186500.1	Wheat	nucleus	47.44	44.38
TraesCS3A01G181900.1	Wheat	nucleus	47.22	44.17
Os01t0265800-01	Rice	nucleus	47.88	43.88
HORVU3Hr1G037280.1	Barley	nucleus, plastid	47.22	43.44
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	38.98	40.32
HORVU6Hr1G054690.5	Barley	plastid	14.25	34.04
GSMUA_Achr10P...	Banana	nucleus	17.37	33.77
Bra039664.1-P	Field mustard	nucleus	30.96	33.49
Bra038113.1-P	Field mustard	nucleus	30.73	33.33
GSMUA_AchrUn_...	Banana	nucleus	31.85	33.33
HORVU2Hr1G116150.4	Barley	nucleus	30.51	33.09
GSMUA_Achr4P09210_001	Banana	nucleus	32.52	33.03
Bra031230.1-P	Field mustard	nucleus	21.83	31.92
Os04t0636900-02	Rice	nucleus	36.3	31.65
Os02t0602600-00	Rice	nucleus	27.17	31.61
TraesCS2D01G529100.1	Wheat	nucleus	35.63	31.43
TraesCS2A01G526400.1	Wheat	nucleus	35.63	31.43
Zm00001d002141_P006	Maize	nucleus	36.3	31.29
TraesCS2B01G556700.1	Wheat	nucleus	35.41	31.24
KXG30578	Sorghum	nucleus	25.84	31.18
Bra035441.1-P	Field mustard	mitochondrion, nucleus, plastid	5.35	30.77
EES12939	Sorghum	nucleus	35.86	30.55
Zm00001d026397_P001	Maize	nucleus, plasma membrane	34.97	30.13
EES10068	Sorghum	nucleus	26.28	27.38
Bra030265.1-P	Field mustard	nucleus	21.83	26.78
HORVU2Hr1G116230.1	Barley	nucleus	21.83	24.14
Bra016445.1-P	Field mustard	nucleus	12.92	22.48
Bra012254.1-P	Field mustard	nucleus	12.03	22.41
Bra025852.1-P	Field mustard	nucleus	12.69	21.84
Bra039380.1-P	Field mustard	nucleus	17.37	21.55
Bra024547.1-P	Field mustard	nucleus	10.69	20.08
Bra007096.1-P	Field mustard	nucleus	11.58	20.08
Bra012350.1-P	Field mustard	nucleus	10.91	19.68
Bra003651.1-P	Field mustard	nucleus	11.58	19.19
Bra010757.1-P	Field mustard	nucleus	16.04	18.85
Bra031385.1-P	Field mustard	nucleus	11.8	18.28
Bra021850.1-P	Field mustard	nucleus	14.48	17.71
Bra012321.1-P	Field mustard	nucleus	11.36	17.65
Bra005496.1-P	Field mustard	nucleus	14.48	17.29
Bra021062.1-P	Field mustard	nucleus	14.7	16.84
Bra022938.1-P	Field mustard	nucleus	14.92	16.42
Bra010203.1-P	Field mustard	nucleus	11.14	16.39
Bra004508.1-P	Field mustard	nucleus	11.14	16.03
Bra025568.1-P	Field mustard	nucleus	19.15	15.78
Bra001267.1-P	Field mustard	nucleus	16.48	15.71
Bra040031.1-P	Field mustard	nucleus	16.93	15.64
Bra027860.1-P	Field mustard	cytosol, nucleus, peroxisome	12.47	15.38
Bra017802.1-P	Field mustard	nucleus	13.81	15.2
Bra040485.1-P	Field mustard	nucleus	10.91	15.03
Bra017475.1-P	Field mustard	nucleus	14.25	14.99
Bra029612.1-P	Field mustard	nucleus	9.58	14.98
Bra026413.1-P	Field mustard	nucleus	14.03	14.89
Bra024928.1-P	Field mustard	nucleus	13.81	14.76
Bra019094.1-P	Field mustard	nucleus	15.14	14.69
Bra029681.1-P	Field mustard	nucleus	16.26	14.57
Bra001228.1-P	Field mustard	cytosol	11.58	14.36
Bra028973.1-P	Field mustard	nucleus	13.81	14.32
Bra015741.1-P	Field mustard	nucleus, plastid, vacuole	9.8	14.1
Bra022145.1-P	Field mustard	nucleus	14.25	13.91

Protein Annotations

Gene3D:3.30.70.330	MapMan:35.1	EnsemblPlantsGene:Bra007277	EnsemblPlants:Bra007277.1	EnsemblPlants:Bra007277.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677
UniProt:M4CST5	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFscan:PS50102	PANTHER:PTHR44578	PANTHER:PTHR44578:SF1
InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54928	UniParc:UPI0002542C11	SEG:seg

Description

AT3G56860 (E=5e-150) UBA2A | UBP1 interacting protein 2a (UBA2a)

Coordinates

chrA09:-:28318310..28319659

Molecular Weight (calculated)

47877.9 Da

IEP (calculated)

5.462

GRAVY (calculated)

-0.665

Length

449 amino acids

Sequence
(BLAST)

001: MTKKRKLEAQ LSEASEPSEK QIAINNEVKQ EVEYEEVEEE HEDDDDNDEE EENDNRMVVA ATSGSGNLDD DDDEPIQDLL EPFSKEQLLN LLKEAAEKHH
101: DVANRIREVA DEDPVHRKIF VHGLGWDTKT ETLIEAFKEY GEIEDCKAVF DKVSGKSKGY GFILFKSRSG ARNALKQPQK KIGSRMTACQ LASKGPVFGG
201: NNPVAAAGAS IAPAQHSNSE HTQKKIYVSN VGAELDPQKL LAFFSKFGEI EEGPLGLDKY TGRPKGFCLF VYKSAESAKK ALEEPHKSFE GHILHCQKAI
301: DGPKPGKPQQ FNNNPRFQRN DNSGGYGTPA GHGHLMAGNQ AGMGAPVQAM NPAIGQALTA LLASQGGLAF NPAIGQALLG SLGAAGGVNP GAGVGMPTGY
401: GTQPMTPGSI PGYGGQPGLQ GGYQTPPPGQ GGAGRGQHGV GHYSSYMGQ

Best Arabidopsis Sequence Match ( AT3G56860.9 )
(BLAST)

001: MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH

Arabidopsis Description

UBA2AUBP1-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LES2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.