Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g060590.1.1 | Tomato | cytosol | 92.54 | 92.54 |
| Solyc02g061720.1.1 | Tomato | cytosol | 73.13 | 28.99 |
| GSMUA_Achr1P02760_001 | Banana | cytosol | 23.88 | 24.81 |
| Solyc02g060580.1.1 | Tomato | cytosol | 47.01 | 20.59 |
| Solyc02g061680.1.1 | Tomato | cytosol | 70.9 | 19.67 |
| PGSC0003DMT400045106 | Potato | cytosol | 63.43 | 18.32 |
| Solyc02g061610.1.1 | Tomato | cytosol | 66.42 | 17.87 |
| Solyc02g060600.1.1 | Tomato | cytosol | 36.57 | 17.44 |
| Solyc02g061670.1.1 | Tomato | cytosol | 38.06 | 14.53 |
| Solyc02g060570.1.1 | Tomato | cytosol | 70.15 | 13.26 |
| Solyc03g032160.2.1 | Tomato | plastid | 49.25 | 11.85 |
| Solyc02g082800.2.1 | Tomato | plastid | 46.27 | 11.21 |
| VIT_04s0210g00220.t01 | Wine grape | cytosol, nucleus | 42.54 | 11.05 |
| KRH07920 | Soybean | cytosol | 44.03 | 10.91 |
| KRH69678 | Soybean | nucleus | 43.28 | 10.64 |
| KRH76549 | Soybean | cytosol | 41.04 | 10.17 |
| KRH28904 | Soybean | cytosol | 38.81 | 9.61 |
| GSMUA_Achr5P11110_001 | Banana | cytosol | 38.06 | 9.57 |
| GSMUA_Achr1P14990_001 | Banana | cytosol | 38.06 | 9.21 |
| Os03t0131300-01 | Rice | plasma membrane | 36.57 | 9.18 |
| EER92919 | Sorghum | cytosol | 36.57 | 9.11 |
| Zm00001d027514_P002 | Maize | cytosol | 35.82 | 8.96 |
| TraesCS4B01G325900.2 | Wheat | cytosol | 35.07 | 8.83 |
| Zm00001d048343_P001 | Maize | cytosol | 35.07 | 8.82 |
| Zm00001d047373_P001 | Maize | cytosol | 37.31 | 8.68 |
| GSMUA_Achr3P00530_001 | Banana | cytosol | 35.82 | 8.68 |
| GSMUA_Achr7P04060_001 | Banana | cytosol | 35.07 | 8.62 |
| EER92003 | Sorghum | cytosol | 36.57 | 8.45 |
| HORVU4Hr1G082050.15 | Barley | cytosol | 33.58 | 8.43 |
| HORVU1Hr1G052260.2 | Barley | cytosol | 35.82 | 8.41 |
| TraesCS1D01G206500.1 | Wheat | cytosol | 35.07 | 8.33 |
| TraesCS1B01G217000.1 | Wheat | cytosol | 35.07 | 8.27 |
| TraesCS1A01G203000.1 | Wheat | cytosol | 35.07 | 8.27 |
| TraesCS4D01G322800.1 | Wheat | cytosol | 34.33 | 8.1 |
| Zm00001d029782_P004 | Maize | cytosol | 35.82 | 8.09 |
| Os10t0542200-01 | Rice | plasma membrane, plastid | 34.33 | 8.0 |
| TraesCS5A01G498100.1 | Wheat | cytosol | 33.58 | 7.92 |
| KRH07807 | Soybean | cytosol, mitochondrion, nucleus | 2.99 | 5.97 |
| GSMUA_Achr1P02770_001 | Banana | extracellular, plasma membrane, vacuole | 15.67 | 4.62 |
| Solyc02g061710.1.1 | Tomato | nucleus | 1.49 | 0.82 |
Protein Annotations
| EnsemblPlants:Solyc02g061640.1.1 | EnsemblPlantsGene:Solyc02g061640.1 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquilin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR10677 | PANTHER:PTHR10677:SF38 |
| PFAM:PF00240 | PFscan:PS50053 | SEG:seg | SMART:SM00213 | SUPFAM:SSF54236 | UniParc:UPI0002767CD9 |
| UniProt:K4B654 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:33135703..33137370
Molecular Weight (calculated)
14160.7 Da
IEP (calculated)
5.074
GRAVY (calculated)
-0.081
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRGDTYQTV KDDSGDIAGG GETVTINIRC VNDFKLSVQV SLDSTIGLFK SILSQPADIP AKEQKVIYNG WILKDDQTLK SCGLEADHTV HLIRGSAAAA
101: SASATNVVNP NANQDAPRVA VPTTGGLFVR VGLF
101: SASATNVVNP NANQDAPRVA VPTTGGLFVR VGLF
001: MGGEGDSSQP QSGEGEAVAV NIRCSNGTKF SVKTSLDSTV ESFKELVAQS SDVPANQQRL IYKGRILKDD QTLLSYGLQA DHTIHMVRGS APSSAPPPAP
101: AASQTTAPSV TRGVGSDNSS NLGGASPGES LFPGLGFNPL GGGNAMSGLF GAGLPDLVQT QQQLAQNPNM IRDMMNTPAI QNLMNNPEFM RSMIMNNPQM
201: RELVDRNPEL GHVLNDPSIL RQTLEAARNP ELMREMMRNT DRAMSNIESM PEGFNMLRRM YENVQEPLMN ATTMSGNAGN NTGSNPFAAL LGNQGVTTQG
301: SDASNNSSTP NAGTGTIPNA NPLPNPWGAT GGQTTAPGRT NVGGDARSPG LGGLGGLGSL GGLGGLGMLG ADSPLGATPD ASQLSQLLQN PAISQMMQSV
401: FSNPQYMNQL MSLNPQLRSM LDSNPQLREM MQNPDFLRQF SSPEMMQQMM TLQQSLSQNR NTASQDAGQT GAATGNNGGL DLLMNMFGSL GAGGLSGTNQ
501: SNVPPEERYA TQLQQLQEMG FYDRAENIRA LLATNGNVNA AVERLLGSIG Q
101: AASQTTAPSV TRGVGSDNSS NLGGASPGES LFPGLGFNPL GGGNAMSGLF GAGLPDLVQT QQQLAQNPNM IRDMMNTPAI QNLMNNPEFM RSMIMNNPQM
201: RELVDRNPEL GHVLNDPSIL RQTLEAARNP ELMREMMRNT DRAMSNIESM PEGFNMLRRM YENVQEPLMN ATTMSGNAGN NTGSNPFAAL LGNQGVTTQG
301: SDASNNSSTP NAGTGTIPNA NPLPNPWGAT GGQTTAPGRT NVGGDARSPG LGGLGGLGSL GGLGGLGMLG ADSPLGATPD ASQLSQLLQN PAISQMMQSV
401: FSNPQYMNQL MSLNPQLRSM LDSNPQLREM MQNPDFLRQF SSPEMMQQMM TLQQSLSQNR NTASQDAGQT GAATGNNGGL DLLMNMFGSL GAGGLSGTNQ
501: SNVPPEERYA TQLQQLQEMG FYDRAENIRA LLATNGNVNA AVERLLGSIG Q
Arabidopsis Description
DSK2BUbiquitin domain-containing protein DSK2b [Source:UniProtKB/Swiss-Prot;Acc:Q9SII8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.