Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30578 | Sorghum | nucleus | 53.72 | 27.15 |
| Os02t0602600-00 | Rice | nucleus | 53.72 | 26.17 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 39.89 | 17.28 |
| Solyc01g008970.2.1 | Tomato | nucleus | 32.98 | 16.49 |
| CDY06947 | Canola | nucleus | 35.11 | 15.35 |
| Bra016954.1-P | Field mustard | nucleus | 35.11 | 15.0 |
| HORVU3Hr1G053990.1 | Barley | nucleus | 35.11 | 14.97 |
| HORVU7Hr1G036900.1 | Barley | cytosol, plastid | 5.32 | 14.93 |
| CDY57580 | Canola | nucleus | 35.11 | 14.9 |
| HORVU2Hr1G116150.4 | Barley | nucleus | 32.45 | 14.73 |
| AT2G41060.3 | Thale cress | nucleus | 35.11 | 14.63 |
| CDY27186 | Canola | nucleus | 34.04 | 14.25 |
| Bra007277.1-P | Field mustard | nucleus | 34.04 | 14.25 |
| CDX72106 | Canola | nucleus | 34.04 | 14.07 |
| VIT_08s0056g00690.t01 | Wine grape | nucleus | 34.04 | 13.82 |
| HORVU6Hr1G070150.1 | Barley | plastid | 12.23 | 13.77 |
| Bra014667.1-P | Field mustard | nucleus | 22.34 | 13.77 |
| HORVU3Hr1G037280.1 | Barley | nucleus, plastid | 35.64 | 13.73 |
| CDX76015 | Canola | nucleus | 21.81 | 13.44 |
| AT3G56860.10 | Thale cress | nucleus | 33.51 | 13.18 |
| KRG94993 | Soybean | nucleus | 33.51 | 13.15 |
| KRH14673 | Soybean | nucleus | 34.04 | 12.96 |
| PGSC0003DMT400058431 | Potato | nucleus | 33.51 | 12.86 |
| HORVU6Hr1G070140.3 | Barley | plastid | 10.64 | 12.82 |
| KRH66628 | Soybean | nucleus | 32.98 | 12.76 |
| KRH73477 | Soybean | nucleus | 33.51 | 12.7 |
| VIT_06s0009g01180.t01 | Wine grape | mitochondrion, nucleus, plastid | 34.57 | 12.55 |
| HORVU2Hr1G116230.1 | Barley | nucleus | 25.0 | 11.58 |
| HORVU1Hr1G057660.1 | Barley | cytosol | 20.74 | 10.71 |
| HORVU3Hr1G105930.10 | Barley | cytoskeleton, cytosol, nucleus | 20.74 | 10.51 |
| HORVU7Hr1G060930.1 | Barley | plasma membrane | 19.15 | 10.17 |
| HORVU7Hr1G036920.2 | Barley | mitochondrion, nucleus | 15.96 | 10.03 |
| HORVU7Hr1G093450.6 | Barley | nucleus | 15.43 | 9.86 |
| CDY47382 | Canola | golgi, plastid | 21.81 | 9.86 |
| HORVU6Hr1G078060.1 | Barley | plastid | 16.49 | 9.81 |
| HORVU4Hr1G063360.1 | Barley | nucleus | 13.83 | 9.49 |
| HORVU5Hr1G098440.5 | Barley | cytosol, nucleus | 18.09 | 9.39 |
| HORVU7Hr1G087550.1 | Barley | nucleus | 19.68 | 9.27 |
| HORVU2Hr1G061380.2 | Barley | nucleus | 18.09 | 9.14 |
| HORVU6Hr1G070170.1 | Barley | mitochondrion, nucleus, plastid | 14.89 | 8.43 |
| HORVU0Hr1G008280.1 | Barley | nucleus | 20.74 | 8.42 |
| HORVU6Hr1G040220.5 | Barley | plastid | 20.21 | 8.19 |
| HORVU3Hr1G110370.1 | Barley | cytosol, mitochondrion, nucleus | 12.23 | 7.35 |
| HORVU4Hr1G057110.23 | Barley | nucleus | 11.7 | 7.1 |
| HORVU1Hr1G039790.1 | Barley | nucleus | 17.02 | 6.27 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G054690.5 | EnsemblPlantsGene:HORVU6Hr1G054690 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| PANTHER:PTHR44678 | PANTHER:PTHR44678:SF1 | PFAM:PF00076 | PFscan:PS50102 | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI000B47739F | UniProt:A0A287U8A6 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:346601973..346610217
Molecular Weight (calculated)
20377.2 Da
IEP (calculated)
8.729
GRAVY (calculated)
-0.247
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: VGSIHTSAAL AAAFVPFGVL DECHAVAHRT TGPCRCCGFI TFRRRPSARC ALADSSKRVG ARPAPCQFTS TCPTGPFPGG SGRKILVDRV PARTSINDLR
101: WFFPEFGEIE AGSLVADHAT GQFRGYATFL YKSPEGIAKA LEEPRKVFDG CEFHCRHAQM QTKRNCATAD PEDTGYQRNV TRAAALPI
101: WFFPEFGEIE AGSLVADHAT GQFRGYATFL YKSPEGIAKA LEEPRKVFDG CEFHCRHAQM QTKRNCATAD PEDTGYQRNV TRAAALPI
001: MTKKRKLESE SNETSEPTEK QQQQCEKEDP EIRNVDNQRD DDEQVVEQDT LKEMHEEEAK GEDNIEAETS SGSGNQGNED DDEEEPIEDL LEPFSKDQLL
101: ILLKEAAERH RDVANRIRIV ADEDLVHRKI FVHGLGWDTK ADSLIDAFKQ YGEIEDCKCV VDKVSGQSKG YGFILFKSRS GARNALKQPQ KKIGTRMTAC
201: QLASIGPVQG NPVVAPAQHF NPENVQRKIY VSNVSADIDP QKLLEFFSRF GEIEEGPLGL DKATGRPKGF ALFVYRSLES AKKALEEPHK TFEGHVLHCH
301: KANDGPKQVK QHQHNHNSHN QNSRYQRNDN NGYGAPGGHG HFIAGNNQAV QAFNPAIGQA LTALLASQGA GLGLNQAFGQ ALLGTLGTAS PGAVGGMPSG
401: YGTQANISPG VYPGYGAQAG YQGGYQTQQP GQGGAGRGQH GAGYGGPYMG R
101: ILLKEAAERH RDVANRIRIV ADEDLVHRKI FVHGLGWDTK ADSLIDAFKQ YGEIEDCKCV VDKVSGQSKG YGFILFKSRS GARNALKQPQ KKIGTRMTAC
201: QLASIGPVQG NPVVAPAQHF NPENVQRKIY VSNVSADIDP QKLLEFFSRF GEIEEGPLGL DKATGRPKGF ALFVYRSLES AKKALEEPHK TFEGHVLHCH
301: KANDGPKQVK QHQHNHNSHN QNSRYQRNDN NGYGAPGGHG HFIAGNNQAV QAFNPAIGQA LTALLASQGA GLGLNQAFGQ ALLGTLGTAS PGAVGGMPSG
401: YGTQANISPG VYPGYGAQAG YQGGYQTQQP GQGGAGRGQH GAGYGGPYMG R
Arabidopsis Description
UBA2BUBP1-associated protein 2B [Source:UniProtKB/Swiss-Prot;Acc:O80678]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.