Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g061670.1.1 | Tomato | cytosol | 85.77 | 68.66 |
| Solyc02g060580.1.1 | Tomato | cytosol | 66.9 | 61.44 |
| Solyc02g061720.1.1 | Tomato | cytosol | 73.31 | 60.95 |
| Solyc02g061610.1.1 | Tomato | cytosol | 80.43 | 45.38 |
| Solyc02g061680.1.1 | Tomato | cytosol | 74.73 | 43.48 |
| PGSC0003DMT400045106 | Potato | cytosol | 67.62 | 40.95 |
| Solyc02g060590.1.1 | Tomato | cytosol | 17.79 | 37.31 |
| Solyc02g061640.1.1 | Tomato | cytosol | 17.44 | 36.57 |
| Solyc02g061710.1.1 | Tomato | nucleus | 30.96 | 35.51 |
| Solyc02g060570.1.1 | Tomato | cytosol | 80.07 | 31.73 |
| Solyc02g082800.2.1 | Tomato | plastid | 57.3 | 29.11 |
| Solyc03g032160.2.1 | Tomato | plastid | 55.16 | 27.83 |
| KRH69678 | Soybean | nucleus | 46.26 | 23.85 |
| KRH07920 | Soybean | cytosol | 45.91 | 23.84 |
| Os03t0131300-01 | Rice | plasma membrane | 44.84 | 23.6 |
| TraesCS4B01G325900.2 | Wheat | cytosol | 44.48 | 23.5 |
| KRH76549 | Soybean | cytosol | 44.84 | 23.29 |
| GSMUA_Achr5P11110_001 | Banana | cytosol | 44.13 | 23.26 |
| Zm00001d027514_P002 | Maize | cytosol | 43.77 | 22.95 |
| EER92919 | Sorghum | cytosol | 43.77 | 22.86 |
| HORVU4Hr1G082050.15 | Barley | cytosol | 43.42 | 22.85 |
| GSMUA_Achr7P04060_001 | Banana | cytosol | 44.13 | 22.75 |
| KRH28904 | Soybean | cytosol | 43.77 | 22.74 |
| TraesCS1B01G217000.1 | Wheat | cytosol | 45.2 | 22.36 |
| TraesCS1A01G203000.1 | Wheat | cytosol | 45.2 | 22.36 |
| Zm00001d048343_P001 | Maize | cytosol | 42.35 | 22.33 |
| GSMUA_Achr3P00530_001 | Banana | cytosol | 43.77 | 22.24 |
| Zm00001d047373_P001 | Maize | cytosol | 45.55 | 22.22 |
| TraesCS1D01G206500.1 | Wheat | cytosol | 44.48 | 22.16 |
| TraesCS4D01G322800.1 | Wheat | cytosol | 44.48 | 22.01 |
| EER92003 | Sorghum | cytosol | 45.2 | 21.9 |
| HORVU1Hr1G052260.2 | Barley | cytosol | 44.48 | 21.89 |
| GSMUA_Achr1P14990_001 | Banana | cytosol | 43.06 | 21.84 |
| TraesCS5A01G498100.1 | Wheat | cytosol | 44.13 | 21.83 |
| Os10t0542200-01 | Rice | plasma membrane, plastid | 44.13 | 21.57 |
| Zm00001d029782_P004 | Maize | cytosol | 45.2 | 21.42 |
| VIT_04s0210g00220.t01 | Wine grape | cytosol, nucleus | 38.08 | 20.74 |
| GSMUA_Achr1P02770_001 | Banana | extracellular, plasma membrane, vacuole | 33.1 | 20.44 |
| GSMUA_Achr1P02760_001 | Banana | cytosol | 6.76 | 14.73 |
