Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30578 | Sorghum | nucleus | 30.39 | 35.22 |
| OQU90054 | Sorghum | cytosol, mitochondrion, nucleus | 5.34 | 29.11 |
| CDX76015 | Canola | nucleus | 20.42 | 28.85 |
| Bra014667.1-P | Field mustard | nucleus | 19.72 | 27.87 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 27.38 | 27.19 |
| CDY06947 | Canola | nucleus | 26.91 | 26.98 |
| Bra016954.1-P | Field mustard | nucleus | 26.91 | 26.36 |
| Solyc01g008970.2.1 | Tomato | nucleus | 22.97 | 26.33 |
| CDY27186 | Canola | nucleus | 27.38 | 26.28 |
| Bra007277.1-P | Field mustard | nucleus | 27.38 | 26.28 |
| CDX72106 | Canola | nucleus | 27.38 | 25.93 |
| KRG94993 | Soybean | nucleus | 28.77 | 25.89 |
| CDY57580 | Canola | nucleus | 26.45 | 25.73 |
| KRH66628 | Soybean | nucleus | 28.31 | 25.1 |
| AT2G41060.3 | Thale cress | nucleus | 25.99 | 24.83 |
| AT3G56860.10 | Thale cress | nucleus | 26.68 | 24.06 |
| VIT_08s0056g00690.t01 | Wine grape | nucleus | 25.52 | 23.76 |
| EES02736 | Sorghum | plastid | 25.29 | 23.49 |
| PGSC0003DMT400058431 | Potato | nucleus | 25.75 | 22.65 |
| EES03272 | Sorghum | nucleus | 23.2 | 22.47 |
| EES12939 | Sorghum | nucleus | 27.38 | 22.39 |
| VIT_06s0009g01180.t01 | Wine grape | mitochondrion, nucleus, plastid | 25.52 | 21.24 |
| KRH14673 | Soybean | nucleus | 24.13 | 21.05 |
| KRH73477 | Soybean | nucleus | 24.13 | 20.97 |
| CDY47382 | Canola | golgi, plastid | 19.72 | 20.43 |
| KXG34100 | Sorghum | cytosol | 13.69 | 16.39 |
| KXG30724 | Sorghum | plastid | 11.6 | 16.13 |
| OQU85520 | Sorghum | nucleus, plastid | 10.67 | 15.59 |
| EES01849 | Sorghum | nucleus | 9.28 | 15.27 |
| OQU76075 | Sorghum | plastid | 12.06 | 14.73 |
| EER90058 | Sorghum | plastid | 9.51 | 14.34 |
| EER95824 | Sorghum | cytosol | 11.6 | 13.12 |
| EES01076 | Sorghum | nucleus | 10.21 | 12.61 |
| EER95048 | Sorghum | cytosol, nucleus, plastid | 8.58 | 11.94 |
| OQU81002 | Sorghum | nucleus | 9.05 | 11.64 |
| OQU83904 | Sorghum | nucleus | 12.06 | 11.56 |
| EER98147 | Sorghum | nucleus | 12.06 | 11.48 |
| EER97452 | Sorghum | nucleus | 12.53 | 11.46 |
| EER96020 | Sorghum | nucleus | 12.06 | 11.43 |
| EES02078 | Sorghum | nucleus | 8.58 | 10.95 |
| KXG37469 | Sorghum | cytosol | 7.66 | 10.89 |
| EES06526 | Sorghum | nucleus | 9.28 | 10.23 |
| KXG38359 | Sorghum | nucleus | 10.44 | 9.93 |
| EER88542 | Sorghum | nucleus | 9.51 | 9.9 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EntrezGene:8066695 | UniProt:C5Y5W9 | EnsemblPlants:EES10068 | ProteinID:EES10068 |
| ProteinID:EES10068.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR44578 | PANTHER:PTHR44578:SF3 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | EnsemblPlantsGene:SORBI_3005G179400 | SUPFAM:SSF54928 | UniParc:UPI0001A86A8A |
| RefSeq:XP_002451080.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:66190371..66192680
Molecular Weight (calculated)
43777.1 Da
IEP (calculated)
10.599
GRAVY (calculated)
-0.097
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKRKKGRA AKEPRKNHHL HPHSCSRPSI STREHKRRDP APGTGSGSGS ESDPSLPSTS DAVRRLIDPY SKPRLIAILA EAATANPALR ARLGAAAAAS
101: PSHRQLFVHG LPPHADSAAL AEAFSRFGPL ADCHAIADHR ASGRCCKGYG FVSFASRAAA RHAVREAPRV TVAGRPVSVQ FASAGPDPSG GGGAGAAGRR
201: VYVTNVAPDA SAERLRAFFA RFGELEGGPF GFDGDTGYAR FGELEGGYAL FVYQAAAGAA KAVQEPYRVF EGRTLHCQLA NEPAAARKTK APVAPPPAVV
301: AASAAGTPPR LQSVLDAAAA AGVVDLASYA RDPAQAAALL GQNPALAAAA LSTALASGDA TTIPLTPAAV SVPMEVALAS PKPATAVTVA PSPVMVGVRP
401: SGGPGLLGAY KPPSLLMVSS SSGRKGILMG T
101: PSHRQLFVHG LPPHADSAAL AEAFSRFGPL ADCHAIADHR ASGRCCKGYG FVSFASRAAA RHAVREAPRV TVAGRPVSVQ FASAGPDPSG GGGAGAAGRR
201: VYVTNVAPDA SAERLRAFFA RFGELEGGPF GFDGDTGYAR FGELEGGYAL FVYQAAAGAA KAVQEPYRVF EGRTLHCQLA NEPAAARKTK APVAPPPAVV
301: AASAAGTPPR LQSVLDAAAA AGVVDLASYA RDPAQAAALL GQNPALAAAA LSTALASGDA TTIPLTPAAV SVPMEVALAS PKPATAVTVA PSPVMVGVRP
401: SGGPGLLGAY KPPSLLMVSS SSGRKGILMG T
001: MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
Arabidopsis Description
UBA2AUBP1-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LES2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.