Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040941.1-P | Field mustard | nucleus | 79.55 | 78.83 |
| AT2G18550.1 | Thale cress | nucleus | 70.45 | 70.45 |
| Bra017780.1-P | Field mustard | nucleus | 64.09 | 64.98 |
| Bra010573.1-P | Field mustard | nucleus | 47.73 | 58.01 |
| Solyc02g085630.2.1 | Tomato | nucleus | 52.73 | 54.72 |
| VIT_04s0023g01330.t01 | Wine grape | nucleus | 52.27 | 54.5 |
| PGSC0003DMT400011464 | Potato | nucleus | 50.45 | 53.11 |
| Solyc02g062960.2.1 | Tomato | nucleus | 49.09 | 52.68 |
| PGSC0003DMT400033036 | Potato | nucleus | 50.91 | 52.34 |
| KRH76853 | Soybean | nucleus | 49.09 | 50.47 |
| KRH28621 | Soybean | nucleus | 48.64 | 49.77 |
| Solyc03g034120.2.1 | Tomato | nucleus | 44.09 | 47.09 |
| PGSC0003DMT400045834 | Potato | nucleus | 44.09 | 45.97 |
| KRH69950 | Soybean | nucleus | 44.09 | 45.75 |
| GSMUA_Achr1P22640_001 | Banana | nucleus | 37.73 | 45.6 |
| Solyc03g034150.1.1 | Tomato | nucleus | 41.36 | 45.05 |
| PGSC0003DMT400050373 | Potato | nucleus | 33.64 | 44.85 |
| Solyc03g034110.2.1 | Tomato | nucleus | 42.73 | 44.13 |
| GSMUA_Achr7P25990_001 | Banana | nucleus | 30.0 | 43.42 |
| Solyc03g034130.2.1 | Tomato | nucleus | 43.64 | 42.86 |
| PGSC0003DMT400045855 | Potato | nucleus | 40.91 | 42.25 |
| Bra012093.1-P | Field mustard | nucleus | 41.82 | 41.07 |
| PGSC0003DMT400045832 | Potato | nucleus | 42.27 | 40.09 |
| Bra037154.1-P | Field mustard | nucleus | 40.91 | 40.0 |
| GSMUA_Achr8P31170_001 | Banana | nucleus | 36.82 | 38.76 |
| Os07t0581700-01 | Rice | nucleus | 41.82 | 38.33 |
| GSMUA_Achr4P07170_001 | Banana | nucleus | 35.0 | 38.31 |
| Bra031819.1-P | Field mustard | nucleus | 40.0 | 38.1 |
| TraesCS2B01G405700.1 | Wheat | nucleus | 38.18 | 38.01 |
| EER97443 | Sorghum | nucleus | 38.64 | 36.8 |
| TraesCS2D01G199200.1 | Wheat | nucleus | 39.55 | 36.55 |
| HORVU2Hr1G036680.2 | Barley | nucleus | 39.09 | 36.44 |
| Zm00001d021934_P001 | Maize | nucleus | 38.64 | 36.32 |
| TraesCS2A01G188500.1 | Wheat | nucleus | 39.09 | 36.13 |
| TraesCS2B01G218800.1 | Wheat | nucleus | 39.09 | 36.13 |
| Zm00001d006687_P001 | Maize | nucleus | 36.36 | 36.04 |
| Os03t0198600-01 | Rice | nucleus | 39.09 | 35.98 |
| Zm00001d028129_P002 | Maize | nucleus, plastid | 37.73 | 34.73 |
| EER92693 | Sorghum | nucleus | 38.18 | 34.71 |
| TraesCS2D01G385500.1 | Wheat | nucleus | 38.64 | 34.41 |
| HORVU2Hr1G092300.1 | Barley | nucleus | 20.91 | 34.07 |
| TraesCS4B01G261600.1 | Wheat | nucleus | 35.91 | 33.91 |
| HORVU4Hr1G070610.1 | Barley | nucleus | 35.0 | 33.62 |
| TraesCSU01G009800.1 | Wheat | nucleus | 37.27 | 33.61 |
| TraesCS4A01G040600.1 | Wheat | nucleus | 35.0 | 33.33 |
| TraesCS4D01G261600.1 | Wheat | nucleus | 35.45 | 33.33 |
| Bra024665.1-P | Field mustard | nucleus | 26.82 | 31.72 |
| Zm00001d048172_P001 | Maize | nucleus | 33.64 | 31.62 |
| GSMUA_Achr4P14070_001 | Banana | plastid | 40.91 | 30.72 |
| HORVU2Hr1G092290.6 | Barley | nucleus | 31.82 | 30.04 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EnsemblPlantsGene:Bra028099 | EnsemblPlants:Bra028099.1 | EnsemblPlants:Bra028099.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:M4EH34 | PFAM:PF00046 | PRINTS:PR00031 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF281 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI00025427FD |
| SEG:seg | : | : | : | : | : |
Description
AT2G18550 (E=5e-082) HB-2, ATHB21 | HB-2 (HOMEOBOX-2); DNA binding / transcription factor
Coordinates
chrA09:-:18279451..18280918
Molecular Weight (calculated)
25659.2 Da
IEP (calculated)
6.158
GRAVY (calculated)
-0.862
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNQNVNDNN LLLISRMYPN VYASSVPQQV DSKPVRPRRR RKSKNVEMAQ EGGDGSNGWF RKRKLSDEQV RMLEMSFGLE HKLESERKNR LASELGLDSR
101: QVAVWFQNRR ARWKNKRLED EYTKLKNEHE NVVVQKCHLD SEVLHLKEQL YDAEIEIQRL AQRVEGALSN SPISTSISVE ANLTTPFFGD YQIGDDGEGY
201: ENLFYSPEYI DGLEWMSQLM
101: QVAVWFQNRR ARWKNKRLED EYTKLKNEHE NVVVQKCHLD SEVLHLKEQL YDAEIEIQRL AQRVEGALSN SPISTSISVE ANLTTPFFGD YQIGDDGEGY
201: ENLFYSPEYI DGLEWMSQLM
001: MNNQNVDDHN LLLISQLYPN VYTPLVPQQG GEAKPTRRRK RKSKSVVVAE EGENEGNGWF RKRKLSDEQV RMLEISFEDD HKLESERKDR LASELGLDPR
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM
Arabidopsis Description
ATHB-21Homeobox-leucine zipper protein ATHB-21 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU70]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.