| KRH07807 | Soybean | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc02g060600.1.1 | EnsemblPlantsGene:Solyc02g060600.1 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquilin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR10677 | PANTHER:PTHR10677:SF39 |
| PFAM:PF00240 | PFscan:PS50053 | SEG:seg | SUPFAM:SSF54236 | UniParc:UPI0002767CD4 | UniProt:K4B649 |
| MapMan:19.3.4.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:33072080..33074298
Molecular Weight (calculated)
30559.6 Da
IEP (calculated)
4.311
GRAVY (calculated)
-0.509
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGDTYQTV KDDSGDIAGG GETPTDIPAE EQKVIYNGWI LKDDQTLKSC GLEADHTVHL IRDSAAAASA SATNVVNPNV NQDAPRVAVP TTGGLFVRVG
101: GGPRLGSKGG SFGAGLPDFE QVQQHDSNMM REILNMPLVQ DLVNDPEIIC NFIVNSPRMR EYVNLNPEIP HIFNDPAIFL QTWEAAYNEL MHETIRTIQW
201: PLSHTESSPE EFNMLRHMYE NVQEPFLNAT SMAGDTRNYS GTNPVMALLG AQEQGRNRST NPPATGSDTT ANPPAPNSNP L
101: GGPRLGSKGG SFGAGLPDFE QVQQHDSNMM REILNMPLVQ DLVNDPEIIC NFIVNSPRMR EYVNLNPEIP HIFNDPAIFL QTWEAAYNEL MHETIRTIQW
201: PLSHTESSPE EFNMLRHMYE NVQEPFLNAT SMAGDTRNYS GTNPVMALLG AQEQGRNRST NPPATGSDTT ANPPAPNSNP L
001: MGGEADSRQP LTAEGVAVAV NVRCSNGTKF SVTTSLDSTV ESFKELIAQN SDVPANQQRL IYKGRILKDD QTLLSYGLQA DHTVHMVRGF VPSSPSAPAA
101: NAGNQTTAPQ AVGSNDSSNL GGGESLFPGL GFNPLGGGNA MAGLFGSGLP DLEQAQQQLA QNPNMIREMM NTPAIQNLMN NPEFMRSMIM NNPQMRELVD
201: RNPELGHVLN DPSILRQTLE AARNPELMRE MMRNTDRAMS NIESMPEGFN MLRRMYENVQ EPLMNATTMS ENAGNNTSSN PFAALLGNQG VTTQGSDTSN
301: NISAPNAETG TPNANPLPNP WGATAGQTTA PGRTNAGLGG LGGLGGLGGL GMLGADSPLG ATPDASQLSQ ILQNPAMSQM MQSVLSNPQY MNQLMSLNPQ
401: LRSMLDMNPQ LREMMQNPDF LRQFSSPEMM QQMMSLQQSL FSQNRNTAGQ DPTQTGAATG TANNGGLDLL MNMFGSLGAG GLSGTNQPNV PPEERFATQL
501: QQLQEMGFYD RAENIRALLA TNGNVNAAVE RLLGSIGQ
101: NAGNQTTAPQ AVGSNDSSNL GGGESLFPGL GFNPLGGGNA MAGLFGSGLP DLEQAQQQLA QNPNMIREMM NTPAIQNLMN NPEFMRSMIM NNPQMRELVD
201: RNPELGHVLN DPSILRQTLE AARNPELMRE MMRNTDRAMS NIESMPEGFN MLRRMYENVQ EPLMNATTMS ENAGNNTSSN PFAALLGNQG VTTQGSDTSN
301: NISAPNAETG TPNANPLPNP WGATAGQTTA PGRTNAGLGG LGGLGGLGGL GMLGADSPLG ATPDASQLSQ ILQNPAMSQM MQSVLSNPQY MNQLMSLNPQ
401: LRSMLDMNPQ LREMMQNPDF LRQFSSPEMM QQMMSLQQSL FSQNRNTAGQ DPTQTGAATG TANNGGLDLL MNMFGSLGAG GLSGTNQPNV PPEERFATQL
501: QQLQEMGFYD RAENIRALLA TNGNVNAAVE RLLGSIGQ
Arabidopsis Description
DSK2AUbiquitin domain-containing protein DSK2a [Source:UniProtKB/Swiss-Prot;Acc:Q9SII9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.