Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P23210_001 | Banana | nucleus | 69.91 | 63.71 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 59.88 | 63.04 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 61.36 | 56.83 |
| GSMUA_Achr10P... | Banana | nucleus | 61.06 | 53.35 |
| GSMUA_Achr6P34680_001 | Banana | nucleus | 58.11 | 51.98 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 50.44 | 51.2 |
| GSMUA_Achr10P... | Banana | nucleus | 57.23 | 49.62 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 55.46 | 47.96 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 47.79 | 47.65 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 48.67 | 43.54 |
| TraesCS5D01G081000.1 | Wheat | nucleus | 44.84 | 40.53 |
| CDY40421 | Canola | nucleus | 19.47 | 40.49 |
| TraesCS5A01G068900.2 | Wheat | nucleus | 44.84 | 40.21 |
| KXG37487 | Sorghum | nucleus | 40.41 | 40.06 |
| TraesCS5B01G075300.1 | Wheat | nucleus | 44.54 | 40.05 |
| Zm00001d034160_P001 | Maize | nucleus | 39.82 | 39.94 |
| HORVU5Hr1G018220.2 | Barley | nucleus | 43.36 | 38.89 |
| Os03t0241001-00 | Rice | plastid | 16.52 | 38.89 |
| TraesCS2A01G264800.1 | Wheat | nucleus | 40.71 | 38.87 |
| HORVU2Hr1G006350.1 | Barley | plastid | 15.34 | 38.81 |
| Zm00001d030891_P001 | Maize | nucleus | 41.89 | 38.8 |
| Os12t0586300-00 | Rice | extracellular | 44.84 | 38.48 |
| VIT_03s0063g01060.t01 | Wine grape | nucleus | 45.43 | 38.4 |
| TraesCS2D01G259200.2 | Wheat | nucleus | 39.82 | 37.92 |
| CDY72117 | Canola | nucleus | 20.35 | 37.7 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 42.77 | 37.56 |
| CDX75610 | Canola | nucleus | 35.99 | 37.54 |
| Os07t0119300-01 | Rice | nucleus | 39.23 | 37.46 |
| KRH71185 | Soybean | nucleus | 45.72 | 37.44 |
| CDY42715 | Canola | nucleus | 32.45 | 37.41 |
| Bra017795.1-P | Field mustard | nucleus | 32.45 | 37.41 |
| Zm00001d007962_P001 | Maize | extracellular, nucleus | 38.05 | 37.39 |
| HORVU6Hr1G034270.1 | Barley | plastid | 14.75 | 37.31 |
| CDX69259 | Canola | nucleus | 35.4 | 37.27 |
| KRH50234 | Soybean | nucleus | 45.13 | 37.14 |
| TraesCS5A01G401600.1 | Wheat | nucleus | 36.58 | 37.13 |
| PGSC0003DMT400026096 | Potato | nucleus | 39.82 | 36.99 |
| KRG89233 | Soybean | nucleus | 40.12 | 36.96 |
| Bra011720.1-P | Field mustard | nucleus | 35.4 | 36.92 |
| Bra010581.1-P | Field mustard | nucleus | 33.92 | 36.86 |
| Os03t0764600-01 | Rice | nucleus | 37.76 | 36.78 |
| CDY44057 | Canola | nucleus | 34.51 | 36.45 |
| TraesCS5B01G406300.2 | Wheat | nucleus | 35.69 | 36.23 |
| CDY51048 | Canola | nucleus | 32.15 | 36.21 |
| Bra018794.1-P | Field mustard | nucleus | 32.15 | 36.09 |
| Solyc02g090400.2.1 | Tomato | nucleus | 39.23 | 35.85 |
| Zm00001d013202_P001 | Maize | nucleus | 38.05 | 35.64 |
| OQU79454 | Sorghum | nucleus | 42.77 | 35.63 |
| KRH49770 | Soybean | nucleus | 38.35 | 35.42 |
| KRH28514 | Soybean | nucleus | 35.69 | 35.38 |
| PGSC0003DMT400066352 | Potato | nucleus | 41.59 | 35.07 |
