Factsheet for Bra010581.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44057	Canola	nucleus	98.72	95.95
Bra011720.1-P	Field mustard	nucleus	77.24	74.15
Bra017795.1-P	Field mustard	nucleus	66.35	70.41
VIT_07s0197g00060.t01	Wine grape	nucleus	45.51	36.79
KRH28514	Soybean	nucleus	38.14	34.8
Solyc02g090400.2.1	Tomato	nucleus	40.71	34.23
PGSC0003DMT400026096	Potato	nucleus	39.74	33.97
GSMUA_Achr7P00660_001	Banana	nucleus	36.86	33.92
KRH76947	Soybean	nucleus	38.14	32.43
TraesCS5A01G401600.1	Wheat	nucleus	34.62	32.34
GSMUA_Achr9P09630_001	Banana	mitochondrion, nucleus	34.62	32.34
TraesCS5B01G406300.2	Wheat	nucleus	34.29	32.04
GSMUA_Achr4P28210_001	Banana	nucleus	33.01	31.99
Zm00001d034160_P001	Maize	nucleus	34.29	31.66
KXG37487	Sorghum	nucleus	34.62	31.58
GSMUA_Achr6P34680_001	Banana	nucleus	37.82	31.13
KRH04674	Soybean	nucleus	36.22	30.96
GSMUA_Achr9P26570_001	Banana	nucleus	38.46	30.61
Bra018794.1-P	Field mustard	nucleus	29.49	30.46
Zm00001d007962_P001	Maize	extracellular, nucleus	33.65	30.43
GSMUA_Achr10P...	Banana	nucleus	37.82	30.18
GSMUA_Achr4P23210_001	Banana	nucleus	35.9	30.11
GSMUA_Achr10P...	Banana	nucleus	37.18	29.9
Os03t0764600-01	Rice	nucleus	33.01	29.6
Os07t0119300-01	Rice	nucleus	33.33	29.3
TraesCS2A01G264800.1	Wheat	nucleus	32.69	28.73
Zm00001d013202_P001	Maize	nucleus	33.33	28.73
TraesCS2D01G259200.2	Wheat	nucleus	32.05	28.09
TraesCS5D01G081000.1	Wheat	nucleus	33.65	28.0
Bra040662.1-P	Field mustard	nucleus	29.17	27.91
GSMUA_Achr2P13380_001	Banana	nucleus	32.69	27.87
GSMUA_Achr4P32500_001	Banana	nucleus	30.13	27.65
TraesCS5B01G075300.1	Wheat	nucleus	33.33	27.59
TraesCS5A01G068900.2	Wheat	nucleus	33.33	27.51
GSMUA_Achr6P00650_001	Banana	nucleus	33.33	27.44
TraesCS5D01G411800.1	Wheat	plastid	34.62	27.41
Zm00001d018698_P001	Maize	nucleus	32.37	27.37
Bra012471.1-P	Field mustard	nucleus	28.85	27.36
HORVU5Hr1G018220.2	Barley	nucleus	33.01	27.25
Bra004330.1-P	Field mustard	nucleus	31.09	27.02
EER95793	Sorghum	nucleus	33.65	26.72
Zm00001d030891_P001	Maize	nucleus	31.09	26.5
Os03t0241001-00	Rice	plastid	12.18	26.39
Bra038360.1-P	Field mustard	nucleus	30.77	26.09
Bra016734.1-P	Field mustard	nucleus	28.85	26.01
Bra017349.1-P	Field mustard	nucleus	29.17	25.42
TraesCS2B01G277300.1	Wheat	nucleus	32.69	25.37
Bra026548.1-P	Field mustard	nucleus	33.65	24.88
Os12t0586300-00	Rice	extracellular	31.41	24.81
Bra019824.1-P	Field mustard	nucleus	28.85	24.66
HORVU2Hr1G006350.1	Barley	plastid	10.58	24.63
Bra025161.1-P	Field mustard	nucleus	29.81	24.6
Bra025115.1-P	Field mustard	nucleus	33.01	24.35
HORVU6Hr1G034270.1	Barley	plastid	10.26	23.88
OQU79454	Sorghum	nucleus	31.09	23.83
HORVU2Hr1G062670.3	Barley	plastid	32.05	23.09
HORVU5Hr1G097560.4	Barley	nucleus, plastid	29.81	20.39
HORVU4Hr1G032990.1	Barley	cytosol	1.92	9.52

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EnsemblPlantsGene:Bra010581	EnsemblPlants:Bra010581.1	EnsemblPlants:Bra010581.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4D281	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31003	PANTHER:PTHR31003:SF2	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00025461DA	SEG:seg	:	:

Description

AT4G37180 (E=2e-098) | myb family transcription factor

Coordinates

chrA08:-:15313631..15314919

Molecular Weight (calculated)

35902.6 Da

IEP (calculated)

8.888

GRAVY (calculated)

-0.928

Length

312 amino acids

Sequence
(BLAST)

001: MSLNLNLSMY SIAKPLSQFL DEVSRIKDNH SKLSEIDVYV GKLEEERKKI DVFKRELPLC MLLLNEAIER LKEEASSVMM ASNGKLDVGQ GSKLENDYKK
101: NWMSSAQLWI SNSNSTNKEE DRCVTQTPFQ TCNNLNQGGA FLPFKPPPAP LPLMTPMMDC NRTEQNHQFN KPLQSHHHIP KKEQRRRWSQ DLRRRFVDAL
201: RRIGGSQVAT PKQIRDEMKV DGLTNDEVKS HLQKYRMHIR KHPLSSSDQP RETQSLISLS RSGSPQSPLV GRGLFNNNGS HISEDDEEEE KSDGRSWRGE
301: SDKKRQVVDF EL

Best Arabidopsis Sequence Match ( AT4G37180.1 )
(BLAST)

001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL

Arabidopsis Description

HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.