Factsheet for Solyc02g061680.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g061610.1.1	Tomato	cytosol	84.47	81.93
Solyc02g060580.1.1	Tomato	cytosol	49.07	77.45
Solyc02g060590.1.1	Tomato	cytosol	21.33	76.87
Solyc02g060600.1.1	Tomato	cytosol	43.48	74.73
Solyc02g061720.1.1	Tomato	cytosol	51.97	74.26
Solyc02g061710.1.1	Tomato	nucleus	36.23	71.43
Solyc02g061640.1.1	Tomato	cytosol	19.67	70.9
Solyc02g061670.1.1	Tomato	cytosol	50.1	68.95
PGSC0003DMT400045106	Potato	cytosol	65.63	68.32
Solyc02g060570.1.1	Tomato	cytosol	76.6	52.19
Solyc02g082800.2.1	Tomato	plastid	49.07	42.86
Solyc03g032160.2.1	Tomato	plastid	49.28	42.73
KRH07920	Soybean	cytosol	42.86	38.26
KRH76549	Soybean	cytosol	42.86	38.26
KRH28904	Soybean	cytosol	42.03	37.52
KRH69678	Soybean	nucleus	42.24	37.43
GSMUA_Achr1P14990_001	Banana	cytosol	42.44	37.0
GSMUA_Achr5P11110_001	Banana	cytosol	39.96	36.21
Os03t0131300-01	Rice	plasma membrane	39.75	35.96
EER92919	Sorghum	cytosol	39.96	35.87
Zm00001d027514_P002	Maize	cytosol	39.54	35.63
VIT_04s0210g00220.t01	Wine grape	cytosol, nucleus	37.89	35.47
GSMUA_Achr3P00530_001	Banana	cytosol	40.58	35.44
GSMUA_Achr7P04060_001	Banana	cytosol	39.34	34.86
Zm00001d048343_P001	Maize	cytosol	38.3	34.71
TraesCS4B01G325900.2	Wheat	cytosol	37.68	34.21
TraesCS1D01G206500.1	Wheat	cytosol	38.72	33.16
HORVU4Hr1G082050.15	Barley	cytosol	36.65	33.15
TraesCS1B01G217000.1	Wheat	cytosol	38.92	33.1
HORVU1Hr1G052260.2	Barley	cytosol	38.92	32.92
TraesCS1A01G203000.1	Wheat	cytosol	38.72	32.92
Os10t0542200-01	Rice	plasma membrane, plastid	38.92	32.7
EER92003	Sorghum	cytosol	39.13	32.59
Zm00001d047373_P001	Maize	cytosol	38.3	32.12
TraesCS4D01G322800.1	Wheat	cytosol	37.47	31.87
TraesCS5A01G498100.1	Wheat	cytosol	37.47	31.87
GSMUA_Achr1P02770_001	Banana	extracellular, plasma membrane, vacuole	29.61	31.43
Zm00001d029782_P004	Maize	cytosol	37.68	30.69
GSMUA_Achr1P02760_001	Banana	cytosol	7.45	27.91
KRH07807	Soybean	cytosol, mitochondrion, nucleus	2.28	16.42

Protein Annotations

EnsemblPlants:Solyc02g061680.1.1	EnsemblPlantsGene:Solyc02g061680.1	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquilin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10677	PANTHER:PTHR10677:SF38
PFAM:PF00240	PFscan:PS50053	SEG:seg	SMART:SM00213	SUPFAM:SSF54236	UniParc:UPI0002767EAD
UniProt:K4B658	MapMan:19.3.4.6	:	:	:	:

Description

No Description!

Coordinates

chr2:-:33202286..33208541

Molecular Weight (calculated)

53450.7 Da

IEP (calculated)

4.366

GRAVY (calculated)

-0.479

Length

483 amino acids

Sequence
(BLAST)

001: MDGGDTYQTV KDDSVDIAGG GETVTINIRC VNDSKLSVQV SLDSTVGLFK SILSQPTDIP AEEQKVIYNG RILKDDQTLK SCGQEADHTV HLIRGSAAAA
101: SASGCCSHYR GLFVRVGGGP LFSRLGSRGG SFGAGLPDFE QVQQHDSNMM REILNMPLVQ DLVNDPEIIC NFIVNSPQMR EYVNLNPELP HIFNDPAIFL
201: QIWEAARNEL MHETIRTIQW SLSHTESSPE EFNMLRHMYE NVEDPFLNAT SMAGDTRNDS GTNPFVDILG AQEQGRNRST NPQATGSDTT ANPHAPNSNP
301: LSDPWASIDF GGAQMNTAPR SNTSRNIWGP SPGGLDDIAD LQRMLGGIPG ASFENQLKGY PSISQIMQHI NQIMRIDPNS YPGDMMPNTE LIHQLMSSKR
401: MQEYLVQQGL FPYLDQPQSN QEQDQDEADE TEYQNGAMEV ARNVVDSILE RPSLHEFPGL NNLGPEELYA MLFLQVVRLH QIL

Best Arabidopsis Sequence Match ( AT2G17200.1 )
(BLAST)

001: MGGEGDSSQP QSGEGEAVAV NIRCSNGTKF SVKTSLDSTV ESFKELVAQS SDVPANQQRL IYKGRILKDD QTLLSYGLQA DHTIHMVRGS APSSAPPPAP
101: AASQTTAPSV TRGVGSDNSS NLGGASPGES LFPGLGFNPL GGGNAMSGLF GAGLPDLVQT QQQLAQNPNM IRDMMNTPAI QNLMNNPEFM RSMIMNNPQM
201: RELVDRNPEL GHVLNDPSIL RQTLEAARNP ELMREMMRNT DRAMSNIESM PEGFNMLRRM YENVQEPLMN ATTMSGNAGN NTGSNPFAAL LGNQGVTTQG
301: SDASNNSSTP NAGTGTIPNA NPLPNPWGAT GGQTTAPGRT NVGGDARSPG LGGLGGLGSL GGLGGLGMLG ADSPLGATPD ASQLSQLLQN PAISQMMQSV
401: FSNPQYMNQL MSLNPQLRSM LDSNPQLREM MQNPDFLRQF SSPEMMQQMM TLQQSLSQNR NTASQDAGQT GAATGNNGGL DLLMNMFGSL GAGGLSGTNQ
501: SNVPPEERYA TQLQQLQEMG FYDRAENIRA LLATNGNVNA AVERLLGSIG Q

Arabidopsis Description

DSK2BUbiquitin domain-containing protein DSK2b [Source:UniProtKB/Swiss-Prot;Acc:Q9SII8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.