Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52162 | Canola | nucleus | 92.12 | 65.8 |
| CDX81374 | Canola | nucleus | 75.76 | 55.8 |
| CDY30761 | Canola | nucleus | 75.76 | 55.8 |
| CDY70377 | Canola | nucleus | 75.15 | 55.36 |
| AT5G66700.1 | Thale cress | nucleus | 76.36 | 55.26 |
| CDY57132 | Canola | nucleus | 72.12 | 52.89 |
| GSMUA_Achr7P25990_001 | Banana | nucleus | 40.61 | 44.08 |
| CDX75593 | Canola | nucleus | 53.94 | 41.01 |
| PGSC0003DMT400033036 | Potato | nucleus | 52.73 | 40.65 |
| CDX69241 | Canola | nucleus | 53.33 | 40.55 |
| VIT_04s0023g01330.t01 | Wine grape | nucleus | 51.52 | 40.28 |
| Solyc02g085630.2.1 | Tomato | nucleus | 51.52 | 40.09 |
| KRH76853 | Soybean | nucleus | 51.52 | 39.72 |
| CDX72601 | Canola | nucleus | 52.12 | 39.63 |
| Solyc02g062960.2.1 | Tomato | nucleus | 49.09 | 39.51 |
| KRH28621 | Soybean | nucleus | 50.3 | 38.6 |
| GSMUA_Achr1P22640_001 | Banana | nucleus | 42.42 | 38.46 |
| CDY24769 | Canola | nucleus | 50.91 | 38.18 |
| Solyc03g034120.2.1 | Tomato | nucleus | 47.27 | 37.86 |
| PGSC0003DMT400011464 | Potato | nucleus | 47.88 | 37.8 |
| CDY35477 | Canola | nucleus | 50.3 | 37.73 |
| HORVU2Hr1G092300.1 | Barley | nucleus | 30.3 | 37.04 |
| PGSC0003DMT400045834 | Potato | nucleus | 47.27 | 36.97 |
| CDY68376 | Canola | nucleus | 49.09 | 36.49 |
| CDY30312 | Canola | nucleus | 49.09 | 36.32 |
| PGSC0003DMT400045855 | Potato | nucleus | 46.67 | 36.15 |
| Solyc03g034110.2.1 | Tomato | nucleus | 46.67 | 36.15 |
| Solyc03g034150.1.1 | Tomato | nucleus | 43.64 | 35.64 |
| KRH69950 | Soybean | nucleus | 45.45 | 35.38 |
| Solyc03g034130.2.1 | Tomato | nucleus | 46.67 | 34.38 |
| PGSC0003DMT400045832 | Potato | nucleus | 47.88 | 34.05 |
| PGSC0003DMT400050373 | Potato | nucleus | 33.94 | 33.94 |
| GSMUA_Achr8P31170_001 | Banana | nucleus | 41.82 | 33.01 |
| GSMUA_Achr4P07170_001 | Banana | nucleus | 39.39 | 32.34 |
| EER97443 | Sorghum | nucleus | 44.85 | 32.03 |
| Zm00001d021934_P001 | Maize | nucleus | 44.85 | 31.62 |
| Zm00001d006687_P001 | Maize | nucleus | 42.42 | 31.53 |
| Os03t0198600-01 | Rice | nucleus | 45.45 | 31.38 |
| HORVU4Hr1G070610.1 | Barley | nucleus | 43.03 | 31.0 |
| Os07t0581700-01 | Rice | nucleus | 44.85 | 30.83 |
| TraesCS2D01G199200.1 | Wheat | nucleus | 44.24 | 30.67 |
| HORVU2Hr1G036680.2 | Barley | nucleus | 43.64 | 30.51 |
| TraesCS2B01G218800.1 | Wheat | nucleus | 43.64 | 30.25 |
| TraesCS4B01G261600.1 | Wheat | nucleus | 42.42 | 30.04 |
| TraesCS4D01G261600.1 | Wheat | nucleus | 42.42 | 29.91 |
| TraesCS4A01G040600.1 | Wheat | nucleus | 41.82 | 29.87 |
| TraesCS2A01G188500.1 | Wheat | nucleus | 43.03 | 29.83 |
| Zm00001d028129_P002 | Maize | nucleus, plastid | 43.03 | 29.71 |
| Zm00001d048172_P001 | Maize | nucleus | 41.82 | 29.49 |
| EER92693 | Sorghum | nucleus | 43.03 | 29.34 |
| TraesCS2B01G405700.1 | Wheat | nucleus | 38.79 | 28.96 |
| TraesCS2D01G385500.1 | Wheat | nucleus | 40.0 | 26.72 |
| TraesCSU01G009800.1 | Wheat | nucleus | 39.39 | 26.64 |
| GSMUA_Achr4P14070_001 | Banana | plastid | 46.67 | 26.28 |
| HORVU2Hr1G092290.6 | Barley | nucleus | 36.36 | 25.75 |
| CDY16214 | Canola | nucleus | 32.73 | 23.58 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078JHB8 | UniProt:A0A078JHB8 | EnsemblPlants:CDY67008 | ProteinID:CDY67008 |
| ProteinID:CDY67008.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00057837001 |
| InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF00046 |
| PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF281 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0004EB57EF | SEG:seg | : | : | : |
Description
BnaCnng53110DBnaCnng53110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHB8]
Coordinates
chrLK035671:+:13..868
Molecular Weight (calculated)
19521.9 Da
IEP (calculated)
4.809
GRAVY (calculated)
-0.789
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRKRKLTDE QVTMLEYSFE NEHKLESGRK EKIAGELGLD PRQVAVWFQN RRARWKNKKL EEEYAKLKSQ HDSVVLGQCQ LESQVLKLTE QLSEAQNEIR
101: KLSERLVVQE TSTSSSSFSV EANDAPTDFE FSPMDTINYN IPLYMLDNNY YLQNMEYWDG LYVQF
101: KLSERLVVQE TSTSSSSFSV EANDAPTDFE FSPMDTINYN IPLYMLDNNY YLQNMEYWDG LYVQF
001: MNNQNVDDHN LLLISQLYPN VYTPLVPQQG GEAKPTRRRK RKSKSVVVAE EGENEGNGWF RKRKLSDEQV RMLEISFEDD HKLESERKDR LASELGLDPR
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM
Arabidopsis Description
ATHB-21Homeobox-leucine zipper protein ATHB-21 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU70]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.