Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 60.16 | 58.76 |
| GSMUA_Achr6P34680_001 | Banana | nucleus | 49.6 | 49.6 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 43.27 | 49.1 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 41.42 | 48.76 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 43.54 | 48.67 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 49.87 | 48.21 |
| GSMUA_Achr10P... | Banana | nucleus | 48.28 | 46.8 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 45.65 | 46.51 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 44.06 | 45.63 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 39.05 | 43.53 |
| TraesCS5A01G401600.1 | Wheat | nucleus | 35.36 | 40.12 |
| TraesCS2A01G264800.1 | Wheat | nucleus | 37.47 | 40.0 |
| TraesCS5B01G406300.2 | Wheat | nucleus | 35.09 | 39.82 |
| TraesCS2D01G259200.2 | Wheat | nucleus | 37.2 | 39.61 |
| Zm00001d030891_P001 | Maize | nucleus | 37.73 | 39.07 |
| Zm00001d034160_P001 | Maize | nucleus | 34.56 | 38.76 |
| TraesCS5D01G081000.1 | Wheat | nucleus | 38.26 | 38.67 |
| KXG37487 | Sorghum | nucleus | 34.83 | 38.6 |
| Os07t0119300-01 | Rice | nucleus | 36.15 | 38.59 |
| Os03t0764600-01 | Rice | nucleus | 35.09 | 38.22 |
| TraesCS5B01G075300.1 | Wheat | nucleus | 37.99 | 38.2 |
| Os03t0241001-00 | Rice | plastid | 14.51 | 38.19 |
| TraesCS5A01G068900.2 | Wheat | nucleus | 37.99 | 38.1 |
| HORVU5Hr1G018220.2 | Barley | nucleus | 37.47 | 37.57 |
| Zm00001d007962_P001 | Maize | extracellular, nucleus | 33.77 | 37.1 |
| CDY51048 | Canola | nucleus | 29.29 | 36.88 |
| Bra018794.1-P | Field mustard | nucleus | 29.29 | 36.76 |
| Os12t0586300-00 | Rice | extracellular | 38.26 | 36.71 |
| KRG89233 | Soybean | nucleus | 35.62 | 36.68 |
| PGSC0003DMT400026096 | Potato | nucleus | 35.09 | 36.44 |
| CDY59732 | Canola | nucleus | 24.54 | 36.33 |
| KRH49770 | Soybean | nucleus | 35.09 | 36.24 |
| HORVU2Hr1G006350.1 | Barley | plastid | 12.66 | 35.82 |
| Zm00001d018698_P001 | Maize | nucleus | 34.83 | 35.77 |
| Zm00001d013202_P001 | Maize | nucleus | 34.04 | 35.64 |
| OQU79454 | Sorghum | nucleus | 38.26 | 35.63 |
| TraesCS2B01G277300.1 | Wheat | nucleus | 37.47 | 35.32 |
| Bra040662.1-P | Field mustard | nucleus | 30.34 | 35.28 |
| VIT_03s0063g01060.t01 | Wine grape | nucleus | 37.2 | 35.16 |
| AT1G49560.1 | Thale cress | nucleus | 30.61 | 34.83 |
| Solyc02g090400.2.1 | Tomato | nucleus | 34.04 | 34.77 |
| CDY40421 | Canola | nucleus | 14.78 | 34.36 |
| PGSC0003DMT400066352 | Potato | nucleus | 36.41 | 34.33 |
| HORVU6Hr1G034270.1 | Barley | plastid | 12.14 | 34.33 |
| KRH71185 | Soybean | nucleus | 37.47 | 34.3 |
| EER95793 | Sorghum | nucleus | 35.09 | 33.84 |
| CDY71327 | Canola | nucleus | 29.82 | 33.83 |
| Solyc01g108300.2.1 | Tomato | nucleus | 36.15 | 33.83 |
| KRH28514 | Soybean | nucleus | 30.34 | 33.63 |
| TraesCS5D01G411800.1 | Wheat | plastid | 34.83 | 33.5 |
| KRH04674 | Soybean | nucleus | 32.19 | 33.42 |
| Bra010581.1-P | Field mustard | nucleus | 27.44 | 33.33 |
| KRH50234 | Soybean | nucleus | 36.15 | 33.25 |
| CDY44057 | Canola | nucleus | 27.97 | 33.02 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 33.51 | 32.9 |
