Factsheet for Zm00001d030891_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79454	Sorghum	nucleus	84.15	75.68
TraesCS5B01G075300.1	Wheat	nucleus	66.12	64.19
TraesCS5D01G081000.1	Wheat	nucleus	65.3	63.73
HORVU5Hr1G018220.2	Barley	nucleus	65.3	63.23
TraesCS5A01G068900.2	Wheat	nucleus	65.03	62.96
Os12t0586300-00	Rice	extracellular	62.3	57.72
Os03t0241001-00	Rice	plastid	21.04	53.47
HORVU6Hr1G034270.1	Barley	plastid	19.13	52.24
HORVU2Hr1G006350.1	Barley	plastid	19.13	52.24
HORVU4Hr1G032990.1	Barley	cytosol	8.47	49.21
GSMUA_Achr7P00660_001	Banana	nucleus	38.8	41.89
Zm00001d034160_P001	Maize	nucleus	38.52	41.72
Zm00001d007962_P001	Maize	extracellular, nucleus	38.25	40.58
GSMUA_Achr6P34680_001	Banana	nucleus	40.98	39.58
GSMUA_Achr4P23210_001	Banana	nucleus	40.16	39.52
GSMUA_Achr4P28210_001	Banana	nucleus	34.7	39.44
Zm00001d018698_P001	Maize	nucleus	38.52	38.21
GSMUA_Achr9P09630_001	Banana	mitochondrion, nucleus	34.7	38.02
GSMUA_Achr6P00650_001	Banana	nucleus	39.07	37.73
GSMUA_Achr10P...	Banana	nucleus	39.89	37.34
GSMUA_Achr10P...	Banana	nucleus	39.34	37.11
GSMUA_Achr9P26570_001	Banana	nucleus	39.62	36.99
Zm00001d013202_P001	Maize	nucleus	36.07	36.46
GSMUA_Achr2P13380_001	Banana	nucleus	36.34	36.34
CDY40421	Canola	nucleus	15.3	34.36
CDY72117	Canola	nucleus	16.67	33.33
GSMUA_Achr4P32500_001	Banana	nucleus	30.87	33.24
KRH50234	Soybean	nucleus	37.16	33.01
VIT_07s0197g00060.t01	Wine grape	nucleus	34.43	32.64
PGSC0003DMT400066352	Potato	nucleus	35.79	32.59
CDY51048	Canola	nucleus	26.78	32.56
Bra018794.1-P	Field mustard	nucleus	26.78	32.45
VIT_03s0063g01060.t01	Wine grape	nucleus	35.52	32.42
Solyc01g108300.2.1	Tomato	nucleus	35.79	32.35
CDY42715	Canola	nucleus	25.68	31.97
KRH28514	Soybean	nucleus	29.78	31.87
KRH71185	Soybean	nucleus	35.79	31.64
Bra017795.1-P	Field mustard	nucleus	25.41	31.63
KRH49770	Soybean	nucleus	31.69	31.61
KRG89233	Soybean	nucleus	31.69	31.52
PGSC0003DMT400026096	Potato	nucleus	31.42	31.51
Bra010581.1-P	Field mustard	nucleus	26.5	31.09
CDY44057	Canola	nucleus	27.05	30.84
CDX69259	Canola	nucleus	26.78	30.43
Solyc02g090400.2.1	Tomato	nucleus	30.6	30.19
KRH04674	Soybean	nucleus	30.05	30.14
KRH76947	Soybean	nucleus	29.51	29.43
CDY71327	Canola	nucleus	26.78	29.34
CDX75610	Canola	nucleus	25.96	29.23
Bra011720.1-P	Field mustard	nucleus	25.96	29.23
Bra040662.1-P	Field mustard	nucleus	25.96	29.14
AT4G37180.2	Thale cress	nucleus	28.69	28.93
AT1G49560.1	Thale cress	nucleus	25.96	28.53
CDY59732	Canola	nucleus	19.95	28.52
CDX69206	Canola	nucleus	12.02	28.21
CDY22459	Canola	nucleus	25.14	22.6
Zm00001d023411_P001	Maize	nucleus	27.87	22.52
Zm00001d023402_P001	Maize	nucleus	27.6	22.0
Zm00001d039637_P001	Maize	nucleus	28.14	19.22
CDY29342	Canola	cytosol, mitochondrion, nucleus	8.47	15.35

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A1D6KET4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	ProteinID:ONM01656.1	PFscan:PS51294
PANTHER:PTHR31003	PANTHER:PTHR31003:SF2	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000842F95E	EnsemblPlantsGene:Zm00001d030891
EnsemblPlants:Zm00001d030891_P001	EnsemblPlants:Zm00001d030891_T001	SEG:seg	:	:	:

Description

G2-like-transcription factor 9Homeodomain-like superfamily protein

Coordinates

chr1:-:166009842..166012367

Molecular Weight (calculated)

38341.5 Da

IEP (calculated)

9.585

GRAVY (calculated)

-0.531

Length

366 amino acids

Sequence
(BLAST)

001: MMAGNEDQLR AVAARAVTDS LRAAASRCSA ADRAARFRDC VRSLEAEKAK MEVFRRELPI SVHLVADVID WLKEELAQHR RRPSDLFAPP APPPPAKDGA
101: VLADADANDK RSWMSSVQLW SCGSHDDSTA NTNGAAAAAH KVRSAGVSSA FVALAASPPA PTLARPSGDA AGKPGASASA MPVADLSLSS PAAAASPSAA
201: SSAVTDAAGA HRRQHAQQRK ARRCWSPGLH RRFVAALQRL GGAQVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTRRAS SDGGDQHAGG LWSSAPEQQY
301: TTSQHSTSQS QSQSGSPQGP LQLAVSSRAM SATAGDSCDA GDEAQGGRSE SYGWEMPQHG TKASSS

Best Arabidopsis Sequence Match ( AT1G68670.1 )
(BLAST)

001: MMVEMDYAKK MQKCHEYVEA LEEEQKKIQV FQRELPLCLE LVTQAIEACR KELSGTTTTT SEQCSEQTTS VCGGPVFEEF IPIKKISSLC EEVQEEEEED
101: GEHESSPELV NNKKSDWLRS VQLWNHSPDL NPKEERVAKK AKVVEVKPKS GAFQPFQKRV LETDLQPAVK VASSMPATTT SSTTETCGGK SDLIKAGDEE
201: RRIEQQQSQS HTHRKQRRCW SPELHRRFLN ALQQLGGSHV ATPKQIRDHM KVDGLTNDEV KSHLQKYRLH TRRPAATSVA AQSTGNQQQP QFVVVGGIWV
301: PSSQDFPPPS DVANKGGVYA PVAVAQSPKR SLERSCNSPA ASSSTNTNTS TPVS

Arabidopsis Description

HHO2Transcription factor HHO2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZS3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.