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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 3
  • nucleus 2
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G259200.2 Wheat nucleus 86.32 97.47
TraesCS2A01G264800.1 Wheat nucleus 85.57 96.9
HORVU2Hr1G062670.3 Barley plastid 93.53 86.84
Zm00001d007962_P001 Maize extracellular, nucleus 61.94 72.17
Os07t0119300-01 Rice nucleus 63.43 71.83
EER95793 Sorghum nucleus 66.67 68.19
Zm00001d018698_P001 Maize nucleus 62.19 67.75
TraesCS5B01G406300.2 Wheat nucleus 46.77 56.29
GSMUA_Achr10P... Banana nucleus 39.8 40.92
GSMUA_Achr6P34680_001 Banana nucleus 38.31 40.63
GSMUA_Achr10P... Banana nucleus 39.05 40.46
GSMUA_Achr7P00660_001 Banana nucleus 34.08 40.41
GSMUA_Achr4P32500_001 Banana nucleus 33.08 39.12
GSMUA_Achr9P26570_001 Banana nucleus 38.06 39.03
GSMUA_Achr4P23210_001 Banana nucleus 35.82 38.71
GSMUA_Achr4P28210_001 Banana nucleus 30.85 38.51
GSMUA_Achr9P09630_001 Banana mitochondrion, nucleus 31.84 38.32
GSMUA_Achr2P13380_001 Banana nucleus 34.33 37.7
GSMUA_Achr6P00650_001 Banana nucleus 35.32 37.47
TraesCS5B01G075300.1 Wheat nucleus 34.58 36.87
VIT_03s0063g01060.t01 Wine grape nucleus 35.57 35.66
KRH28514 Soybean nucleus 29.85 35.09
KRH71185 Soybean nucleus 35.82 34.78
Bra018794.1-P Field mustard nucleus 26.12 34.77
CDY59732 Canola nucleus 22.14 34.77
CDY51048 Canola nucleus 25.87 34.55
KRG89233 Soybean nucleus 31.59 34.51
KRH50234 Soybean nucleus 35.32 34.47
CDY40421 Canola nucleus 13.93 34.36
VIT_07s0197g00060.t01 Wine grape nucleus 32.59 33.94
KRH49770 Soybean nucleus 30.85 33.79
PGSC0003DMT400066352 Potato nucleus 33.58 33.58
Solyc01g108300.2.1 Tomato nucleus 33.83 33.58
Solyc02g090400.2.1 Tomato nucleus 30.85 33.42
CDY72117 Canola nucleus 15.17 33.33
CDX75610 Canola nucleus 26.87 33.23
PGSC0003DMT400026096 Potato nucleus 30.1 33.15
Bra040662.1-P Field mustard nucleus 26.62 32.82
Bra010581.1-P Field mustard nucleus 25.37 32.69
CDX69259 Canola nucleus 26.12 32.61
Bra017795.1-P Field mustard nucleus 23.63 32.31
CDY42715 Canola nucleus 23.63 32.31
KRH76947 Soybean nucleus 29.35 32.15
CDY44057 Canola nucleus 25.62 32.09
Bra011720.1-P Field mustard nucleus 25.87 32.0
KRH04674 Soybean nucleus 28.86 31.78
CDY71327 Canola nucleus 26.37 31.74
AT1G49560.1 Thale cress nucleus 26.12 31.53
CDX69206 Canola nucleus 11.19 28.85
AT4G37180.2 Thale cress nucleus 25.87 28.65
TraesCS2B01G135600.1 Wheat nucleus 21.39 24.57
TraesCS3B01G144100.1 Wheat nucleus 28.61 24.36
CDY22459 Canola nucleus 24.13 23.83
CDY29342 Canola cytosol, mitochondrion, nucleus 10.45 20.79
Protein Annotations
EnsemblPlants:TraesCS2B01G277300.1EnsemblPlantsGene:TraesCS2B01G277300Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:Myb_dom_plantsInterPro:SANT/Myb
ncoils:CoilPANTHER:PTHR31003PANTHER:PTHR31003:SF15PFAM:PF00249PFscan:PS51294SEG:seg
SUPFAM:SSF46689TIGRFAMs:TIGR01557MapMan:15.5.2.3:::
Description
No Description!
Coordinates
chr2B:-:383056722..383058413
Molecular Weight (calculated)
43328.4 Da
IEP (calculated)
8.728
GRAVY (calculated)
-0.559
Length
402 amino acids
Sequence
(BLAST)
001: MLLLLYINVP IHPPPPSSSH PPHTFSCNKS VKIPFGEREL RCKTMGLDVG EIGMGADLSL DLKMFAAKSL GRVREAPAAA MDDCIRRLEE EKSKIEVFRR
101: ELPLCARLLA DVIDVMKKEV EEKKRGGDRG EDKEDAGAGD KSNWMSTAQL WTGDSVPGDD ASEKQGERRR SSVPESRDGA ALPFKAVGSG APAFAPPSLR
201: KDDKAVGMPD LPFLSPAPIK TSLAAATGGA EESRRQLVGF AQEAARAAAA LAPAAPSLSL QAQSQQTAQQ QQQQQQARKA RRCWSPELHR QFVTALHQLG
301: GPQVATPKQI RELMKVDGLT NDEVKSHLQK YRLHNRRAPG SPAANRPIVL MGGLWITQEQ SSSQSGGSPP GPLNFSSSGV AASSVTVSGE EEDGRSESYG
401: WK
Best Arabidopsis Sequence Match ( AT2G03500.1 )
(BLAST)
001: MASSSELSLD CKPQSYSMLL KSFGDNFQSD PTTHKLEDLL SRLEQERLKI DAFKRELPLC MQLLNNAVEV YKQQLEAYRA NSNNNNQSVG TRPVLEEFIP
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF
Arabidopsis Description
EFMMyb family transcription factor EFM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ85]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.