Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024644.1-P | Field mustard | mitochondrion | 100.0 | 100.0 |
| CDY14678 | Canola | cytosol | 94.05 | 91.33 |
| AT1G27240.1 | Thale cress | cytosol | 28.57 | 51.61 |
| AT1G24210.1 | Thale cress | cytosol | 22.02 | 47.74 |
| CDY67989 | Canola | nucleus | 15.18 | 32.69 |
| CDY23529 | Canola | cytosol | 14.29 | 30.38 |
| CDY16234 | Canola | cytosol, mitochondrion, nucleus | 8.04 | 30.0 |
| CDY14679 | Canola | cytosol, mitochondrion, nucleus | 8.04 | 30.0 |
| CDY48381 | Canola | cytosol | 13.69 | 29.68 |
| CDY23528 | Canola | cytosol | 13.69 | 29.68 |
| CDY48380 | Canola | cytosol | 13.69 | 29.11 |
| CDY28457 | Canola | cytoskeleton, cytosol, nucleus | 7.14 | 28.57 |
| CDY42981 | Canola | mitochondrion | 13.39 | 28.12 |
| CDY42984 | Canola | cytosol, mitochondrion, nucleus | 13.39 | 28.12 |
| CDY66875 | Canola | mitochondrion | 13.39 | 28.12 |
| CDY03764 | Canola | cytosol | 13.39 | 27.78 |
| CDY42979 | Canola | cytosol, mitochondrion, nucleus | 11.9 | 27.59 |
| CDY40291 | Canola | cytoskeleton, cytosol, nucleus | 6.85 | 26.74 |
| CDY06480 | Canola | cytosol | 16.07 | 22.88 |
| CDY42983 | Canola | nucleus | 10.42 | 21.6 |
| CDY08302 | Canola | cytosol | 16.37 | 21.48 |
| CDY08301 | Canola | cytosol | 16.37 | 19.78 |
| VIT_17s0000g07540.t01 | Wine grape | nucleus | 9.82 | 17.74 |
| CDY03763 | Canola | cytosol | 13.1 | 15.44 |
| CDY42986 | Canola | cytosol | 9.23 | 14.83 |
| CDY31594 | Canola | nucleus | 16.07 | 13.6 |
| CDY55066 | Canola | cytosol | 16.07 | 13.57 |
| CDY64433 | Canola | cytosol | 10.12 | 12.83 |
| CDY45153 | Canola | nucleus | 16.96 | 5.89 |
| CDY37976 | Canola | nucleus | 16.96 | 5.77 |
| CDX93425 | Canola | nucleus | 16.96 | 5.61 |
| CDY30912 | Canola | nucleus | 16.67 | 5.33 |
| CDX78604 | Canola | nucleus | 20.24 | 5.04 |
| CDX70587 | Canola | nucleus | 20.24 | 5.02 |
| CDX91007 | Canola | nucleus | 19.64 | 4.99 |
| CDY24499 | Canola | nucleus | 16.07 | 4.87 |
| CDX85568 | Canola | nucleus | 19.05 | 4.79 |
| CDY33612 | Canola | nucleus | 16.37 | 4.77 |
| CDY28683 | Canola | mitochondrion, nucleus | 19.05 | 4.75 |
| CDY11625 | Canola | nucleus | 17.26 | 4.5 |
| CDX68358 | Canola | nucleus | 16.96 | 4.44 |
| CDY38781 | Canola | nucleus | 16.96 | 4.42 |
| CDY23527 | Canola | nucleus | 16.96 | 4.4 |
| CDY71516 | Canola | cytosol, mitochondrion, nucleus | 0.89 | 1.15 |
| CDY28682 | Canola | nucleus | 0.6 | 0.16 |
| CDY55065 | Canola | nucleus | 0.0 | 0.0 |
| CDY64434 | Canola | nucleus | 0.0 | 0.0 |
| CDY31595 | Canola | nucleus | 0.0 | 0.0 |
| CDY70453 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1160.11 | MapMan:35.1 | GO:A0A078FP50 | UniProt:A0A078FP50 | EnsemblPlants:CDY16235 | ProteinID:CDY16235 |
| ProteinID:CDY16235.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00090696001 |
| InterPro:IPR003822 | InterPro:PAH | InterPro:PAH_sf | PFAM:PF02671 | PFscan:PS51477 | SUPFAM:SSF47762 |
| UniParc:UPI0002542193 | SEG:seg | : | : | : | : |
Description
BnaA09g29690DBnaA09g29690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FP50]
Coordinates
chrLK032061:+:691068..693118
Molecular Weight (calculated)
39221.0 Da
IEP (calculated)
9.578
GRAVY (calculated)
-0.771
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGRVQPKN QMFSFAKQYI ARVKEALKDE PEKYQVFVDM LKYFTNHRRY DDEATILATV DDLLKDHPDL RLDFNNFLSP EAESIITPPE AKSIIPPTAE
101: SIIIPPEAER TIPPKAEETI TPEAERTIPD EAERTIITPD ANKQLSKYQT MVDRRVSREL TLDDDAHPYI ASVKKAFCDE PGKYKEFLQI LHAYSHLGKD
201: VPSTTARMRE LMKEHKKLFR GFRVFLPDHA KTTIILKVKS TIPPPEAEHH GTAQSNSKKR KRVEFDDTSF VDKLKIRFRS LDTHVVESFR KTMKKYEEGK
301: KSKRKVYNKV LNLLYYHEDL TEDFTRYFKR QKILKE
101: SIIIPPEAER TIPPKAEETI TPEAERTIPD EAERTIITPD ANKQLSKYQT MVDRRVSREL TLDDDAHPYI ASVKKAFCDE PGKYKEFLQI LHAYSHLGKD
201: VPSTTARMRE LMKEHKKLFR GFRVFLPDHA KTTIILKVKS TIPPPEAEHH GTAQSNSKKR KRVEFDDTSF VDKLKIRFRS LDTHVVESFR KTMKKYEEGK
301: KSKRKVYNKV LNLLYYHEDL TEDFTRYFKR QKILKE
001: MVERRVQVEP TLSDAHSYIT AVKEAFHDEP TKYEEFIKLM NDIRDHGVDK ASGIAKLTEL IKGHPRLLRG LSFFFPQVNR DIHHEAKRTI ILKDKATIPP
101: EAAYRGAKST YTKIKQIEPD WENFMNMLKT RFRSLDTHVV ESFLKIMIMY DEGKKSEKEV QEEVVDLLYY HEDLIDKFFR LFNMRK
101: EAAYRGAKST YTKIKQIEPD WENFMNMLKT RFRSLDTHVV ESFLKIMIMY DEGKKSEKEV QEEVVDLLYY HEDLIDKFFR LFNMRK
Arabidopsis Description
F17L21.3 [Source:UniProtKB/TrEMBL;Acc:O04571]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.