Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010581.1-P | Field mustard | nucleus | 95.95 | 98.72 |
| CDX75610 | Canola | nucleus | 76.95 | 76.0 |
| CDX69259 | Canola | nucleus | 76.01 | 75.78 |
| CDY42715 | Canola | nucleus | 65.11 | 71.09 |
| CDY22459 | Canola | nucleus | 88.16 | 69.53 |
| CDY72117 | Canola | nucleus | 36.14 | 63.39 |
| CDY40421 | Canola | nucleus | 31.15 | 61.35 |
| CDX69206 | Canola | nucleus | 27.41 | 56.41 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 44.86 | 37.31 |
| Solyc02g090400.2.1 | Tomato | nucleus | 40.81 | 35.31 |
| KRH28514 | Soybean | nucleus | 37.38 | 35.09 |
| PGSC0003DMT400026096 | Potato | nucleus | 39.88 | 35.07 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 36.45 | 34.51 |
| KRH76947 | Soybean | nucleus | 37.69 | 32.97 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 33.02 | 32.92 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 33.96 | 32.63 |
| TraesCS5A01G401600.1 | Wheat | nucleus | 33.96 | 32.63 |
| Zm00001d034160_P001 | Maize | nucleus | 34.27 | 32.54 |
| KXG37487 | Sorghum | nucleus | 34.58 | 32.46 |
| TraesCS5B01G406300.2 | Wheat | nucleus | 33.64 | 32.34 |
| GSMUA_Achr6P34680_001 | Banana | nucleus | 37.69 | 31.93 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 38.32 | 31.38 |
| KRH04674 | Soybean | nucleus | 35.51 | 31.23 |
| CDY51048 | Canola | nucleus | 29.28 | 31.23 |
| CDY20522 | Canola | nucleus | 32.09 | 31.21 |
| Zm00001d007962_P001 | Maize | extracellular, nucleus | 33.33 | 31.01 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 35.83 | 30.91 |
| GSMUA_Achr10P... | Banana | nucleus | 37.07 | 30.67 |
| GSMUA_Achr10P... | Banana | nucleus | 37.07 | 30.43 |
| CDY51129 | Canola | nucleus | 30.22 | 30.31 |
| Os07t0119300-01 | Rice | nucleus | 33.33 | 30.14 |
| Os03t0764600-01 | Rice | nucleus | 32.4 | 29.89 |
| Zm00001d013202_P001 | Maize | nucleus | 33.33 | 29.56 |
| CDY59732 | Canola | nucleus | 23.36 | 29.3 |
| TraesCS2A01G264800.1 | Wheat | nucleus | 32.09 | 29.01 |
| TraesCS5D01G081000.1 | Wheat | nucleus | 33.64 | 28.8 |
| CDY71327 | Canola | nucleus | 29.91 | 28.74 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 32.71 | 28.69 |
| TraesCS5B01G075300.1 | Wheat | nucleus | 33.33 | 28.38 |
| TraesCS2D01G259200.2 | Wheat | nucleus | 31.46 | 28.37 |
| TraesCS5A01G068900.2 | Wheat | nucleus | 33.33 | 28.31 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 29.91 | 28.24 |
| Zm00001d018698_P001 | Maize | nucleus | 32.4 | 28.18 |
| HORVU5Hr1G018220.2 | Barley | nucleus | 33.02 | 28.04 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 33.02 | 27.97 |
| CDX95998 | Canola | nucleus | 31.15 | 27.86 |
| Os03t0241001-00 | Rice | plastid | 12.46 | 27.78 |
| TraesCS5D01G411800.1 | Wheat | plastid | 33.96 | 27.66 |
| EER95793 | Sorghum | nucleus | 33.64 | 27.48 |
| CDX81535 | Canola | nucleus | 29.28 | 27.41 |
| CDX97993 | Canola | nucleus | 29.28 | 27.25 |
| CDY16075 | Canola | nucleus | 29.59 | 27.22 |
| CDY38609 | Canola | nucleus | 30.53 | 27.15 |
| CDY19382 | Canola | nucleus | 28.66 | 27.06 |
| Zm00001d030891_P001 | Maize | nucleus | 30.84 | 27.05 |
| CDY04180 | Canola | nucleus | 28.35 | 27.0 |
| CDY54503 | Canola | nucleus | 30.84 | 26.9 |
| CDY50179 | Canola | nucleus | 28.97 | 26.88 |
| CDX83554 | Canola | nucleus | 29.59 | 26.84 |
| CDY21091 | Canola | nucleus | 28.66 | 26.59 |
| CDY39188 | Canola | nucleus | 28.35 | 26.15 |
| HORVU2Hr1G006350.1 | Barley | plastid | 10.9 | 26.12 |
| CDY13584 | Canola | nucleus | 28.97 | 26.05 |
| TraesCS2B01G277300.1 | Wheat | nucleus | 32.09 | 25.62 |
| Os12t0586300-00 | Rice | extracellular | 31.46 | 25.57 |
| HORVU6Hr1G034270.1 | Barley | plastid | 10.59 | 25.37 |
| CDY70722 | Canola | nucleus | 23.68 | 24.76 |
| CDY51214 | Canola | nucleus | 32.4 | 24.59 |
| CDY02988 | Canola | nucleus | 32.4 | 24.59 |
| OQU79454 | Sorghum | nucleus | 30.84 | 24.32 |
| HORVU2Hr1G062670.3 | Barley | plastid | 31.46 | 23.33 |
| CDY71874 | Canola | nucleus | 25.55 | 22.71 |
| HORVU5Hr1G097560.4 | Barley | nucleus, plastid | 28.97 | 20.39 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 11.53 | 18.32 |
| HORVU4Hr1G032990.1 | Barley | cytosol | 2.18 | 11.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:A0A078I1W8 | UniProt:A0A078I1W8 | EnsemblPlants:CDY44057 | ProteinID:CDY44057 |
| ProteinID:CDY44057.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00079473001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31003 |
| PANTHER:PTHR31003:SF2 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EDC4FD | SEG:seg |
Description
BnaA08g15490DBnaA08g15490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1W8]
Coordinates
chrLK032577:+:229225..230801
Molecular Weight (calculated)
36982.8 Da
IEP (calculated)
9.174
GRAVY (calculated)
-0.961
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQTDKDRRM SLNLNLSMYS IAKPLSQFLD EVSRIKDNHS KLSEIDVYVG KLEEERKKID VFKRELPLCM LLLNEAIERL KEEASSVMMA SNGKLDVGQG
101: SKLENDNKKN WMSSAQLWIS NSNSTNKEED RCVTQTPFQT CNNLNRGGAF LPFKPPPAPL SLMTPMMDCN RTEQNHQFNK PLQSHHHIPK KEQRRRWSQD
201: LHRRFVDALR RIGGSQVATP KQIRDEMKVD GLTNDEVKSH LQKYRMHIRK HPLSSSDQPR ETQSLISLSR SGSPQSPLVG RGLFNNNGSH ISEDDEEEEK
301: SDGRSWRGES DKKRQVVDFE L
101: SKLENDNKKN WMSSAQLWIS NSNSTNKEED RCVTQTPFQT CNNLNRGGAF LPFKPPPAPL SLMTPMMDCN RTEQNHQFNK PLQSHHHIPK KEQRRRWSQD
201: LHRRFVDALR RIGGSQVATP KQIRDEMKVD GLTNDEVKSH LQKYRMHIRK HPLSSSDQPR ETQSLISLSR SGSPQSPLVG RGLFNNNGSH ISEDDEEEEK
301: SDGRSWRGES DKKRQVVDFE L
001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
Arabidopsis Description
HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.