| Zm00001d018698_P001 | Maize | nucleus | 38.05 | 34.96 |
| Solyc01g108300.2.1 | Tomato | nucleus | 41.3 | 34.57 |
| TraesCS2B01G277300.1 | Wheat | nucleus | 40.41 | 34.08 |
| KRH76947 | Soybean | nucleus | 36.28 | 33.52 |
| KRH04674 | Soybean | nucleus | 35.99 | 33.42 |
| CDY71327 | Canola | nucleus | 32.74 | 33.23 |
| GSMUA_Achr1P23220_001 | Banana | nucleus | 25.96 | 33.21 |
| GSMUA_Achr10P... | Banana | nucleus | 30.09 | 32.9 |
| EER95793 | Sorghum | nucleus | 38.05 | 32.82 |
| Bra040662.1-P | Field mustard | nucleus | 31.56 | 32.82 |
| CDY59732 | Canola | nucleus | 24.78 | 32.81 |
| AT1G49560.1 | Thale cress | nucleus | 32.15 | 32.73 |
| AT4G37180.2 | Thale cress | nucleus | 34.51 | 32.23 |
| GSMUA_Achr6P09870_001 | Banana | nucleus | 32.15 | 32.06 |
| CDX69206 | Canola | nucleus | 14.75 | 32.05 |
| TraesCS5D01G411800.1 | Wheat | plastid | 36.87 | 31.73 |
| HORVU2Hr1G062670.3 | Barley | plastid | 40.41 | 31.64 |
| GSMUA_Achr4P03680_001 | Banana | nucleus | 27.43 | 30.19 |
| GSMUA_Achr4P13650_001 | Banana | plastid | 14.45 | 29.7 |
| GSMUA_Achr6P05330_001 | Banana | nucleus | 35.99 | 28.91 |
| HORVU4Hr1G032990.1 | Barley | cytosol | 5.31 | 28.57 |
| GSMUA_Achr10P... | Banana | nucleus | 33.33 | 28.32 |
| GSMUA_Achr8P18270_001 | Banana | nucleus | 30.97 | 28.3 |
| CDY22459 | Canola | nucleus | 32.74 | 27.27 |
| GSMUA_Achr11P... | Banana | nucleus | 29.5 | 27.1 |
| GSMUA_Achr3P21090_001 | Banana | nucleus | 29.5 | 26.81 |
| HORVU5Hr1G097560.4 | Barley | nucleus, plastid | 32.74 | 24.34 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 13.57 | 22.77 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr7G00660_001 | EnsemblPlants:GSMUA_Achr7P00660_001 | EnsemblPlants:GSMUA_Achr7T00660_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0TDK6 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31003 | PANTHER:PTHR31003:SF2 |
| InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0002969A70 | SEG:seg | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G00660_001]
Coordinates
chr7:-:550972..552768
Molecular Weight (calculated)
37730.4 Da
IEP (calculated)
8.736
GRAVY (calculated)
-0.773
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGGFVKEAS AIGSGDGGRA ARLEESIKSL EEEKRKIEAF KRELPLCMLL LSEVIEGLNK EIQRCRGDRF GCVFEEFIPM KSKVEEDGRV KAETDCKDKK
101: NWMSSAQLWS DNHSDNDDDD KAHANIISEE VKKKKRNLYG YHRNFFSECK NRNGGGAFVP FKRLSSFAAS SKEEEKPPPA LPDLSLQSPA IENTPGLVTC
201: AAEDHRPPRK ARRCWSQELH RRFVLAIQQL GGAQVATPKQ IREQMKVDGL TNDEVKSHLQ KYRLHARRVH NASATADRPV VGEGLWIPQK QYAGSSRRSA
301: SRSGSPQSPL HLAASAHALS ITAGDSSEED GKSESCSWK
101: NWMSSAQLWS DNHSDNDDDD KAHANIISEE VKKKKRNLYG YHRNFFSECK NRNGGGAFVP FKRLSSFAAS SKEEEKPPPA LPDLSLQSPA IENTPGLVTC
201: AAEDHRPPRK ARRCWSQELH RRFVLAIQQL GGAQVATPKQ IREQMKVDGL TNDEVKSHLQ KYRLHARRVH NASATADRPV VGEGLWIPQK QYAGSSRRSA
301: SRSGSPQSPL HLAASAHALS ITAGDSSEED GKSESCSWK
001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
Arabidopsis Description
HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.