Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g060580.1.1 | Tomato | cytosol | 36.53 | 84.64 |
| Solyc02g061720.1.1 | Tomato | cytosol | 38.79 | 81.36 |
| Solyc02g060600.1.1 | Tomato | cytosol | 31.73 | 80.07 |
| Solyc02g061610.1.1 | Tomato | cytosol | 54.58 | 77.71 |
| Solyc02g061670.1.1 | Tomato | cytosol | 38.22 | 77.21 |
| Solyc02g061680.1.1 | Tomato | cytosol | 52.19 | 76.6 |
| Solyc02g060590.1.1 | Tomato | cytosol | 14.39 | 76.12 |
| Solyc02g061710.1.1 | Tomato | nucleus | 26.09 | 75.51 |
| PGSC0003DMT400045106 | Potato | cytosol | 46.69 | 71.34 |
| Solyc02g061640.1.1 | Tomato | cytosol | 13.26 | 70.15 |
| Solyc02g082800.2.1 | Tomato | plastid | 35.97 | 46.11 |
| Solyc03g032160.2.1 | Tomato | plastid | 35.54 | 45.24 |
| KRH76549 | Soybean | cytosol | 29.76 | 39.0 |
| KRH07920 | Soybean | cytosol | 29.48 | 38.63 |
| KRH69678 | Soybean | nucleus | 29.34 | 38.17 |
| GSMUA_Achr1P14990_001 | Banana | cytosol | 29.76 | 38.09 |
| KRH28904 | Soybean | cytosol | 29.05 | 38.08 |
| VIT_04s0210g00220.t01 | Wine grape | cytosol, nucleus | 27.64 | 37.98 |
| Os03t0131300-01 | Rice | plasma membrane | 28.49 | 37.83 |
| GSMUA_Achr7P04060_001 | Banana | cytosol | 28.91 | 37.61 |
| GSMUA_Achr5P11110_001 | Banana | cytosol | 28.21 | 37.52 |
| GSMUA_Achr3P00530_001 | Banana | cytosol | 29.2 | 37.43 |
| TraesCS4B01G325900.2 | Wheat | cytosol | 27.79 | 37.03 |
| EER92919 | Sorghum | cytosol | 27.36 | 36.06 |
| HORVU4Hr1G082050.15 | Barley | cytosol | 26.94 | 35.77 |
| Zm00001d048343_P001 | Maize | cytosol | 26.8 | 35.65 |
| Zm00001d027514_P002 | Maize | cytosol | 26.8 | 35.45 |
| TraesCS1D01G206500.1 | Wheat | cytosol | 27.79 | 34.93 |
| TraesCS1B01G217000.1 | Wheat | cytosol | 27.93 | 34.86 |
| TraesCS1A01G203000.1 | Wheat | cytosol | 27.64 | 34.51 |
| TraesCS4D01G322800.1 | Wheat | cytosol | 27.64 | 34.51 |
| TraesCS5A01G498100.1 | Wheat | cytosol | 27.5 | 34.33 |
| Os10t0542200-01 | Rice | plasma membrane, plastid | 27.79 | 34.26 |
| Zm00001d047373_P001 | Maize | cytosol | 27.79 | 34.2 |
| HORVU1Hr1G052260.2 | Barley | cytosol | 27.22 | 33.8 |
| EER92003 | Sorghum | cytosol | 27.64 | 33.79 |
| GSMUA_Achr1P02760_001 | Banana | cytosol | 5.92 | 32.56 |
| Zm00001d029782_P004 | Maize | cytosol | 27.22 | 32.55 |
| GSMUA_Achr1P02770_001 | Banana | extracellular, plasma membrane, vacuole | 20.45 | 31.87 |
| KRH07807 | Soybean | cytosol, mitochondrion, nucleus | 1.97 | 20.9 |
Protein Annotations
| EnsemblPlants:Solyc02g060570.1.1 | EnsemblPlantsGene:Solyc02g060570.1 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquilin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | ncoils:Coil | PANTHER:PTHR10677 |
| PANTHER:PTHR10677:SF3 | PFAM:PF00240 | PFscan:PS50053 | SEG:seg | SMART:SM00213 | SUPFAM:SSF54236 |
| UniParc:UPI0002767CD1 | UniProt:K4B646 | MapMan:19.3.4.6 | : | : | : |
Description
No Description!
