Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032101.1-P | Field mustard | cytosol | 99.66 | 99.66 |
| CDY20307 | Canola | cytosol | 99.32 | 99.32 |
| CDY55242 | Canola | cytosol | 77.4 | 91.5 |
| CDY50642 | Canola | cytosol | 87.67 | 88.89 |
| CDX68268 | Canola | cytosol, extracellular | 87.33 | 88.54 |
| CDY03641 | Canola | cytosol | 88.36 | 87.46 |
| CDX72910 | Canola | cytosol | 87.33 | 87.33 |
| CDX96403 | Canola | cytosol | 86.99 | 86.99 |
| CDX82152 | Canola | cytosol | 88.01 | 86.82 |
| HORVU6Hr1G031720.2 | Barley | cytosol | 21.23 | 78.48 |
| Solyc06g072120.2.1 | Tomato | nucleus | 73.63 | 72.64 |
| PGSC0003DMT400069333 | Potato | cytosol, mitochondrion | 73.29 | 71.57 |
| Solyc03g019780.2.1 | Tomato | nucleus | 72.95 | 71.48 |
| KRH06257 | Soybean | nucleus | 75.68 | 71.06 |
| TraesCS4A01G006000.1 | Wheat | cytosol | 72.6 | 70.67 |
| KRH47681 | Soybean | endoplasmic reticulum, nucleus | 75.0 | 70.65 |
| PGSC0003DMT400039497 | Potato | cytosol | 72.26 | 70.33 |
| KRH13835 | Soybean | cytosol | 73.97 | 69.45 |
| VIT_09s0002g00610.t01 | Wine grape | cytosol | 73.97 | 69.23 |
| TraesCS2B01G194400.1 | Wheat | cytosol, golgi, unclear | 71.92 | 69.08 |
| TraesCS2D01G175700.1 | Wheat | cytosol | 71.92 | 69.08 |
| TraesCS2A01G168300.1 | Wheat | cytosol, nucleus, plastid | 71.92 | 69.08 |
| Zm00001d006871_P001 | Maize | cytosol, extracellular, plastid | 71.92 | 68.4 |
| TraesCS4D01G298000.1 | Wheat | cytosol | 71.92 | 68.18 |
| TraesCS4B01G299100.1 | Wheat | cytosol, extracellular, golgi, nucleus, unclear | 71.92 | 68.18 |
| Zm00001d048256_P002 | Maize | plasma membrane | 71.23 | 67.53 |
| Zm00001d048253_P001 | Maize | plastid | 70.89 | 67.21 |
| Os03t0402400-00 | Rice | nucleus | 42.81 | 67.2 |
| Zm00001d048346_P001 | Maize | plastid | 71.23 | 67.1 |
| Zm00001d027919_P001 | Maize | plastid | 70.89 | 66.77 |
| GSMUA_Achr8P30490_001 | Banana | cytosol, unclear | 69.52 | 66.56 |
| GSMUA_Achr1P21820_001 | Banana | cytosol | 67.47 | 66.11 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane | 66.78 | 66.1 |
| KRH43602 | Soybean | endoplasmic reticulum | 74.66 | 57.52 |
| CDY42439 | Canola | cytosol | 51.37 | 57.47 |
| Zm00001d027527_P001 | Maize | mitochondrion | 70.21 | 54.23 |
| GSMUA_AchrUn_... | Banana | vacuole | 61.64 | 52.94 |
| GSMUA_Achr5P22560_001 | Banana | cytosol | 14.73 | 52.44 |
| OQU92440 | Sorghum | plastid | 26.71 | 42.62 |
Protein Annotations
| MapMan:17.1.3.1.1 | Gene3D:3.40.50.10490 | GO:A0A078I9Y9 | UniProt:A0A078I9Y9 | EnsemblPlants:CDY46144 | ProteinID:CDY46144 |
| ProteinID:CDY46144.1 | GO:GO:0000028 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015935 | GO:GO:0016043 |
| GO:GO:0019538 | GO:GO:0022627 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00083320001 | HAMAP:MF_03015 | PFAM:PF00318 |
| PRINTS:PR00395 | ScanProsite:PS00962 | ScanProsite:PS00963 | PANTHER:PTHR11489 | PANTHER:PTHR11489:SF15 | InterPro:Ribosomal_S2 |
| InterPro:Ribosomal_S2_CS | InterPro:Ribosomal_S2_euk | InterPro:Ribosomal_S2_euk/arc | InterPro:Ribosomal_S2_flav_dom_sf | SUPFAM:SSF52313 | TIGRFAMs:TIGR01012 |
| UniParc:UPI0004EEF7A9 | SEG:seg | : | : | : | : |
Description
BnaA04g14320D40S ribosomal protein SA [Source:UniProtKB/TrEMBL;Acc:A0A078I9Y9]
Coordinates
chrLK032651:+:116769..118407
Molecular Weight (calculated)
32102.0 Da
IEP (calculated)
4.873
GRAVY (calculated)
-0.338
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNVQLSQK ESDIKMMCAA EVHLGTKNCN YQMERYVFKR RNDGIYIFNL GKTWEKLQMA ARVIVAIENP QDIIVQSARP YGQRAVLKFA QYTGANAIAG
101: RHTPGTFTNQ MQTSFSEPRL LILTDPRTDH QPIKEGALGN IPIIAFCDTD SPMRFVDIGI PANNKGKHSI GCLFWLLARM VLQMRGTIRP AQKWDVMVDL
201: FFYREPEEAK QPEDEEAAPQ ADFGLPAPEY GAAGGEWTTA QIPDASWTGD AQQPISAAPA AASWNDDSAA PAADGWDTAV PPTSAVPAAG WE
101: RHTPGTFTNQ MQTSFSEPRL LILTDPRTDH QPIKEGALGN IPIIAFCDTD SPMRFVDIGI PANNKGKHSI GCLFWLLARM VLQMRGTIRP AQKWDVMVDL
201: FFYREPEEAK QPEDEEAAPQ ADFGLPAPEY GAAGGEWTTA QIPDASWTGD AQQPISAAPA AASWNDDSAA PAADGWDTAV PPTSAVPAAG WE
001: MAANGVATAG RQVSEKEADI QMMLSADVHL GTKNCNYQME RYVFKRRDDG IYIINLGKTW DKLQMAARVI VAIENPKDII VQSARPYGQR AVLKFAQYTG
101: VNAIAGRHTP GTFTNQMQTS FSEPRLLILT DPRTDHQPIK EGALGNIPTI AFCDTDSPMG FVDIGIPANN KGKHSIGCLF WLLARMVLQM RGTILAAQKW
201: DVMVDLFFYR EPEEAKQEGD EEAEVQADYG MVGGDQWTTA QISDAAWSGE VEQPISAAPA VGVTVAAGWE AASVPAAGWE
101: VNAIAGRHTP GTFTNQMQTS FSEPRLLILT DPRTDHQPIK EGALGNIPTI AFCDTDSPMG FVDIGIPANN KGKHSIGCLF WLLARMVLQM RGTILAAQKW
201: DVMVDLFFYR EPEEAKQEGD EEAEVQADYG MVGGDQWTTA QISDAAWSGE VEQPISAAPA VGVTVAAGWE AASVPAAGWE
Arabidopsis Description
RPSAb40S ribosomal protein SA [Source:UniProtKB/TrEMBL;Acc:F4J4W3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.