Factsheet for GSMUA_Achr7P25990_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P07170_001	Banana	nucleus	60.53	45.77
GSMUA_Achr1P22640_001	Banana	nucleus	50.0	41.76
GSMUA_Achr8P31170_001	Banana	nucleus	56.58	41.15
CDY67008	Canola	nucleus	44.08	40.61
HORVU2Hr1G092300.1	Barley	nucleus	35.53	40.0
HORVU2Hr1G036680.2	Barley	nucleus	53.95	34.75
TraesCS2A01G188500.1	Wheat	nucleus	53.95	34.45
Os03t0198600-01	Rice	nucleus	53.95	34.31
Zm00001d048172_P001	Maize	nucleus	52.63	34.19
VIT_04s0023g01330.t01	Wine grape	nucleus	47.37	34.12
PGSC0003DMT400033036	Potato	nucleus	48.03	34.11
TraesCS2D01G199200.1	Wheat	nucleus	53.29	34.03
PGSC0003DMT400045834	Potato	nucleus	46.71	33.65
CDX75593	Canola	nucleus	48.03	33.64
Solyc02g085630.2.1	Tomato	nucleus	46.71	33.49
KRH28621	Soybean	nucleus	47.37	33.49
AT4G36740.2	Thale cress	nucleus	47.37	33.18
CDX69241	Canola	nucleus	47.37	33.18
Solyc02g062960.2.1	Tomato	nucleus	44.74	33.17
EER92693	Sorghum	nucleus	52.63	33.06
Os07t0581700-01	Rice	nucleus	51.97	32.92
Zm00001d021934_P001	Maize	nucleus	50.66	32.91
EER97443	Sorghum	nucleus	50.0	32.9
TraesCS2B01G218800.1	Wheat	nucleus	51.32	32.77
CDY24769	Canola	nucleus	47.37	32.73
Solyc03g034120.2.1	Tomato	nucleus	44.08	32.52
Zm00001d006687_P001	Maize	nucleus	47.37	32.43
CDY35477	Canola	nucleus	46.71	32.27
CDX72601	Canola	nucleus	46.05	32.26
Bra017780.1-P	Field mustard	nucleus	46.05	32.26
Zm00001d028129_P002	Maize	nucleus, plastid	50.66	32.22
PGSC0003DMT400011464	Potato	nucleus	44.08	32.06
Bra040941.1-P	Field mustard	nucleus	46.71	31.98
KRH76853	Soybean	nucleus	44.74	31.78
TraesCS4B01G261600.1	Wheat	nucleus	48.68	31.76
Solyc03g034110.2.1	Tomato	nucleus	44.08	31.46
PGSC0003DMT400045855	Potato	nucleus	44.08	31.46
HORVU4Hr1G070610.1	Barley	nucleus	47.37	31.44
CDY30312	Canola	nucleus	46.05	31.39
CDX81374	Canola	nucleus	46.05	31.25
TraesCS2B01G405700.1	Wheat	nucleus	45.39	31.22
TraesCS4D01G261600.1	Wheat	nucleus	48.03	31.2
KRH69950	Soybean	nucleus	43.42	31.13
CDY68376	Canola	nucleus	45.39	31.08
TraesCS4A01G040600.1	Wheat	nucleus	46.71	30.74
GSMUA_Achr4P14070_001	Banana	plastid	58.55	30.38
CDY70377	Canola	nucleus	44.74	30.36
Bra012093.1-P	Field mustard	nucleus	44.74	30.36
PGSC0003DMT400045832	Potato	nucleus	46.05	30.17
Bra028099.1-P	Field mustard	nucleus	43.42	30.0
CDY30761	Canola	nucleus	44.08	29.91
Solyc03g034130.2.1	Tomato	nucleus	44.08	29.91
Bra031819.1-P	Field mustard	nucleus	45.39	29.87
AT5G66700.1	Thale cress	nucleus	44.74	29.82
CDY57132	Canola	nucleus	44.08	29.78
Bra037154.1-P	Field mustard	nucleus	44.08	29.78
TraesCS2D01G385500.1	Wheat	nucleus	48.03	29.55
CDY52162	Canola	nucleus	44.74	29.44
AT2G18550.1	Thale cress	nucleus	41.45	28.64
TraesCSU01G009800.1	Wheat	nucleus	44.74	27.87
PGSC0003DMT400050373	Potato	nucleus	29.61	27.27
HORVU2Hr1G092290.6	Barley	nucleus	39.47	25.75
Solyc03g034150.1.1	Tomato	nucleus	34.21	25.74
Bra010573.1-P	Field mustard	nucleus	30.26	25.41

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
EnsemblPlantsGene:GSMUA_Achr7G25990_001	EnsemblPlants:GSMUA_Achr7P25990_001	EnsemblPlants:GSMUA_Achr7T25990_001	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0TKT5	PFAM:PF00046	PRINTS:PR00031	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF281	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI00029520D2
SEG:seg	:	:	:	:	:

Description

Homeobox-leucine zipper protein HOX14 [Source:GMGC_GENE;Acc:GSMUA_Achr7G25990_001]

Coordinates

chr7:-:27441929..27442463

Molecular Weight (calculated)

16985.1 Da

IEP (calculated)

7.164

GRAVY (calculated)

-0.563

Length

152 amino acids

Sequence
(BLAST)

001: MSFQDERKLE SGRKVHLATE LGLDPKQVAV WFQNRRARHK NKQVEEAYAK LKMAHDAVVF EKCHLEKEVF KLKGKLLEAE AEIRKLSLGA SGPGASGSNA
101: ERGGSSPSSS LSTVSHHPLV GEFGVEGEAD LMNIQEYNFN NYMMEWANFY GV

Best Arabidopsis Sequence Match ( AT2G18550.1 )
(BLAST)

001: MNNQNVDDHN LLLISQLYPN VYTPLVPQQG GEAKPTRRRK RKSKSVVVAE EGENEGNGWF RKRKLSDEQV RMLEISFEDD HKLESERKDR LASELGLDPR
101: QVAVWFQNRR ARWKNKRVED EYTKLKNAYE TTVVEKCRLD SEVIHLKEQL YEAEREIQRL AKRVEGTLSN SPISSSVTIE ANHTTPFFGD YDIGFDGEAD
201: ENLLYSPDYI DGLDWMSQFM

Arabidopsis Description

ATHB-21Homeobox-leucine zipper protein ATHB-21 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU70]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.