Factsheet for Os07t0119300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G264800.1	Wheat	nucleus	72.11	72.11
TraesCS2D01G259200.2	Wheat	nucleus	72.11	71.91
Zm00001d007962_P001	Maize	extracellular, nucleus	67.04	68.99
Zm00001d018698_P001	Maize	nucleus	68.73	66.12
EER95793	Sorghum	nucleus	70.7	63.87
TraesCS2B01G277300.1	Wheat	nucleus	71.83	63.43
HORVU2Hr1G062670.3	Barley	plastid	71.27	58.43
Os03t0764600-01	Rice	nucleus	53.52	54.6
Os03t0241001-00	Rice	plastid	16.06	39.58
GSMUA_Achr10P...	Banana	nucleus	43.1	39.43
GSMUA_Achr7P00660_001	Banana	nucleus	37.46	39.23
GSMUA_Achr10P...	Banana	nucleus	42.82	38.87
GSMUA_Achr4P23210_001	Banana	nucleus	39.72	37.9
GSMUA_Achr9P26570_001	Banana	nucleus	41.69	37.76
GSMUA_Achr6P34680_001	Banana	nucleus	39.72	37.2
VIT_03s0063g01060.t01	Wine grape	nucleus	41.97	37.16
Os12t0586300-00	Rice	extracellular	41.13	36.96
GSMUA_Achr4P28210_001	Banana	nucleus	33.52	36.96
GSMUA_Achr9P09630_001	Banana	mitochondrion, nucleus	34.65	36.83
CDY40421	Canola	nucleus	16.62	36.2
GSMUA_Achr6P00650_001	Banana	nucleus	38.59	36.15
GSMUA_Achr2P13380_001	Banana	nucleus	37.18	36.07
KRH28514	Soybean	nucleus	33.8	35.09
Bra017795.1-P	Field mustard	nucleus	29.01	35.03
CDY72117	Canola	nucleus	18.03	34.97
CDY42715	Canola	nucleus	28.73	34.69
KRH71185	Soybean	nucleus	40.28	34.54
GSMUA_Achr4P32500_001	Banana	nucleus	32.96	34.41
Bra018794.1-P	Field mustard	nucleus	29.01	34.11
PGSC0003DMT400066352	Potato	nucleus	38.59	34.08
PGSC0003DMT400026096	Potato	nucleus	34.93	33.97
KRG89233	Soybean	nucleus	35.21	33.97
CDY51048	Canola	nucleus	28.73	33.89
CDX69259	Canola	nucleus	30.7	33.85
KRH50234	Soybean	nucleus	39.15	33.74
CDY59732	Canola	nucleus	24.23	33.59
Solyc01g108300.2.1	Tomato	nucleus	38.31	33.58
CDX75610	Canola	nucleus	30.7	33.54
Bra011720.1-P	Field mustard	nucleus	30.7	33.54
KRH49770	Soybean	nucleus	34.65	33.52
CDY44057	Canola	nucleus	30.14	33.33
Bra010581.1-P	Field mustard	nucleus	29.3	33.33
VIT_07s0197g00060.t01	Wine grape	nucleus	36.06	33.16
Solyc02g090400.2.1	Tomato	nucleus	34.37	32.88
KRH76947	Soybean	nucleus	33.8	32.7
KRH04674	Soybean	nucleus	33.24	32.33
CDY71327	Canola	nucleus	30.14	32.04
Bra040662.1-P	Field mustard	nucleus	29.3	31.9
AT1G49560.1	Thale cress	nucleus	29.01	30.93
AT4G37180.2	Thale cress	nucleus	30.14	29.48
CDX69206	Canola	nucleus	12.39	28.21
CDY22459	Canola	nucleus	28.45	24.82
Os02t0325600-01	Rice	nucleus	27.32	23.54
Os01t0176700-01	Rice	nucleus	29.01	21.59
CDY29342	Canola	cytosol, mitochondrion, nucleus	12.11	21.29

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EntrezGene:4342269	EMBL:AK070421	ProteinID:BAC79732.1	ProteinID:BAF20684.1
ProteinID:BAS99833.1	ProteinID:EAZ38517.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	EnsemblPlantsGene:Os07g0119300	EnsemblPlants:Os07t0119300-01	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR31003	PANTHER:PTHR31003:SF15	UniProt:Q7XIF1	InterPro:SANT/Myb	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI00001B39F4	RefSeq:XP_015644652.1	SEG:seg	:	:

Description

Homeodomain-related domain containing protein. (Os07t0119300-01)

Coordinates

chr7:+:1046046..1047972

Molecular Weight (calculated)

38074.0 Da

IEP (calculated)

6.922

GRAVY (calculated)

-0.536

Length

355 amino acids

Sequence
(BLAST)

001: MGLDVGEIGV GAADLSLDLK MFAAKSFGRV RGKDTTTTAM GDCIRRLEEE MGKIEVFRRE LPLCVRLLAD VIDVMKEEVE KKGGDRKEDE EDAAGDKSNW
101: MSTAQLWTGN SGGPDAAAAD PEKQDKVRIS SEAKSNGGAF VGSGAPAFAR PKQSLMRKED MAYDVRMPDL SLLSPPASAA AADESRRQVV GFSQAAARAA
201: AMAASGPALS LQPQPQPAAA QQQQQARKTR RCWSPDLHRK FVAALQQLGG PQVATPKQIR ELMKVDGLTN DEVKSHLQKY RLHNRPRVPS STIVNQPIVL
301: MQGLCYIPQE QSSSQSGSPE GPLHFSGSGM AGGGSSAATV SCEEEDGRSE SYGWK

Best Arabidopsis Sequence Match ( AT2G03500.1 )
(BLAST)

001: MASSSELSLD CKPQSYSMLL KSFGDNFQSD PTTHKLEDLL SRLEQERLKI DAFKRELPLC MQLLNNAVEV YKQQLEAYRA NSNNNNQSVG TRPVLEEFIP
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF

Arabidopsis Description

EFMMyb family transcription factor EFM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ85]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.