Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
- vacuole 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G259200.2 | Wheat | nucleus | 86.32 | 97.47 |
TraesCS2A01G264800.1 | Wheat | nucleus | 85.57 | 96.9 |
HORVU2Hr1G062670.3 | Barley | plastid | 93.53 | 86.84 |
Zm00001d007962_P001 | Maize | extracellular, nucleus | 61.94 | 72.17 |
Os07t0119300-01 | Rice | nucleus | 63.43 | 71.83 |
EER95793 | Sorghum | nucleus | 66.67 | 68.19 |
Zm00001d018698_P001 | Maize | nucleus | 62.19 | 67.75 |
TraesCS5B01G406300.2 | Wheat | nucleus | 46.77 | 56.29 |
GSMUA_Achr10P... | Banana | nucleus | 39.8 | 40.92 |
GSMUA_Achr6P34680_001 | Banana | nucleus | 38.31 | 40.63 |
GSMUA_Achr10P... | Banana | nucleus | 39.05 | 40.46 |
GSMUA_Achr7P00660_001 | Banana | nucleus | 34.08 | 40.41 |
GSMUA_Achr4P32500_001 | Banana | nucleus | 33.08 | 39.12 |
GSMUA_Achr9P26570_001 | Banana | nucleus | 38.06 | 39.03 |
GSMUA_Achr4P23210_001 | Banana | nucleus | 35.82 | 38.71 |
GSMUA_Achr4P28210_001 | Banana | nucleus | 30.85 | 38.51 |
GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 31.84 | 38.32 |
GSMUA_Achr2P13380_001 | Banana | nucleus | 34.33 | 37.7 |
GSMUA_Achr6P00650_001 | Banana | nucleus | 35.32 | 37.47 |
TraesCS5B01G075300.1 | Wheat | nucleus | 34.58 | 36.87 |
VIT_03s0063g01060.t01 | Wine grape | nucleus | 35.57 | 35.66 |
KRH28514 | Soybean | nucleus | 29.85 | 35.09 |
KRH71185 | Soybean | nucleus | 35.82 | 34.78 |
Bra018794.1-P | Field mustard | nucleus | 26.12 | 34.77 |
CDY59732 | Canola | nucleus | 22.14 | 34.77 |
CDY51048 | Canola | nucleus | 25.87 | 34.55 |
KRG89233 | Soybean | nucleus | 31.59 | 34.51 |
KRH50234 | Soybean | nucleus | 35.32 | 34.47 |
CDY40421 | Canola | nucleus | 13.93 | 34.36 |
VIT_07s0197g00060.t01 | Wine grape | nucleus | 32.59 | 33.94 |
KRH49770 | Soybean | nucleus | 30.85 | 33.79 |
PGSC0003DMT400066352 | Potato | nucleus | 33.58 | 33.58 |
Solyc01g108300.2.1 | Tomato | nucleus | 33.83 | 33.58 |
Solyc02g090400.2.1 | Tomato | nucleus | 30.85 | 33.42 |
CDY72117 | Canola | nucleus | 15.17 | 33.33 |
CDX75610 | Canola | nucleus | 26.87 | 33.23 |
PGSC0003DMT400026096 | Potato | nucleus | 30.1 | 33.15 |
Bra040662.1-P | Field mustard | nucleus | 26.62 | 32.82 |
Bra010581.1-P | Field mustard | nucleus | 25.37 | 32.69 |
CDX69259 | Canola | nucleus | 26.12 | 32.61 |
Bra017795.1-P | Field mustard | nucleus | 23.63 | 32.31 |
CDY42715 | Canola | nucleus | 23.63 | 32.31 |
KRH76947 | Soybean | nucleus | 29.35 | 32.15 |
CDY44057 | Canola | nucleus | 25.62 | 32.09 |
Bra011720.1-P | Field mustard | nucleus | 25.87 | 32.0 |
KRH04674 | Soybean | nucleus | 28.86 | 31.78 |
CDY71327 | Canola | nucleus | 26.37 | 31.74 |
AT1G49560.1 | Thale cress | nucleus | 26.12 | 31.53 |
CDX69206 | Canola | nucleus | 11.19 | 28.85 |
AT4G37180.2 | Thale cress | nucleus | 25.87 | 28.65 |
TraesCS2B01G135600.1 | Wheat | nucleus | 21.39 | 24.57 |
TraesCS3B01G144100.1 | Wheat | nucleus | 28.61 | 24.36 |
CDY22459 | Canola | nucleus | 24.13 | 23.83 |
CDY29342 | Canola | cytosol, mitochondrion, nucleus | 10.45 | 20.79 |
Protein Annotations
EnsemblPlants:TraesCS2B01G277300.1 | EnsemblPlantsGene:TraesCS2B01G277300 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | InterPro:SANT/Myb |
ncoils:Coil | PANTHER:PTHR31003 | PANTHER:PTHR31003:SF15 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg |
SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | MapMan:15.5.2.3 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:383056722..383058413
Molecular Weight (calculated)
43328.4 Da
IEP (calculated)
8.728
GRAVY (calculated)
-0.559
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLLLYINVP IHPPPPSSSH PPHTFSCNKS VKIPFGEREL RCKTMGLDVG EIGMGADLSL DLKMFAAKSL GRVREAPAAA MDDCIRRLEE EKSKIEVFRR
101: ELPLCARLLA DVIDVMKKEV EEKKRGGDRG EDKEDAGAGD KSNWMSTAQL WTGDSVPGDD ASEKQGERRR SSVPESRDGA ALPFKAVGSG APAFAPPSLR
201: KDDKAVGMPD LPFLSPAPIK TSLAAATGGA EESRRQLVGF AQEAARAAAA LAPAAPSLSL QAQSQQTAQQ QQQQQQARKA RRCWSPELHR QFVTALHQLG
301: GPQVATPKQI RELMKVDGLT NDEVKSHLQK YRLHNRRAPG SPAANRPIVL MGGLWITQEQ SSSQSGGSPP GPLNFSSSGV AASSVTVSGE EEDGRSESYG
401: WK
101: ELPLCARLLA DVIDVMKKEV EEKKRGGDRG EDKEDAGAGD KSNWMSTAQL WTGDSVPGDD ASEKQGERRR SSVPESRDGA ALPFKAVGSG APAFAPPSLR
201: KDDKAVGMPD LPFLSPAPIK TSLAAATGGA EESRRQLVGF AQEAARAAAA LAPAAPSLSL QAQSQQTAQQ QQQQQQARKA RRCWSPELHR QFVTALHQLG
301: GPQVATPKQI RELMKVDGLT NDEVKSHLQK YRLHNRRAPG SPAANRPIVL MGGLWITQEQ SSSQSGGSPP GPLNFSSSGV AASSVTVSGE EEDGRSESYG
401: WK
001: MASSSELSLD CKPQSYSMLL KSFGDNFQSD PTTHKLEDLL SRLEQERLKI DAFKRELPLC MQLLNNAVEV YKQQLEAYRA NSNNNNQSVG TRPVLEEFIP
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF
Arabidopsis Description
EFMMyb family transcription factor EFM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ85]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.