Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011464 | Potato | nucleus | 93.66 | 91.87 |
| Solyc02g085630.2.1 | Tomato | nucleus | 68.78 | 66.51 |
| VIT_04s0023g01330.t01 | Wine grape | nucleus | 59.51 | 57.82 |
| KRH76853 | Soybean | nucleus | 58.54 | 56.07 |
| Solyc03g034120.2.1 | Tomato | nucleus | 56.1 | 55.83 |
| KRH28621 | Soybean | nucleus | 58.54 | 55.81 |
| AT4G36740.2 | Thale cress | nucleus | 58.05 | 54.84 |
| CDX69241 | Canola | nucleus | 58.05 | 54.84 |
| CDX75593 | Canola | nucleus | 57.56 | 54.38 |
| CDX72601 | Canola | nucleus | 56.1 | 53.0 |
| Bra017780.1-P | Field mustard | nucleus | 55.61 | 52.53 |
| Bra040941.1-P | Field mustard | nucleus | 56.1 | 51.8 |
| Solyc03g034130.2.1 | Tomato | nucleus | 56.59 | 51.79 |
| Solyc03g034110.2.1 | Tomato | nucleus | 53.66 | 51.64 |
| CDY30312 | Canola | nucleus | 55.61 | 51.12 |
| CDY68376 | Canola | nucleus | 55.12 | 50.9 |
| CDY24769 | Canola | nucleus | 54.15 | 50.45 |
| AT2G18550.1 | Thale cress | nucleus | 52.68 | 49.09 |
| Bra028099.1-P | Field mustard | nucleus | 52.68 | 49.09 |
| CDY35477 | Canola | nucleus | 52.68 | 49.09 |
| CDY67008 | Canola | nucleus | 39.51 | 49.09 |
| KRH69950 | Soybean | nucleus | 50.24 | 48.58 |
| Solyc03g034150.1.1 | Tomato | nucleus | 47.32 | 48.02 |
| CDY30761 | Canola | nucleus | 49.76 | 45.54 |
| CDY57132 | Canola | nucleus | 49.76 | 45.33 |
| Bra010573.1-P | Field mustard | nucleus | 40.0 | 45.3 |
| GSMUA_Achr7P25990_001 | Banana | nucleus | 33.17 | 44.74 |
| GSMUA_Achr1P22640_001 | Banana | nucleus | 39.51 | 44.51 |
| CDY70377 | Canola | nucleus | 48.29 | 44.2 |
| Bra012093.1-P | Field mustard | nucleus | 48.29 | 44.2 |
| CDX81374 | Canola | nucleus | 47.8 | 43.75 |
| Bra037154.1-P | Field mustard | nucleus | 47.8 | 43.56 |
| AT5G66700.1 | Thale cress | nucleus | 47.8 | 42.98 |
| CDY52162 | Canola | nucleus | 47.8 | 42.42 |
| Bra031819.1-P | Field mustard | nucleus | 47.8 | 42.42 |
| GSMUA_Achr8P31170_001 | Banana | nucleus | 39.02 | 38.28 |
| HORVU2Hr1G092300.1 | Barley | nucleus | 24.88 | 37.78 |
| GSMUA_Achr4P07170_001 | Banana | nucleus | 36.59 | 37.31 |
| HORVU2Hr1G036680.2 | Barley | nucleus | 42.93 | 37.29 |
| Os07t0581700-01 | Rice | nucleus | 43.41 | 37.08 |
| EER97443 | Sorghum | nucleus | 40.0 | 35.5 |
| TraesCS2D01G199200.1 | Wheat | nucleus | 40.98 | 35.29 |
| Zm00001d021934_P001 | Maize | nucleus | 40.0 | 35.04 |
| TraesCS2A01G188500.1 | Wheat | nucleus | 40.49 | 34.87 |
| TraesCS2B01G218800.1 | Wheat | nucleus | 40.49 | 34.87 |
| TraesCS2B01G405700.1 | Wheat | nucleus | 37.56 | 34.84 |
| Zm00001d006687_P001 | Maize | nucleus | 37.07 | 34.23 |
| TraesCS4A01G040600.1 | Wheat | nucleus | 36.1 | 32.03 |
| Os03t0198600-01 | Rice | nucleus | 37.07 | 31.8 |
| HORVU4Hr1G070610.1 | Barley | nucleus | 35.12 | 31.44 |
| TraesCS4D01G261600.1 | Wheat | nucleus | 35.61 | 31.2 |
| TraesCS2D01G385500.1 | Wheat | nucleus | 37.56 | 31.17 |
| EER92693 | Sorghum | nucleus | 36.59 | 30.99 |
| TraesCS4B01G261600.1 | Wheat | nucleus | 35.12 | 30.9 |
| Zm00001d048172_P001 | Maize | nucleus | 35.12 | 30.77 |
| Zm00001d028129_P002 | Maize | nucleus, plastid | 35.61 | 30.54 |
| HORVU2Hr1G092290.6 | Barley | nucleus | 34.63 | 30.47 |
| TraesCSU01G009800.1 | Wheat | nucleus | 36.1 | 30.33 |
| GSMUA_Achr4P14070_001 | Banana | plastid | 40.98 | 28.67 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:K4B6I4 |
| PFAM:PF00046 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF281 |
| SMART:SM00389 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc02g062960.2 | EnsemblPlants:Solyc02g062960.2.1 | UniParc:UPI000276846A | SEG:seg |
Description
No Description!
Coordinates
chr2:-:34926676..34928726
Molecular Weight (calculated)
24132.6 Da
IEP (calculated)
6.524
GRAVY (calculated)
-1.053
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNDDQMLHI SQYYSGIYTQ QGEGKARRRR KKNKGDDVNG AMMMMMRKRK LSDEQVNLLE QSFEHEHKLE SERKDRLASE LGLDPRQVAV WFQNRRARWK
101: SKKLEEEYSK LKNEHETNIV DKCRLENEVL KLKEQMCEAE KEIQRLLTER SDGVSINSPT TSSLSMEAAM DPPFLGEFGF DNSFYGPGHD GMEWVNNLYN
201: MPYHM
101: SKKLEEEYSK LKNEHETNIV DKCRLENEVL KLKEQMCEAE KEIQRLLTER SDGVSINSPT TSSLSMEAAM DPPFLGEFGF DNSFYGPGHD GMEWVNNLYN
201: MPYHM
001: MNNQNVDDHN LLLISQLYPN VYTPLVPQQG GEAKPTRRRK RKSKSVVVAE EGENEGNGWF RKRKLSDEQV RMLEISFEDD HKLESERKDR LASELGLDPR
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM
Arabidopsis Description
ATHB-21Homeobox-leucine zipper protein ATHB-21 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU70]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.