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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 3
  • nucleus 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G295700.3 Wheat plastid 69.83 94.53
TraesCS6B01G128900.2 Wheat plastid 91.21 92.09
Os08t0190200-00 Rice nucleus 77.91 74.21
KXG24662 Sorghum nucleus 78.38 72.37
Zm00001d049416_P001 Maize extracellular, nucleus 77.43 71.49
TraesCS2B01G495700.1 Wheat nucleus 73.16 70.64
HORVU7Hr1G066510.3 Barley plastid 73.16 70.48
KRH51075 Soybean endoplasmic reticulum 57.72 61.21
KRH20867 Soybean nucleus 59.38 61.12
KRH02082 Soybean nucleus 57.72 60.45
KRH11417 Soybean nucleus 58.67 60.1
PGSC0003DMT400029379 Potato nucleus 55.11 58.0
Solyc03g031720.2.1 Tomato nucleus 55.11 57.28
PGSC0003DMT400013036 Potato nucleus 54.39 57.25
Solyc10g005260.2.1 Tomato nucleus 55.82 57.18
AT1G11650.2 Thale cress nucleus 54.16 56.3
CDY34835 Canola nucleus 52.49 56.23
Solyc02g080420.2.1 Tomato extracellular, nucleus, plastid 54.87 55.93
PGSC0003DMT400042504 Potato nucleus 54.63 55.69
Bra031774.1-P Field mustard nucleus 51.54 55.08
TraesCS5B01G241400.1 Wheat nucleus 42.76 52.63
TraesCS2B01G247400.4 Wheat nucleus 54.87 49.78
TraesCS4B01G289600.1 Wheat nucleus 51.07 46.84
TraesCS2B01G335700.1 Wheat plastid 43.71 43.81
CDY34639 Canola nucleus, plastid, vacuole 52.26 43.39
TraesCS6B01G228100.1 Wheat endoplasmic reticulum, plastid, vacuole 42.76 39.47
TraesCS7B01G138700.1 Wheat mitochondrion, nucleus 23.52 22.15
TraesCS2B01G195400.1 Wheat nucleus 22.57 22.14
TraesCS4B01G148600.1 Wheat nucleus 20.43 19.33
TraesCS1B01G160900.1 Wheat nucleus 12.83 14.67
TraesCS2B01G378400.1 Wheat nucleus 22.8 14.44
TraesCS5B01G159400.1 Wheat cytosol 21.38 13.82
TraesCS7B01G182800.3 Wheat cytosol 21.85 13.63
TraesCS4B01G204800.1 Wheat cytosol 20.19 13.06
TraesCS3B01G090800.1 Wheat mitochondrion 16.63 11.2
TraesCS2B01G601400.1 Wheat nucleus 20.67 9.08
TraesCS2B01G599000.1 Wheat nucleus 20.43 8.84
TraesCS2B01G598800.1 Wheat nucleus 20.9 8.4
VIT_18s0001g10190.t01 Wine grape cytosol, mitochondrion 1.66 5.6
Protein Annotations
EnsemblPlants:TraesCS7B01G199000.1EnsemblPlantsGene:TraesCS7B01G199000Gene3D:3.30.70.330GO:GO:0003674GO:GO:0003676GO:GO:0005488
InterPro:IPR000504InterPro:IPR012677InterPro:Nucleotide-bd_a/b_plait_sfInterPro:RBD_domain_sfInterPro:RRM_domPANTHER:PTHR43955
PANTHER:PTHR43955:SF3PFAM:PF00076PFscan:PS50102SEG:segSMART:SM00360SUPFAM:SSF54928
TIGR:cd12344TIGR:cd12345TIGR:cd12346MapMan:16.9.4::
Description
No Description!
Coordinates
chr7B:+:356698756..356702504
Molecular Weight (calculated)
46085.4 Da
IEP (calculated)
6.783
GRAVY (calculated)
-0.502
Length
421 amino acids
Sequence
(BLAST)
001: MPQPQPGVAA PQWGAIPPPM PPHQLPAPQM WGQPLQPQQV AYGQAQPPPQ AAYYGRPAVP TQAPAGPNEV RTLWIGDLQY WMDENYVYNC FASTGEVQSV
101: KLIRDKQTGQ LQGYGFIEFT SHAGAERALQ TFNRAMMPNV EMAYRLNWAT AGEKRDDGAD YTIFVGDLAA DVTDYVLQET FRVQYPSVKG AKVVTDKLTM
201: RPKGYGFVKF GDPTEQTRAM TEMNGMLCSS RPMRIGPAAN KQKATGVQEK VLLAVPSSQG VQTDNDPSNS TVFVGGLEPN TTEDVLKQLF TPYGEVVHVK
301: IPVGKRCGFV QYASRSSAEE ALLMLQGTMI GGQNVRLSWG RSPSNKQVQS QQDFNQWGGA TANAGYYGYG QGYGAYGYAI QPQDSNMYGY GKYAGYPNYA
401: PQVAQQPQQE PVKSSLIVDA V
Best Arabidopsis Sequence Match ( AT1G11650.1 )
(BLAST)
001: MMQQPPPGGI LPHHAPPPSA QQQYGYQQPY GIAGAAPPPP QMWNPQAAAP PSVQPTTADE IRTLWIGDLQ YWMDENFLYG CFAHTGEMVS AKVIRNKQTG
101: QVEGYGFIEF ASHAAAERVL QTFNNAPIPS FPDQLFRLNW ASLSSGDKRD DSPDYTIFVG DLAADVTDYI LLETFRASYP SVKGAKVVID RVTGRTKGYG
201: FVRFSDESEQ IRAMTEMNGV PCSTRPMRIG PAASKKGVTG QRDSYQSSAA GVTTDNDPNN TTVFVGGLDA SVTDDHLKNV FSQYGEIVHV KIPAGKRCGF
301: VQFSEK
Arabidopsis Description
RBP45BRBP45B [Source:UniProtKB/TrEMBL;Acc:A0A178WLD6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.