Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018103_P002 | Maize | plasma membrane | 91.29 | 88.99 |
| TraesCS6D01G297300.1 | Wheat | plastid | 62.58 | 62.18 |
| HORVU6Hr1G078060.1 | Barley | plastid | 62.9 | 61.71 |
| TraesCS6B01G348100.1 | Wheat | plastid | 60.97 | 60.77 |
| Os02t0755400-01 | Rice | plastid | 33.87 | 59.66 |
| GSMUA_Achr9P14920_001 | Banana | plastid | 31.29 | 54.8 |
| GSMUA_Achr3P06540_001 | Banana | nucleus, plastid | 28.06 | 54.72 |
| GSMUA_Achr8P23460_001 | Banana | nucleus | 35.81 | 47.03 |
| AT5G53720.1 | Thale cress | cytosol | 14.52 | 45.0 |
| OQU76075 | Sorghum | plastid | 50.0 | 43.91 |
| GSMUA_Achr5P05400_001 | Banana | mitochondrion | 36.77 | 43.18 |
| TraesCS6A01G318100.1 | Wheat | nucleus | 62.9 | 40.04 |
| CDY51790 | Canola | cytosol | 13.55 | 39.25 |
| CDY28822 | Canola | cytosol, nucleus, plastid | 13.87 | 38.39 |
| KRH53608 | Soybean | nucleus | 29.03 | 36.59 |
| EER90058 | Sorghum | plastid | 33.23 | 36.01 |
| Solyc04g082770.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 27.74 | 35.68 |
| EES01849 | Sorghum | nucleus | 30.0 | 35.5 |
| OQU90054 | Sorghum | cytosol, mitochondrion, nucleus | 8.71 | 34.18 |
| PGSC0003DMT400025900 | Potato | nucleus | 31.29 | 33.8 |
| KRH64318 | Soybean | nucleus | 27.42 | 33.07 |
| AT5G53680.1 | Thale cress | cytosol | 17.74 | 32.54 |
| OQU85520 | Sorghum | nucleus, plastid | 30.97 | 32.54 |
| AT5G11412.1 | Thale cress | endoplasmic reticulum | 17.74 | 31.43 |
| EER95048 | Sorghum | cytosol, nucleus, plastid | 28.39 | 28.39 |
| EES02078 | Sorghum | nucleus | 29.68 | 27.22 |
| Bra029612.1-P | Field mustard | nucleus | 16.45 | 17.77 |
| AT3G06970.1 | Thale cress | nucleus | 16.45 | 16.09 |
| CDY05301 | Canola | nucleus | 17.42 | 15.38 |
| CDY24657 | Canola | nucleus | 16.77 | 15.29 |
| CDY08023 | Canola | nucleus | 17.1 | 14.72 |
| EES03272 | Sorghum | nucleus | 20.65 | 14.38 |
| Bra001228.1-P | Field mustard | cytosol | 16.13 | 13.81 |
| EES01076 | Sorghum | nucleus | 15.48 | 13.75 |
| CDX74070 | Canola | cytosol | 15.81 | 13.61 |
| EER95824 | Sorghum | cytosol | 16.45 | 13.39 |
| EES06526 | Sorghum | nucleus | 16.45 | 13.04 |
| KXG37469 | Sorghum | cytosol | 12.58 | 12.87 |
| EER88542 | Sorghum | nucleus | 16.45 | 12.32 |
| KXG34100 | Sorghum | cytosol | 14.19 | 12.22 |
| EER98147 | Sorghum | nucleus | 17.74 | 12.14 |
| KXG30578 | Sorghum | nucleus | 14.52 | 12.1 |
| EER96020 | Sorghum | nucleus | 17.74 | 12.09 |
| EES10068 | Sorghum | nucleus | 16.13 | 11.6 |
| KXG38359 | Sorghum | nucleus | 16.77 | 11.48 |
| EER97452 | Sorghum | nucleus | 17.42 | 11.46 |
| EES02736 | Sorghum | plastid | 16.45 | 10.99 |
| OQU83904 | Sorghum | nucleus | 15.16 | 10.44 |
| EES12939 | Sorghum | nucleus | 17.42 | 10.25 |
| OQU81002 | Sorghum | nucleus | 10.32 | 9.55 |
Protein Annotations
| EnsemblPlants:KXG30724 | EnsemblPlantsGene:SORBI_3004G230900 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| PANTHER:PTHR44828 | PFAM:PF00076 | PFscan:PS50102 | ProteinID:KXG30724 | ProteinID:KXG30724.1 | SEG:seg |
| SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0007F2297A | UniProt:A0A194YR69 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr4:-:58026487..58033140
Molecular Weight (calculated)
33115.3 Da
IEP (calculated)
8.381
GRAVY (calculated)
-0.778
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSSSSGP GGSPAHAPPG GGGGSGGPHN HRSRFGDTTL TKVFVGGLAW ETPSEGLRQH FEVYGEILEA VVITDRETGR SKGYGFVIFR DPDAAARAVQ
101: NPNPVIAGRR ANCNIAAFGP PRAAQHPRGG RGGAGRGPHV PDQQPQGSPY RMPSQMTAPQ AATVFYNPHQ YGYWYPPDYP YQQALYNSQV LQHYYPQMYG
201: PASPSGPPYQ YMGYMPGGPS PRTGFSPMQQ PMRPPFFQQP PAQMDGSFPP GPSLPPNFRL QLPPHAVSRE SDDVSGSQSA QPTSSTPATI TNNQEDSRPV
301: VSDSDPNTPN
101: NPNPVIAGRR ANCNIAAFGP PRAAQHPRGG RGGAGRGPHV PDQQPQGSPY RMPSQMTAPQ AATVFYNPHQ YGYWYPPDYP YQQALYNSQV LQHYYPQMYG
201: PASPSGPPYQ YMGYMPGGPS PRTGFSPMQQ PMRPPFFQQP PAQMDGSFPP GPSLPPNFRL QLPPHAVSRE SDDVSGSQSA QPTSSTPATI TNNQEDSRPV
301: VSDSDPNTPN
001: MSNTSYYRSP FGDTTHTKVF VGGLAWETPT DEMRRYFDQF GEILEAVIIT DKATGKSKGY GFVTFRDSDS ATRAVADPNP VIDGRKANCN IASFGRPRPS
101: TPRGRGQGGS PSQYQGGGQS SYTGMAAPVQ QAAAAQLMYP SYGYTYNSEY GYHQALYNAQ LQQAQYYQQQ MYGGGGATSP SSSNIMPSPY YYLQAPSPRP
201: YLHHQQHYQY HHHQQQQQQQ QQRLPSASSY LIYPSNVEAP TPSNVPTSQG PLSSSTESHA PQQVSEEGGE FDPTDAPEST TTNIRDLTSS S
101: TPRGRGQGGS PSQYQGGGQS SYTGMAAPVQ QAAAAQLMYP SYGYTYNSEY GYHQALYNAQ LQQAQYYQQQ MYGGGGATSP SSSNIMPSPY YYLQAPSPRP
201: YLHHQQHYQY HHHQQQQQQQ QQRLPSASSY LIYPSNVEAP TPSNVPTSQG PLSSSTESHA PQQVSEEGGE FDPTDAPEST TTNIRDLTSS S
Arabidopsis Description
RNA-binding (RRM/RBD/RNP motifs) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LME7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.