Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003133.1-P | Field mustard | nucleus | 68.23 | 70.59 |
| CDY67386 | Canola | cytosol | 68.23 | 70.59 |
| CDY13299 | Canola | cytosol | 67.56 | 68.71 |
| Zm00001d015671_P001 | Maize | cytosol | 41.81 | 55.56 |
| GSMUA_Achr5P14690_001 | Banana | cytosol | 54.18 | 52.77 |
| PGSC0003DMT400027153 | Potato | nucleus, plastid | 55.18 | 52.05 |
| GSMUA_Achr7P01960_001 | Banana | cytosol | 53.18 | 51.96 |
| GSMUA_Achr11P... | Banana | cytosol | 51.17 | 51.69 |
| Solyc10g084100.1.1 | Tomato | nucleus, plastid | 54.85 | 51.41 |
| KRH32464 | Soybean | plastid | 58.19 | 49.86 |
| Solyc10g086080.1.1 | Tomato | nucleus | 55.85 | 49.85 |
| KRH19856 | Soybean | nucleus | 57.86 | 49.57 |
| Solyc09g007700.2.1 | Tomato | plastid | 59.87 | 49.45 |
| PGSC0003DMT400004461 | Potato | plastid | 59.53 | 49.04 |
| PGSC0003DMT400045328 | Potato | plastid | 56.86 | 48.57 |
| VIT_08s0040g01940.t01 | Wine grape | cytosol | 58.19 | 48.07 |
| AT3G09770.1 | Thale cress | plastid | 60.2 | 46.39 |
| TraesCS7B01G390000.1 | Wheat | mitochondrion | 42.14 | 45.65 |
| KRH67682 | Soybean | nucleus | 51.84 | 45.45 |
| KRG95976 | Soybean | plastid | 55.18 | 45.08 |
| GSMUA_Achr2P12340_001 | Banana | nucleus | 59.2 | 44.36 |
| Zm00001d028475_P002 | Maize | cytosol | 58.53 | 43.75 |
| AT5G03200.1 | Thale cress | mitochondrion | 49.16 | 43.62 |
| KRH05126 | Soybean | cytosol | 14.05 | 43.3 |
| EER92535 | Sorghum | nucleus | 58.19 | 43.28 |
| TraesCS7D01G473200.1 | Wheat | cytosol | 43.48 | 42.9 |
| TraesCS7A01G486700.1 | Wheat | cytosol | 43.48 | 42.9 |
| TraesCS4B01G220700.1 | Wheat | cytosol | 57.86 | 42.72 |
| TraesCS4D01G221000.1 | Wheat | cytosol | 57.86 | 42.72 |
| TraesCS4A01G083500.1 | Wheat | cytosol | 57.53 | 42.47 |
| Os01t0374900-01 | Rice | plastid | 43.81 | 41.85 |
| Os10t0204100-01 | Rice | nucleus | 57.53 | 40.47 |
| HORVU0Hr1G008700.4 | Barley | cytosol | 56.19 | 39.62 |
| HORVU7Hr1G109550.2 | Barley | cytosol | 42.14 | 38.3 |
| AT3G06140.1 | Thale cress | mitochondrion | 42.81 | 35.65 |
| Os03t0254900-02 | Rice | cytosol, endoplasmic reticulum | 55.52 | 34.51 |
| AT5G19080.1 | Thale cress | cytosol | 43.14 | 34.13 |
| Solyc04g054680.1.1 | Tomato | cytosol | 36.79 | 30.73 |
| Solyc04g054650.1.1 | Tomato | cytosol | 40.13 | 24.69 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | EntrezGene:824509 | ProteinID:AEE79082.1 | EMBL:AK228124 | ArrayExpress:AT3G53410 |
| EnsemblPlantsGene:AT3G53410 | RefSeq:AT3G53410 | TAIR:AT3G53410 | RefSeq:AT3G53410-TAIR-G | EnsemblPlants:AT3G53410.1 | TAIR:AT3G53410.1 |
| EMBL:AY084516 | Unigene:At.35195 | EMBL:BT003133 | ProteinID:CAB67648.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR001841 | InterPro:IPR013083 |
| RefSeq:NP_190909.1 | PFAM:PF13920 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50089 | PANTHER:PTHR22996 | PANTHER:PTHR22996:SF0 |
| UniProt:Q9LFH6 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000000BF03 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
Description
LUL2Probable E3 ubiquitin-protein ligase LUL2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFH6]
Coordinates
chr3:-:19800951..19802328
Molecular Weight (calculated)
33600.4 Da
IEP (calculated)
4.898
GRAVY (calculated)
-0.615
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNVISGGSR PENHRDRTSP PYPNPNAQYQ GNYPSPYQDC ARYPYGEMAS PVQYVEHQEA VTIRNDINLK KETLRLEPDE QNPGKFLLSF TFDASVPGSI
101: TVMFFAKEGK DCNLIATKED LFPSTQVSFA KGLEQRFKQA CGTGIDFSDM SEADLVEANE TDVYHVAVKA EVVSEDDHPE SGTPNRQITH VVLEKDHKGE
201: YKARVVKQIL WVNGNRYVLQ EIYGIGNTVD DNGEDANERG KECVICLSEP RDTTVLPCRH MCMCSGCAKL LRFQTNLCPI CRQPVDRLLE ITVNNNDRN
101: TVMFFAKEGK DCNLIATKED LFPSTQVSFA KGLEQRFKQA CGTGIDFSDM SEADLVEANE TDVYHVAVKA EVVSEDDHPE SGTPNRQITH VVLEKDHKGE
201: YKARVVKQIL WVNGNRYVLQ EIYGIGNTVD DNGEDANERG KECVICLSEP RDTTVLPCRH MCMCSGCAKL LRFQTNLCPI CRQPVDRLLE ITVNNNDRN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.