Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400050373 | Potato | nucleus | 56.44 | 69.09 |
| Solyc03g034120.2.1 | Tomato | nucleus | 53.96 | 52.91 |
| Solyc02g085630.2.1 | Tomato | nucleus | 51.49 | 49.06 |
| Solyc03g034110.2.1 | Tomato | nucleus | 51.49 | 48.83 |
| Solyc02g062960.2.1 | Tomato | nucleus | 48.02 | 47.32 |
| Solyc03g034130.2.1 | Tomato | nucleus | 51.98 | 46.88 |
| CDX75593 | Canola | nucleus | 48.51 | 45.16 |
| CDX69241 | Canola | nucleus | 47.03 | 43.78 |
| CDX72601 | Canola | nucleus | 47.03 | 43.78 |
| CDY67008 | Canola | nucleus | 35.64 | 43.64 |
| VIT_04s0023g01330.t01 | Wine grape | nucleus | 45.54 | 43.6 |
| CDY30312 | Canola | nucleus | 48.02 | 43.5 |
| KRH28621 | Soybean | nucleus | 46.04 | 43.26 |
| Bra040941.1-P | Field mustard | nucleus | 47.52 | 43.24 |
| CDY68376 | Canola | nucleus | 47.52 | 43.24 |
| KRH76853 | Soybean | nucleus | 45.54 | 42.99 |
| Bra017780.1-P | Field mustard | nucleus | 45.54 | 42.4 |
| AT4G36740.2 | Thale cress | nucleus | 45.05 | 41.94 |
| AT2G18550.1 | Thale cress | nucleus | 45.54 | 41.82 |
| Bra028099.1-P | Field mustard | nucleus | 45.05 | 41.36 |
| CDY35477 | Canola | nucleus | 44.55 | 40.91 |
| CDY24769 | Canola | nucleus | 44.06 | 40.45 |
| AT5G66700.1 | Thale cress | nucleus | 43.56 | 38.6 |
| CDY30761 | Canola | nucleus | 41.09 | 37.05 |
| CDY70377 | Canola | nucleus | 40.59 | 36.61 |
| Bra012093.1-P | Field mustard | nucleus | 40.59 | 36.61 |
| GSMUA_Achr1P22640_001 | Banana | nucleus | 32.67 | 36.26 |
| Bra010573.1-P | Field mustard | nucleus | 32.18 | 35.91 |
| KRH69950 | Soybean | nucleus | 37.62 | 35.85 |
| CDX81374 | Canola | nucleus | 39.6 | 35.71 |
| Bra031819.1-P | Field mustard | nucleus | 40.59 | 35.5 |
| CDY52162 | Canola | nucleus | 40.1 | 35.06 |
| CDY57132 | Canola | nucleus | 38.61 | 34.67 |
| Bra037154.1-P | Field mustard | nucleus | 38.61 | 34.67 |
| GSMUA_Achr7P25990_001 | Banana | nucleus | 25.74 | 34.21 |
| GSMUA_Achr4P07170_001 | Banana | nucleus | 32.67 | 32.84 |
| GSMUA_Achr8P31170_001 | Banana | nucleus | 32.67 | 31.58 |
| TraesCS2B01G405700.1 | Wheat | nucleus | 34.16 | 31.22 |
| HORVU2Hr1G092300.1 | Barley | nucleus | 20.79 | 31.11 |
| HORVU2Hr1G036680.2 | Barley | nucleus | 34.65 | 29.66 |
| TraesCS2B01G218800.1 | Wheat | nucleus | 34.65 | 29.41 |
| Zm00001d006687_P001 | Maize | nucleus | 32.18 | 29.28 |
| TraesCS2D01G199200.1 | Wheat | nucleus | 34.16 | 28.99 |
| TraesCS2A01G188500.1 | Wheat | nucleus | 34.16 | 28.99 |
| Os07t0581700-01 | Rice | nucleus | 34.16 | 28.75 |
| Zm00001d021934_P001 | Maize | nucleus | 32.67 | 28.21 |
| EER97443 | Sorghum | nucleus | 32.18 | 28.14 |
| Os03t0198600-01 | Rice | nucleus | 33.17 | 28.03 |
| TraesCS2D01G385500.1 | Wheat | nucleus | 33.17 | 27.13 |
| TraesCSU01G009800.1 | Wheat | nucleus | 32.67 | 27.05 |
| Zm00001d048172_P001 | Maize | nucleus | 31.19 | 26.92 |
| EER92693 | Sorghum | nucleus | 32.18 | 26.86 |
| Zm00001d028129_P002 | Maize | nucleus, plastid | 31.19 | 26.36 |
| HORVU2Hr1G092290.6 | Barley | nucleus | 30.2 | 26.18 |
| TraesCS4A01G040600.1 | Wheat | nucleus | 29.7 | 25.97 |
| HORVU4Hr1G070610.1 | Barley | nucleus | 29.21 | 25.76 |
| TraesCS4D01G261600.1 | Wheat | nucleus | 29.7 | 25.64 |
| TraesCS4B01G261600.1 | Wheat | nucleus | 28.71 | 24.89 |
| GSMUA_Achr4P14070_001 | Banana | plastid | 33.66 | 23.21 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:K4BFT7 |
| PFAM:PF00046 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF281 |
| SMART:SM00389 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc03g034150.1 | EnsemblPlants:Solyc03g034150.1.1 | UniParc:UPI0002767D86 | SEG:seg |
Description
No Description!
Coordinates
chr3:+:5843769..5845519
Molecular Weight (calculated)
23392.1 Da
IEP (calculated)
9.631
GRAVY (calculated)
-0.784
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHHQLDDHQ MVMISQYHPG INTQLALDHQ GEVKPSRRRK KNKGETSNNG VVRKRKLSQE QVNLLEHSFG DAHRLDMKTK AKLASELGLD LQQVAVWFQN
101: KRARWKNKKL EDEYSKLKSQ HEITIIEKCR LETQILKMKE QLSEAKKEIQ RLLLDTNCAR VSSNNNSPIT TSSSIISMEQ PYILENFGME GILMDNNVYF
201: GC
101: KRARWKNKKL EDEYSKLKSQ HEITIIEKCR LETQILKMKE QLSEAKKEIQ RLLLDTNCAR VSSNNNSPIT TSSSIISMEQ PYILENFGME GILMDNNVYF
201: GC
001: MNNQNVDDHN LLLISQLYPN VYTPLVPQQG GEAKPTRRRK RKSKSVVVAE EGENEGNGWF RKRKLSDEQV RMLEISFEDD HKLESERKDR LASELGLDPR
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM
Arabidopsis Description
ATHB-21Homeobox-leucine zipper protein ATHB-21 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU70]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.