Coordinates
chr2:-:33006296..33020792
Molecular Weight (calculated)
76582.9 Da
IEP (calculated)
4.088
GRAVY (calculated)
-0.511
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGDTTQTV KDDSGDIAGG GETVTINIRC VNDSKLSVQV SLDSTVGLFK TVLSQPTDIP AEEQKVIYNG RILKDDQTLK SCGLEADHTV HLIRGFVAAA
101: FASATNVVNP NANQDAPRVG FPTTGGLFVR VSGGPLFSGL GSRGGSFGAG LQDFEQVQQH DSNMMREILN MPLVQDLVND PEIICNFIVN SPQMREYVNL
201: NPELPHIFND PAIFLQIWEA ARNELMHETI RTIQWSLSHT ESSPEEFNML RHMYENVEEP FQNATSMAGD TRNDSGTNPF VDLLGAQEQG RNRSTNLPAN
301: GSDTTANPHA PNSNPLSDPW ASADFGGDQM NTAPRSNASR NIWGPSPGGL DDIADLQRML GGIPGASSEN QLIGYPSISQ IMQHINQIMG LDPNSDPGDM
401: MPNPELIHQL MSSGRMQEYQ VQQGPFPYLD QPQSNQEQDQ DEADETGLEA DYTVHLIQGS AAATSASATN VVNPNANQDA PMVGFPTTGG LFVRVSGGPL
501: FSGLGSRGGS FGAGLPDFEQ VQQHDSNMMR DIEYEQGKNR STNPPATGSD TTANPLAPNS NPLSDPWAPP DFGGAQMNTA PRSNASRNIL GPSPGGLDDI
601: ADLQRMLGGI PGASSENQLI GYPSISQIMQ HINQIMGLDP NSHRGDMMPN PELIHQLMSS KRMQEYLVQQ GLFPYLDQPQ SNQSLDYIGF FDSEEALIAV
701: EELEEDSGE
101: FASATNVVNP NANQDAPRVG FPTTGGLFVR VSGGPLFSGL GSRGGSFGAG LQDFEQVQQH DSNMMREILN MPLVQDLVND PEIICNFIVN SPQMREYVNL
201: NPELPHIFND PAIFLQIWEA ARNELMHETI RTIQWSLSHT ESSPEEFNML RHMYENVEEP FQNATSMAGD TRNDSGTNPF VDLLGAQEQG RNRSTNLPAN
301: GSDTTANPHA PNSNPLSDPW ASADFGGDQM NTAPRSNASR NIWGPSPGGL DDIADLQRML GGIPGASSEN QLIGYPSISQ IMQHINQIMG LDPNSDPGDM
401: MPNPELIHQL MSSGRMQEYQ VQQGPFPYLD QPQSNQEQDQ DEADETGLEA DYTVHLIQGS AAATSASATN VVNPNANQDA PMVGFPTTGG LFVRVSGGPL
501: FSGLGSRGGS FGAGLPDFEQ VQQHDSNMMR DIEYEQGKNR STNPPATGSD TTANPLAPNS NPLSDPWAPP DFGGAQMNTA PRSNASRNIL GPSPGGLDDI
601: ADLQRMLGGI PGASSENQLI GYPSISQIMQ HINQIMGLDP NSHRGDMMPN PELIHQLMSS KRMQEYLVQQ GLFPYLDQPQ SNQSLDYIGF FDSEEALIAV
701: EELEEDSGE
001: MGGEGDSSQP QSGEGEAVAV NIRCSNGTKF SVKTSLDSTV ESFKELVAQS SDVPANQQRL IYKGRILKDD QTLLSYGLQA DHTIHMVRGS APSSAPPPAP
101: AASQTTAPSV TRGVGSDNSS NLGGASPGES LFPGLGFNPL GGGNAMSGLF GAGLPDLVQT QQQLAQNPNM IRDMMNTPAI QNLMNNPEFM RSMIMNNPQM
201: RELVDRNPEL GHVLNDPSIL RQTLEAARNP ELMREMMRNT DRAMSNIESM PEGFNMLRRM YENVQEPLMN ATTMSGNAGN NTGSNPFAAL LGNQGVTTQG
301: SDASNNSSTP NAGTGTIPNA NPLPNPWGAT GGQTTAPGRT NVGGDARSPG LGGLGGLGSL GGLGGLGMLG ADSPLGATPD ASQLSQLLQN PAISQMMQSV
401: FSNPQYMNQL MSLNPQLRSM LDSNPQLREM MQNPDFLRQF SSPEMMQQMM TLQQSLSQNR NTASQDAGQT GAATGNNGGL DLLMNMFGSL GAGGLSGTNQ
501: SNVPPEERYA TQLQQLQEMG FYDRAENIRA LLATNGNVNA AVERLLGSIG Q
101: AASQTTAPSV TRGVGSDNSS NLGGASPGES LFPGLGFNPL GGGNAMSGLF GAGLPDLVQT QQQLAQNPNM IRDMMNTPAI QNLMNNPEFM RSMIMNNPQM
201: RELVDRNPEL GHVLNDPSIL RQTLEAARNP ELMREMMRNT DRAMSNIESM PEGFNMLRRM YENVQEPLMN ATTMSGNAGN NTGSNPFAAL LGNQGVTTQG
301: SDASNNSSTP NAGTGTIPNA NPLPNPWGAT GGQTTAPGRT NVGGDARSPG LGGLGGLGSL GGLGGLGMLG ADSPLGATPD ASQLSQLLQN PAISQMMQSV
401: FSNPQYMNQL MSLNPQLRSM LDSNPQLREM MQNPDFLRQF SSPEMMQQMM TLQQSLSQNR NTASQDAGQT GAATGNNGGL DLLMNMFGSL GAGGLSGTNQ
501: SNVPPEERYA TQLQQLQEMG FYDRAENIRA LLATNGNVNA AVERLLGSIG Q
Arabidopsis Description
DSK2BUbiquitin domain-containing protein DSK2b [Source:UniProtKB/Swiss-Prot;Acc:Q9SII8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.