| HORVU2Hr1G062670.3 | Barley | plastid | 36.68 | 32.1 |
| Bra011720.1-P | Field mustard | nucleus | 27.44 | 32.0 |
| CDX75610 | Canola | nucleus | 27.18 | 31.69 |
| CDX69259 | Canola | nucleus | 26.91 | 31.68 |
| CDY42715 | Canola | nucleus | 24.54 | 31.63 |
| KRH76947 | Soybean | nucleus | 30.61 | 31.61 |
| Bra017795.1-P | Field mustard | nucleus | 24.27 | 31.29 |
| CDY72117 | Canola | nucleus | 15.04 | 31.15 |
| GSMUA_Achr6P09870_001 | Banana | nucleus | 27.18 | 30.29 |
| GSMUA_Achr1P23220_001 | Banana | nucleus | 20.58 | 29.43 |
| AT4G37180.2 | Thale cress | nucleus | 27.97 | 29.2 |
| GSMUA_Achr10P... | Banana | nucleus | 23.75 | 29.03 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 15.04 | 28.22 |
| GSMUA_Achr8P18270_001 | Banana | nucleus | 26.65 | 27.22 |
| GSMUA_Achr4P03680_001 | Banana | nucleus | 21.9 | 26.95 |
| GSMUA_Achr11P... | Banana | nucleus | 26.12 | 26.83 |
| GSMUA_Achr4P13650_001 | Banana | plastid | 11.61 | 26.67 |
| GSMUA_Achr10P... | Banana | nucleus | 27.44 | 26.07 |
| GSMUA_Achr6P05330_001 | Banana | nucleus | 28.76 | 25.83 |
| GSMUA_Achr3P21090_001 | Banana | nucleus | 25.33 | 25.74 |
| HORVU4Hr1G032990.1 | Barley | cytosol | 4.22 | 25.4 |
| CDY22459 | Canola | nucleus | 26.65 | 24.82 |
| HORVU5Hr1G097560.4 | Barley | nucleus, plastid | 29.55 | 24.56 |
| CDX69206 | Canola | nucleus | 9.76 | 23.72 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr6G00650_001 | EnsemblPlants:GSMUA_Achr6P00650_001 | EnsemblPlants:GSMUA_Achr6T00650_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0T313 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFscan:PS51294 | PANTHER:PTHR31003 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 |
| UniParc:UPI000295062E | SEG:seg | : | : | : | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G00650_001]
Coordinates
chr6:-:435798..437378
Molecular Weight (calculated)
41687.1 Da
IEP (calculated)
8.148
GRAVY (calculated)
-0.779
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAAADASL ELRLFAARSV TRSLKEAPAM EKGDGRKAKL EEYVTRLEEE KRKIEAFQRE LPHSMHLLTD VIDGLKKELG QCKMGESCAR VLGEFMPKKS
101: KFEEKGAVNP EADCKEKRNW MSSAQLWSDN SNRSNYEENE NEKEVLGERG EELSRPRKKE SLHLESKSLS GGSAFVPFKA PPALSASTKK QEKPSITLPD
201: LLLQASAIDN GNLTPAAVAE GRLVGDPVSE GIGRAPALAT ANDRTSSQTQ QQQPRKVRRC WSPDLHRRFL VALRLLGGAH VATPRQIRGL MEEDGLTNDE
301: VKSHLQKYRL RMTSSSNAKN RPAAIGGGGW VHEEQHSASL QQSVPQSGSP ESPLRLPVAS TTGDSCEEED RKSESHNCV
101: KFEEKGAVNP EADCKEKRNW MSSAQLWSDN SNRSNYEENE NEKEVLGERG EELSRPRKKE SLHLESKSLS GGSAFVPFKA PPALSASTKK QEKPSITLPD
201: LLLQASAIDN GNLTPAAVAE GRLVGDPVSE GIGRAPALAT ANDRTSSQTQ QQQPRKVRRC WSPDLHRRFL VALRLLGGAH VATPRQIRGL MEEDGLTNDE
301: VKSHLQKYRL RMTSSSNAKN RPAAIGGGGW VHEEQHSASL QQSVPQSGSP ESPLRLPVAS TTGDSCEEED RKSESHNCV
001: MASSSELSLD CKPQSYSMLL KSFGDNFQSD PTTHKLEDLL SRLEQERLKI DAFKRELPLC MQLLNNAVEV YKQQLEAYRA NSNNNNQSVG TRPVLEEFIP
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF
Arabidopsis Description
EFMMyb family transcription factor EFM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ85]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.