Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30312 | Canola | nucleus | 77.27 | 76.23 |
| Bra040941.1-P | Field mustard | nucleus | 76.36 | 75.68 |
| CDY68376 | Canola | nucleus | 75.91 | 75.23 |
| Bra028099.1-P | Field mustard | nucleus | 70.45 | 70.45 |
| AT4G36740.2 | Thale cress | nucleus | 62.73 | 63.59 |
| Solyc02g085630.2.1 | Tomato | nucleus | 51.36 | 53.3 |
| Solyc02g062960.2.1 | Tomato | nucleus | 49.09 | 52.68 |
| KRH28621 | Soybean | nucleus | 51.36 | 52.56 |
| PGSC0003DMT400033036 | Potato | nucleus | 50.91 | 52.34 |
| KRH76853 | Soybean | nucleus | 50.91 | 52.34 |
| PGSC0003DMT400011464 | Potato | nucleus | 49.09 | 51.67 |
| VIT_04s0023g01330.t01 | Wine grape | nucleus | 49.09 | 51.18 |
| Solyc03g034120.2.1 | Tomato | nucleus | 47.27 | 50.49 |
| PGSC0003DMT400045834 | Potato | nucleus | 47.73 | 49.76 |
| PGSC0003DMT400050373 | Potato | nucleus | 37.27 | 49.7 |
| Solyc03g034110.2.1 | Tomato | nucleus | 47.27 | 48.83 |
| PGSC0003DMT400045855 | Potato | nucleus | 45.0 | 46.48 |
| KRH69950 | Soybean | nucleus | 44.09 | 45.75 |
| Solyc03g034150.1.1 | Tomato | nucleus | 41.82 | 45.54 |
| Solyc03g034130.2.1 | Tomato | nucleus | 46.36 | 45.54 |
| AT5G66700.1 | Thale cress | nucleus | 46.36 | 44.74 |
| GSMUA_Achr1P22640_001 | Banana | nucleus | 36.82 | 44.51 |
| GSMUA_Achr7P25990_001 | Banana | nucleus | 28.64 | 41.45 |
| PGSC0003DMT400045832 | Potato | nucleus | 43.18 | 40.95 |
| EER97443 | Sorghum | nucleus | 40.45 | 38.53 |
| GSMUA_Achr8P31170_001 | Banana | nucleus | 35.91 | 37.8 |
| Zm00001d006687_P001 | Maize | nucleus | 37.73 | 37.39 |
| Zm00001d021934_P001 | Maize | nucleus | 39.55 | 37.18 |
| Os07t0581700-01 | Rice | nucleus | 39.09 | 35.83 |
| TraesCS2B01G405700.1 | Wheat | nucleus | 35.91 | 35.75 |
| GSMUA_Achr4P07170_001 | Banana | nucleus | 32.27 | 35.32 |
| HORVU2Hr1G092300.1 | Barley | nucleus | 21.36 | 34.81 |
| TraesCS2D01G199200.1 | Wheat | nucleus | 36.36 | 33.61 |
| HORVU2Hr1G036680.2 | Barley | nucleus | 35.91 | 33.47 |
| TraesCS2B01G218800.1 | Wheat | nucleus | 35.91 | 33.19 |
| EER92693 | Sorghum | nucleus | 36.36 | 33.06 |
| Os03t0198600-01 | Rice | nucleus | 35.91 | 33.05 |
| TraesCS4A01G040600.1 | Wheat | nucleus | 34.55 | 32.9 |
| TraesCS2A01G188500.1 | Wheat | nucleus | 35.45 | 32.77 |
| HORVU4Hr1G070610.1 | Barley | nucleus | 33.64 | 32.31 |
| Zm00001d028129_P002 | Maize | nucleus, plastid | 35.0 | 32.22 |
| TraesCS4B01G261600.1 | Wheat | nucleus | 33.64 | 31.76 |
| TraesCS4D01G261600.1 | Wheat | nucleus | 33.64 | 31.62 |
| HORVU2Hr1G092290.6 | Barley | nucleus | 32.73 | 30.9 |
| TraesCS2D01G385500.1 | Wheat | nucleus | 34.55 | 30.77 |
| TraesCSU01G009800.1 | Wheat | nucleus | 33.64 | 30.33 |
| Zm00001d048172_P001 | Maize | nucleus | 31.82 | 29.91 |
| GSMUA_Achr4P14070_001 | Banana | plastid | 37.73 | 28.33 |
| AT1G27045.4 | Thale cress | nucleus | 26.36 | 23.02 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EntrezGene:816370 | ProteinID:AAD12212.1 | EMBL:AB493553 | ProteinID:AEC06780.1 |
| ArrayExpress:AT2G18550 | EnsemblPlantsGene:AT2G18550 | RefSeq:AT2G18550 | TAIR:AT2G18550 | RefSeq:AT2G18550-TAIR-G | EnsemblPlants:AT2G18550.1 |
| TAIR:AT2G18550.1 | EMBL:BT031362 | UniProt:C0SV50 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | Symbol:HB-2 | InterPro:HTH_motif | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | RefSeq:NP_179445.1 | PFAM:PF00046 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF281 | UniProt:Q9ZU70 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI00000A643E |
| SEG:seg | : | : | : | : | : |
Description
ATHB-21Homeobox-leucine zipper protein ATHB-21 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU70]
Coordinates
chr2:-:8049371..8051316
Molecular Weight (calculated)
25702.1 Da
IEP (calculated)
5.101
GRAVY (calculated)
-0.907
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNQNVDDHN LLLISQLYPN VYTPLVPQQG GEAKPTRRRK RKSKSVVVAE EGENEGNGWF RKRKLSDEQV RMLEISFEDD HKLESERKDR LASELGLDPR
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.