Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030891_P001 | Maize | nucleus | 75.68 | 84.15 |
| TraesCS5B01G075300.1 | Wheat | nucleus | 63.39 | 68.44 |
| TraesCS5D01G081000.1 | Wheat | nucleus | 62.9 | 68.27 |
| HORVU5Hr1G018220.2 | Barley | nucleus | 62.9 | 67.72 |
| TraesCS5A01G068900.2 | Wheat | nucleus | 62.65 | 67.46 |
| Os12t0586300-00 | Rice | extracellular | 59.21 | 61.01 |
| HORVU6Hr1G034270.1 | Barley | plastid | 18.43 | 55.97 |
| HORVU2Hr1G006350.1 | Barley | plastid | 18.43 | 55.97 |
| Os03t0241001-00 | Rice | plastid | 19.66 | 55.56 |
| HORVU4Hr1G032990.1 | Barley | cytosol | 8.35 | 53.97 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 35.63 | 42.77 |
| KXG37487 | Sorghum | nucleus | 35.14 | 41.81 |
| GSMUA_Achr6P34680_001 | Banana | nucleus | 37.35 | 40.11 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 36.61 | 40.05 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 31.2 | 39.44 |
| GSMUA_Achr10P... | Banana | nucleus | 36.85 | 38.66 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 31.7 | 38.62 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 35.63 | 38.26 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 36.61 | 38.01 |
| GSMUA_Achr10P... | Banana | nucleus | 36.36 | 37.85 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 33.17 | 36.89 |
| CDY40421 | Canola | nucleus | 14.74 | 36.81 |
| EER95793 | Sorghum | nucleus | 35.14 | 36.39 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 29.73 | 35.59 |
| CDY72117 | Canola | nucleus | 15.72 | 34.97 |
| PGSC0003DMT400066352 | Potato | nucleus | 33.17 | 33.58 |
| Solyc01g108300.2.1 | Tomato | nucleus | 33.42 | 33.58 |
| CDY51048 | Canola | nucleus | 24.82 | 33.55 |
| Bra018794.1-P | Field mustard | nucleus | 24.82 | 33.44 |
| PGSC0003DMT400026096 | Potato | nucleus | 29.98 | 33.42 |
| KRH28514 | Soybean | nucleus | 28.01 | 33.33 |
| KRH50234 | Soybean | nucleus | 33.66 | 33.25 |
| KRH49770 | Soybean | nucleus | 29.98 | 33.24 |
| VIT_03s0063g01060.t01 | Wine grape | nucleus | 32.68 | 33.17 |
| KRG89233 | Soybean | nucleus | 29.73 | 32.88 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 30.96 | 32.64 |
| KRH71185 | Soybean | nucleus | 33.17 | 32.61 |
| Solyc02g090400.2.1 | Tomato | nucleus | 29.24 | 32.08 |
| CDY42715 | Canola | nucleus | 23.1 | 31.97 |
| Bra017795.1-P | Field mustard | nucleus | 22.6 | 31.29 |
| Bra010581.1-P | Field mustard | nucleus | 23.83 | 31.09 |
| CDX69259 | Canola | nucleus | 24.57 | 31.06 |
| AT1G49560.1 | Thale cress | nucleus | 25.31 | 30.93 |
| CDY44057 | Canola | nucleus | 24.32 | 30.84 |
| KRH76947 | Soybean | nucleus | 27.76 | 30.79 |
| KRH04674 | Soybean | nucleus | 27.52 | 30.68 |
| CDY71327 | Canola | nucleus | 25.06 | 30.54 |
| CDY59732 | Canola | nucleus | 19.16 | 30.47 |
| CDX75610 | Canola | nucleus | 24.32 | 30.46 |
| Bra011720.1-P | Field mustard | nucleus | 24.32 | 30.46 |
| Bra040662.1-P | Field mustard | nucleus | 24.32 | 30.37 |
| AT4G37180.2 | Thale cress | nucleus | 27.03 | 30.3 |
| CDX69206 | Canola | nucleus | 11.06 | 28.85 |
| EES15678 | Sorghum | nucleus | 26.04 | 22.94 |
| CDY22459 | Canola | nucleus | 22.85 | 22.85 |
| EES02372 | Sorghum | nucleus | 25.8 | 20.92 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 8.11 | 16.34 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | UniProt:A0A1Z5R6Q6 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | EnsemblPlants:OQU79454 |
| ProteinID:OQU79454 | ProteinID:OQU79454.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31003 | PANTHER:PTHR31003:SF2 |
| InterPro:SANT/Myb | EnsemblPlantsGene:SORBI_3008G147101 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000B423FD7 | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:+:58066831..58070017
Molecular Weight (calculated)
43097.7 Da
IEP (calculated)
7.925
GRAVY (calculated)
-0.667
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MMARKEDHQQ QQQQLRALAA RAVTDSLRAA ASRCSAADRA ARFRDCVRSL EAEKAKMEVF RRELPISVHL VADVIQWLKD ELAQAQHRRH PPPPPPSDLF
101: APATTEAAAA PAPPPQTQAQ AQDGAAVKAD DAEADANDKR SWMSSAQLWS CGSHDDSTAN TNGVAAAAHS KVSTAFMPTL ASPPTLARSP VDAACKLAGA
201: TPVPDLSLSP PPSSAAAAPS ATSSAVTDAD RAQRQHQQAQ AQQQRKARRC WSPELHRRFV AALQRLGGAQ VATPKQIREL MKVDGLTNDE VKSHLQKYRL
301: HTRRASSDVG GGDHLAAAAV GGLWSSSGAA EQQYATSQHS TSQSQSGSPQ GPLQLTTVSS RAMSATAGDS CDGDGDEAEG GGRSESYGWE MQQQQQQQHG
401: TKASSSS
101: APATTEAAAA PAPPPQTQAQ AQDGAAVKAD DAEADANDKR SWMSSAQLWS CGSHDDSTAN TNGVAAAAHS KVSTAFMPTL ASPPTLARSP VDAACKLAGA
201: TPVPDLSLSP PPSSAAAAPS ATSSAVTDAD RAQRQHQQAQ AQQQRKARRC WSPELHRRFV AALQRLGGAQ VATPKQIREL MKVDGLTNDE VKSHLQKYRL
301: HTRRASSDVG GGDHLAAAAV GGLWSSSGAA EQQYATSQHS TSQSQSGSPQ GPLQLTTVSS RAMSATAGDS CDGDGDEAEG GGRSESYGWE MQQQQQQQHG
401: TKASSSS
001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
Arabidopsis Description
HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.