Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40421 | Canola | nucleus | 79.23 | 88.96 |
| CDY42715 | Canola | nucleus | 67.21 | 41.84 |
| CDX69206 | Canola | nucleus | 31.69 | 37.18 |
| CDX75610 | Canola | nucleus | 65.57 | 36.92 |
| CDY44057 | Canola | nucleus | 63.39 | 36.14 |
| CDX69259 | Canola | nucleus | 62.84 | 35.71 |
| CDY22459 | Canola | nucleus | 60.66 | 27.27 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 37.7 | 20.35 |
| PGSC0003DMT400026096 | Potato | nucleus | 39.34 | 19.73 |
| Solyc02g090400.2.1 | Tomato | nucleus | 39.89 | 19.68 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 34.43 | 19.57 |
| KRH28514 | Soybean | nucleus | 34.97 | 18.71 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 39.34 | 18.37 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 37.16 | 18.28 |
| Os07t0119300-01 | Rice | nucleus | 34.97 | 18.03 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 32.79 | 17.96 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 37.7 | 17.88 |
| Zm00001d034160_P001 | Maize | nucleus | 32.79 | 17.75 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 32.79 | 17.65 |
| KRH76947 | Soybean | nucleus | 34.97 | 17.44 |
| GSMUA_Achr6P34680_001 | Banana | nucleus | 36.07 | 17.41 |
| Zm00001d007962_P001 | Maize | extracellular, nucleus | 32.79 | 17.39 |
| TraesCS5A01G401600.1 | Wheat | nucleus | 31.69 | 17.37 |
| TraesCS5D01G081000.1 | Wheat | nucleus | 35.52 | 17.33 |
| CDY20522 | Canola | nucleus | 31.15 | 17.27 |
| KXG37487 | Sorghum | nucleus | 32.24 | 17.25 |
| HORVU5Hr1G018220.2 | Barley | nucleus | 35.52 | 17.2 |
| CDY51129 | Canola | nucleus | 30.05 | 17.19 |
| TraesCS2A01G264800.1 | Wheat | nucleus | 33.33 | 17.18 |
| GSMUA_Achr10P... | Banana | nucleus | 36.07 | 17.01 |
| TraesCS5B01G075300.1 | Wheat | nucleus | 34.97 | 16.98 |
| CDY51048 | Canola | nucleus | 27.87 | 16.94 |
| TraesCS5A01G068900.2 | Wheat | nucleus | 34.97 | 16.93 |
| TraesCS2D01G259200.2 | Wheat | nucleus | 32.79 | 16.85 |
| TraesCS5B01G406300.2 | Wheat | nucleus | 30.6 | 16.77 |
| Os03t0764600-01 | Rice | nucleus | 31.69 | 16.67 |
| Os03t0241001-00 | Rice | plastid | 13.11 | 16.67 |
| Zm00001d030891_P001 | Maize | nucleus | 33.33 | 16.67 |
| CDY70722 | Canola | nucleus | 27.87 | 16.61 |
| Zm00001d018698_P001 | Maize | nucleus | 33.33 | 16.53 |
| GSMUA_Achr10P... | Banana | nucleus | 34.97 | 16.37 |
| CDY54503 | Canola | nucleus | 32.79 | 16.3 |
| CDX95998 | Canola | nucleus | 31.69 | 16.16 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 32.24 | 16.12 |
| CDX81535 | Canola | nucleus | 30.05 | 16.04 |
| Zm00001d013202_P001 | Maize | nucleus | 31.69 | 16.02 |
| CDY59732 | Canola | nucleus | 22.4 | 16.02 |
| CDY19382 | Canola | nucleus | 29.51 | 15.88 |
| CDY71327 | Canola | nucleus | 28.96 | 15.87 |
| CDY38609 | Canola | nucleus | 31.15 | 15.79 |
| CDY71874 | Canola | nucleus | 31.15 | 15.79 |
| EER95793 | Sorghum | nucleus | 33.88 | 15.78 |
| OQU79454 | Sorghum | nucleus | 34.97 | 15.72 |
| CDX97993 | Canola | nucleus | 29.51 | 15.65 |
| KRH04674 | Soybean | nucleus | 31.15 | 15.62 |
| Os12t0586300-00 | Rice | extracellular | 33.33 | 15.44 |
| CDY04180 | Canola | nucleus | 28.42 | 15.43 |
| CDY50179 | Canola | nucleus | 28.96 | 15.32 |
| CDX83554 | Canola | nucleus | 29.51 | 15.25 |
| CDY16075 | Canola | nucleus | 28.96 | 15.19 |
| TraesCS2B01G277300.1 | Wheat | nucleus | 33.33 | 15.17 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 31.15 | 15.04 |
| CDY21091 | Canola | nucleus | 28.42 | 15.03 |
| CDY39188 | Canola | nucleus | 28.42 | 14.94 |
| CDY13584 | Canola | nucleus | 28.96 | 14.85 |
| TraesCS5D01G411800.1 | Wheat | plastid | 31.15 | 14.47 |
| CDY02988 | Canola | nucleus | 32.24 | 13.95 |
| CDY51214 | Canola | nucleus | 32.24 | 13.95 |
| HORVU2Hr1G062670.3 | Barley | plastid | 32.79 | 13.86 |
| HORVU2Hr1G006350.1 | Barley | plastid | 9.29 | 12.69 |
| HORVU6Hr1G034270.1 | Barley | plastid | 9.29 | 12.69 |
| HORVU5Hr1G097560.4 | Barley | nucleus, plastid | 30.6 | 12.28 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 11.48 | 10.4 |
| HORVU4Hr1G032990.1 | Barley | cytosol | 3.28 | 9.52 |
Protein Annotations
| EnsemblPlants:CDY72117 | EnsemblPlantsGene:GSBRNA2T00024944001 | Gene3D:1.10.10.60 | GO:A0A078K2I7 | InterPro:Myb_dom_plants | PANTHER:PTHR31003 |
| PANTHER:PTHR31003:SF2 | ProteinID:CDY72117 | ProteinID:CDY72117.1 | SEG:seg | TIGRFAMs:TIGR01557 | UniParc:UPI0004EED782 |
| UniProt:A0A078K2I7 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng76060DBnaCnng76060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K2I7]
Coordinates
chrLK049031:-:166..2141
Molecular Weight (calculated)
20844.5 Da
IEP (calculated)
8.096
GRAVY (calculated)
-0.810
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MIWFLCVAIE RLKQETSSVQ GVELETDNKK NWMSSAQLWI SNSNSQSQST NEEENRCVTQ TCNNNKANQR GAILSFNRPP PPLPSPPLSL PTSEILTDYS
101: SRIEQRSQVA TPKQIRDIVK VDGLTNDEVK SHLQIKKYRM HIRMHPLHPL HPTNNFSASD QPRETQNLIS LSRSDSPQGP LDW
101: SRIEQRSQVA TPKQIRDIVK VDGLTNDEVK SHLQIKKYRM HIRMHPLHPL HPTNNFSASD QPRETQNLIS LSRSDSPQGP LDW
001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
Arabidopsis Description
HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.