Factsheet for GSMUA_Achr10P27180_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P05330_001	Banana	nucleus	73.18	69.19
KRH56661	Soybean	nucleus	54.89	48.24
KRH03776	Soybean	nucleus	54.64	48.23
VIT_11s0016g04600.t01	Wine grape	nucleus	55.14	47.83
KRH54846	Soybean	nucleus	52.13	44.54
KRH63037	Soybean	nucleus	50.38	43.51
PGSC0003DMT400078136	Potato	nucleus	46.87	42.02
Solyc12g006800.1.1	Tomato	nucleus	46.12	41.91
CDY70722	Canola	nucleus	32.08	41.69
CDY02988	Canola	nucleus	44.11	41.61
Bra025115.1-P	Field mustard	nucleus	43.86	41.37
CDY51214	Canola	nucleus	43.86	41.37
TraesCS3D01G125300.1	Wheat	nucleus	48.62	41.1
TraesCS3A01G123700.1	Wheat	nucleus	48.37	40.89
TraesCS3B01G144100.1	Wheat	nucleus	48.12	40.68
Bra026548.1-P	Field mustard	nucleus	42.61	40.28
AT2G03500.1	Thale cress	nucleus	43.11	39.81
CDY71874	Canola	nucleus	35.09	38.78
Os01t0176700-01	Rice	nucleus	45.61	38.16
EES02372	Sorghum	nucleus	47.87	38.05
HORVU3Hr1G022960.5	Barley	nucleus	48.12	36.85
GSMUA_Achr1P23220_001	Banana	nucleus	23.81	35.85
Zm00001d039637_P001	Maize	nucleus	46.62	34.7
GSMUA_Achr10P...	Banana	nucleus	26.57	34.19
GSMUA_Achr7P00660_001	Banana	nucleus	28.32	33.33
GSMUA_Achr6P09870_001	Banana	nucleus	28.32	33.24
GSMUA_Achr3P21090_001	Banana	nucleus	30.33	32.44
GSMUA_Achr8P18270_001	Banana	nucleus	29.82	32.08
GSMUA_Achr4P28210_001	Banana	nucleus	25.81	31.99
GSMUA_Achr9P09630_001	Banana	mitochondrion, nucleus	26.57	31.74
GSMUA_Achr11P...	Banana	nucleus	29.07	31.44
GSMUA_Achr4P32500_001	Banana	nucleus	26.57	31.18
GSMUA_Achr10P...	Banana	nucleus	30.08	30.93
GSMUA_Achr6P34680_001	Banana	nucleus	29.32	30.87
GSMUA_Achr9P26570_001	Banana	nucleus	30.08	30.61
GSMUA_Achr4P13650_001	Banana	plastid	12.28	29.7
GSMUA_Achr4P03680_001	Banana	nucleus	22.81	29.55
GSMUA_Achr4P23210_001	Banana	nucleus	26.82	28.76
GSMUA_Achr10P...	Banana	nucleus	28.07	28.64
GSMUA_Achr2P13380_001	Banana	nucleus	26.07	28.42
GSMUA_Achr6P00650_001	Banana	nucleus	26.07	27.44

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr10G27180_001	EnsemblPlants:GSMUA_Achr10P27180_001	EnsemblPlants:GSMUA_Achr10T27180_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0RLU2
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31003	PANTHER:PTHR31003:SF3
InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00029545E8	SEG:seg	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G27180_001]

Coordinates

chr10:+:30402994..30404528

Molecular Weight (calculated)

43883.6 Da

IEP (calculated)

6.096

GRAVY (calculated)

-0.720

Length

399 amino acids

Sequence
(BLAST)

001: MGSPPELSLD YKLDNYTAVA KAAGAQPEQN QKIQEFLARL EEERHKIEVF KRELPLCMQL LNNAIEIYKQ QLQERVPLKY MNVDGSDKAN WMVSAQLWSP
101: PDDAAKQQAA PPPKEADVIP KLALDTTKQR SGGAFLPFSR EKSRGAHATS AEKVVEEEKK CAELENEIVN TGRHSAADGH GNTADGQAAA APPTHRKARR
201: CWSPDLHRRF VNALQMLGGS QVATPKQIRE LMKVDGLTND EVKSHLQKYR LHTRRPIPAP HAAAGAGAPP QLVVLGGIWV PPEYATSAGP AMYGAHAAPV
301: PREFYSPVPH HHYHHLHYPP LGLGASTPAA SRGRTADSPE PEVRSGGERS ESIEEEEEEV RKRDEEEEEE EAPASEEKAL VPLMVKAEDD NGGDVVLKI

Best Arabidopsis Sequence Match ( AT2G03500.1 )
(BLAST)

001: MASSSELSLD CKPQSYSMLL KSFGDNFQSD PTTHKLEDLL SRLEQERLKI DAFKRELPLC MQLLNNAVEV YKQQLEAYRA NSNNNNQSVG TRPVLEEFIP
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF

Arabidopsis Description

EFMMyb family transcription factor EFM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ85]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.