Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g060600.1.1 | Tomato | cytosol | 61.44 | 66.9 |
| Solyc02g061670.1.1 | Tomato | cytosol | 72.88 | 63.53 |
| Solyc02g061720.1.1 | Tomato | cytosol | 65.69 | 59.47 |
| Solyc02g061610.1.1 | Tomato | cytosol | 83.33 | 51.2 |
| Solyc02g060590.1.1 | Tomato | cytosol | 22.22 | 50.75 |
| Solyc02g061680.1.1 | Tomato | cytosol | 77.45 | 49.07 |
| PGSC0003DMT400045106 | Potato | cytosol | 71.9 | 47.41 |
| Solyc02g061640.1.1 | Tomato | cytosol | 20.59 | 47.01 |
| Solyc02g061710.1.1 | Tomato | nucleus | 34.64 | 43.27 |
| Solyc02g060570.1.1 | Tomato | cytosol | 84.64 | 36.53 |
| Solyc02g082800.2.1 | Tomato | plastid | 55.23 | 30.56 |
| Solyc03g032160.2.1 | Tomato | plastid | 54.58 | 29.98 |
| KRH07920 | Soybean | cytosol | 48.04 | 27.17 |
| KRH69678 | Soybean | nucleus | 48.04 | 26.97 |
| KRH76549 | Soybean | cytosol | 47.39 | 26.8 |
| KRH28904 | Soybean | cytosol | 46.73 | 26.43 |
| Os03t0131300-01 | Rice | plasma membrane | 43.14 | 24.72 |
| TraesCS4B01G325900.2 | Wheat | cytosol | 42.48 | 24.44 |
| GSMUA_Achr5P11110_001 | Banana | cytosol | 42.16 | 24.2 |
| VIT_04s0210g00220.t01 | Wine grape | cytosol, nucleus | 40.52 | 24.03 |
| EER92919 | Sorghum | cytosol | 42.16 | 23.98 |
| HORVU4Hr1G082050.15 | Barley | cytosol | 41.83 | 23.97 |
| TraesCS1D01G206500.1 | Wheat | cytosol | 44.12 | 23.94 |
| Zm00001d048343_P001 | Maize | cytosol | 41.5 | 23.83 |
| TraesCS1B01G217000.1 | Wheat | cytosol | 44.12 | 23.77 |
| Zm00001d027514_P002 | Maize | cytosol | 41.5 | 23.69 |
| TraesCS1A01G203000.1 | Wheat | cytosol | 43.79 | 23.59 |
| GSMUA_Achr1P14990_001 | Banana | cytosol | 42.48 | 23.47 |
| GSMUA_Achr3P00530_001 | Banana | cytosol | 41.83 | 23.15 |
| TraesCS4D01G322800.1 | Wheat | cytosol | 42.81 | 23.06 |
| Os10t0542200-01 | Rice | plasma membrane, plastid | 43.14 | 22.96 |
| HORVU1Hr1G052260.2 | Barley | cytosol | 42.81 | 22.94 |
| Zm00001d047373_P001 | Maize | cytosol | 43.14 | 22.92 |
| TraesCS5A01G498100.1 | Wheat | cytosol | 42.48 | 22.89 |
| EER92003 | Sorghum | cytosol | 42.16 | 22.24 |
| GSMUA_Achr7P04060_001 | Banana | cytosol | 39.54 | 22.2 |
| Zm00001d029782_P004 | Maize | cytosol | 41.83 | 21.59 |
| GSMUA_Achr1P02760_001 | Banana | cytosol | 8.82 | 20.93 |
| GSMUA_Achr1P02770_001 | Banana | extracellular, plasma membrane, vacuole | 30.72 | 20.66 |
| KRH07807 | Soybean | cytosol, mitochondrion, nucleus | 1.96 | 8.96 |
Protein Annotations
