Factsheet for Solyc03g034110.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045855	Potato	nucleus	86.39	86.39
Solyc03g034120.2.1	Tomato	nucleus	79.34	82.04
Solyc03g034130.2.1	Tomato	nucleus	84.98	80.8
Solyc02g085630.2.1	Tomato	nucleus	54.93	55.19
Solyc02g062960.2.1	Tomato	nucleus	51.64	53.66
VIT_04s0023g01330.t01	Wine grape	nucleus	51.17	51.66
Solyc03g034150.1.1	Tomato	nucleus	48.83	51.49
KRH28621	Soybean	nucleus	50.23	49.77
KRH76853	Soybean	nucleus	49.3	49.07
CDX75593	Canola	nucleus	48.36	47.47
AT2G18550.1	Thale cress	nucleus	48.83	47.27
CDY67008	Canola	nucleus	36.15	46.67
Bra017780.1-P	Field mustard	nucleus	46.95	46.08
CDX69241	Canola	nucleus	46.95	46.08
CDX72601	Canola	nucleus	46.95	46.08
AT4G36740.2	Thale cress	nucleus	46.01	45.16
Bra040941.1-P	Field mustard	nucleus	46.95	45.05
CDY68376	Canola	nucleus	46.48	44.59
CDY30312	Canola	nucleus	46.48	44.39
GSMUA_Achr7P25990_001	Banana	nucleus	31.46	44.08
CDY24769	Canola	nucleus	45.07	43.64
KRH69950	Soybean	nucleus	42.72	42.92
Bra028099.1-P	Field mustard	nucleus	44.13	42.73
GSMUA_Achr1P22640_001	Banana	nucleus	36.15	42.31
CDY35477	Canola	nucleus	43.66	42.27
CDY70377	Canola	nucleus	43.66	41.52
CDX81374	Canola	nucleus	43.66	41.52
Bra012093.1-P	Field mustard	nucleus	43.66	41.52
CDY57132	Canola	nucleus	43.66	41.33
Bra031819.1-P	Field mustard	nucleus	44.6	41.13
AT5G66700.1	Thale cress	nucleus	43.66	40.79
CDY52162	Canola	nucleus	44.13	40.69
CDY30761	Canola	nucleus	42.72	40.62
Bra037154.1-P	Field mustard	nucleus	42.72	40.44
Bra010573.1-P	Field mustard	nucleus	32.39	38.12
GSMUA_Achr8P31170_001	Banana	nucleus	37.09	37.8
GSMUA_Achr4P07170_001	Banana	nucleus	35.21	37.31
HORVU2Hr1G092300.1	Barley	nucleus	22.07	34.81
HORVU2Hr1G036680.2	Barley	nucleus	38.5	34.75
TraesCS2B01G405700.1	Wheat	nucleus	35.68	34.39
Zm00001d006687_P001	Maize	nucleus	35.68	34.23
EER97443	Sorghum	nucleus	37.09	34.2
Zm00001d021934_P001	Maize	nucleus	37.56	34.19
Os07t0581700-01	Rice	nucleus	38.03	33.75
TraesCS2A01G188500.1	Wheat	nucleus	37.56	33.61
TraesCS2D01G199200.1	Wheat	nucleus	36.62	32.77
TraesCS2B01G218800.1	Wheat	nucleus	36.15	32.35
Zm00001d048172_P001	Maize	nucleus	33.8	30.77
EER92693	Sorghum	nucleus	34.27	30.17
Os03t0198600-01	Rice	nucleus	33.8	30.13
HORVU2Hr1G092290.6	Barley	nucleus	32.86	30.04
Zm00001d028129_P002	Maize	nucleus, plastid	33.33	29.71
TraesCS2D01G385500.1	Wheat	nucleus	34.27	29.55
TraesCSU01G009800.1	Wheat	nucleus	33.8	29.51
HORVU4Hr1G070610.1	Barley	nucleus	31.46	29.26
TraesCS4B01G261600.1	Wheat	nucleus	31.46	28.76
TraesCS4D01G261600.1	Wheat	nucleus	31.46	28.63
TraesCS4A01G040600.1	Wheat	nucleus	30.99	28.57
GSMUA_Achr4P14070_001	Banana	plastid	36.62	26.62

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:K4BFT3
PFAM:PF00046	PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF281
SMART:SM00389	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc03g034110.2	EnsemblPlants:Solyc03g034110.2.1	UniParc:UPI0002767D82	SEG:seg

Description

No Description!

Coordinates

chr3:+:5814494..5815791

Molecular Weight (calculated)

25445.3 Da

IEP (calculated)

8.421

GRAVY (calculated)

-1.042

Length

213 amino acids

Sequence
(BLAST)

001: MKGNKVDDQM ELISHFYPQI YSQLAQQQEE TVKPRRRRKK HKDEGRDNTS EVVMRKRKLL SEEQVNLLER SFGDQHKLET ERKAKLASEL GLDPHQVAVW
101: FQNRRARWKN KKLEEEYSKL KTQHEDTIIE KYRLETEVLK MKDQLCEAKK KIERLLLERK IDISSNNSPT SSIFSMEQSH FNLGEFGMEG QLMDNNMLFI
201: ADYQSTYMTL WDD

Best Arabidopsis Sequence Match ( AT2G18550.1 )
(BLAST)

001: MNNQNVDDHN LLLISQLYPN VYTPLVPQQG GEAKPTRRRK RKSKSVVVAE EGENEGNGWF RKRKLSDEQV RMLEISFEDD HKLESERKDR LASELGLDPR
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM

Arabidopsis Description

ATHB-21Homeobox-leucine zipper protein ATHB-21 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU70]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.