| EnsemblPlants:Solyc02g060580.1.1 | EnsemblPlantsGene:Solyc02g060580.1 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquilin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR10677 | PANTHER:PTHR10677:SF39 |
| PFAM:PF00240 | PFscan:PS50053 | SEG:seg | SMART:SM00213 | SUPFAM:SSF54236 | UniParc:UPI0002767CD2 |
| UniProt:K4B647 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:33038328..33041129
Molecular Weight (calculated)
32914.3 Da
IEP (calculated)
4.341
GRAVY (calculated)
-0.441
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGDTTQTV KDNSVSLDST VGLFKSILSQ PTGIRAEEQK VIYNGRILKD DQTLKSCGLE ADHTVHLIRG SAATTSASAT NVVNPNANQD APRVAVPTTG
101: GLFVRVGGGP LFSELGSRGG LFGAGLPDFE QDLVNDPEII CNFIVNSPQM REYVNLNPEL PHIFNDPAIF LQIWEAARNE LMHETIRTIQ WSLSHTESSP
201: DEFNMLRHMY ENVEEPFLNA TSMEQGRNRS TNPPATGSDT TANPPGPDPN PVSDPWASAD FGGAQMNTAP RSNASRNIWG PSLGGLDDIA DLQRMLGGIP
301: GATSEN
101: GLFVRVGGGP LFSELGSRGG LFGAGLPDFE QDLVNDPEII CNFIVNSPQM REYVNLNPEL PHIFNDPAIF LQIWEAARNE LMHETIRTIQ WSLSHTESSP
201: DEFNMLRHMY ENVEEPFLNA TSMEQGRNRS TNPPATGSDT TANPPGPDPN PVSDPWASAD FGGAQMNTAP RSNASRNIWG PSLGGLDDIA DLQRMLGGIP
301: GATSEN
001: MGGEADSRQP LTAEGVAVAV NVRCSNGTKF SVTTSLDSTV ESFKELIAQN SDVPANQQRL IYKGRILKDD QTLLSYGLQA DHTVHMVRGF VPSSPSAPAA
101: NAGNQTTAPQ AVGSNDSSNL GGGESLFPGL GFNPLGGGNA MAGLFGSGLP DLEQAQQQLA QNPNMIREMM NTPAIQNLMN NPEFMRSMIM NNPQMRELVD
201: RNPELGHVLN DPSILRQTLE AARNPELMRE MMRNTDRAMS NIESMPEGFN MLRRMYENVQ EPLMNATTMS ENAGNNTSSN PFAALLGNQG VTTQGSDTSN
301: NISAPNAETG TPNANPLPNP WGATAGQTTA PGRTNAGLGG LGGLGGLGGL GMLGADSPLG ATPDASQLSQ ILQNPAMSQM MQSVLSNPQY MNQLMSLNPQ
401: LRSMLDMNPQ LREMMQNPDF LRQFSSPEMM QQMMSLQQSL FSQNRNTAGQ DPTQTGAATG TANNGGLDLL MNMFGSLGAG GLSGTNQPNV PPEERFATQL
501: QQLQEMGFYD RAENIRALLA TNGNVNAAVE RLLGSIGQ
101: NAGNQTTAPQ AVGSNDSSNL GGGESLFPGL GFNPLGGGNA MAGLFGSGLP DLEQAQQQLA QNPNMIREMM NTPAIQNLMN NPEFMRSMIM NNPQMRELVD
201: RNPELGHVLN DPSILRQTLE AARNPELMRE MMRNTDRAMS NIESMPEGFN MLRRMYENVQ EPLMNATTMS ENAGNNTSSN PFAALLGNQG VTTQGSDTSN
301: NISAPNAETG TPNANPLPNP WGATAGQTTA PGRTNAGLGG LGGLGGLGGL GMLGADSPLG ATPDASQLSQ ILQNPAMSQM MQSVLSNPQY MNQLMSLNPQ
401: LRSMLDMNPQ LREMMQNPDF LRQFSSPEMM QQMMSLQQSL FSQNRNTAGQ DPTQTGAATG TANNGGLDLL MNMFGSLGAG GLSGTNQPNV PPEERFATQL
501: QQLQEMGFYD RAENIRALLA TNGNVNAAVE RLLGSIGQ
Arabidopsis Description
DSK2AUbiquitin domain-containing protein DSK2a [Source:UniProtKB/Swiss-Prot;Acc:Q9SII9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.