Factsheet for Os03t0764600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034160_P001	Maize	nucleus	62.36	64.2
KXG37487	Sorghum	nucleus	62.64	63.74
TraesCS5B01G406300.2	Wheat	nucleus	60.92	63.47
TraesCS5A01G401600.1	Wheat	nucleus	60.92	63.47
Zm00001d013202_P001	Maize	nucleus	58.33	56.08
TraesCS5D01G411800.1	Wheat	plastid	61.21	54.06
Os07t0119300-01	Rice	nucleus	54.6	53.52
GSMUA_Achr6P34680_001	Banana	nucleus	43.1	39.58
GSMUA_Achr9P26570_001	Banana	nucleus	44.54	39.54
GSMUA_Achr10P...	Banana	nucleus	43.97	39.13
HORVU5Hr1G097560.4	Barley	nucleus, plastid	50.86	38.82
GSMUA_Achr10P...	Banana	nucleus	43.1	38.66
GSMUA_Achr9P09630_001	Banana	mitochondrion, nucleus	36.49	38.02
GSMUA_Achr7P00660_001	Banana	nucleus	36.78	37.76
GSMUA_Achr4P28210_001	Banana	nucleus	34.48	37.27
Os12t0586300-00	Rice	extracellular	42.24	37.22
GSMUA_Achr2P13380_001	Banana	nucleus	39.08	37.16
GSMUA_Achr4P23210_001	Banana	nucleus	39.37	36.83
Bra018794.1-P	Field mustard	nucleus	31.61	36.42
CDY51048	Canola	nucleus	31.32	36.21
KRH28514	Soybean	nucleus	34.77	35.38
GSMUA_Achr6P00650_001	Banana	nucleus	38.22	35.09
CDY40421	Canola	nucleus	16.38	34.97
CDX69259	Canola	nucleus	31.61	34.16
Os03t0241001-00	Rice	plastid	14.08	34.03
CDY59732	Canola	nucleus	25.0	33.98
CDY71327	Canola	nucleus	32.47	33.83
CDY42715	Canola	nucleus	28.45	33.67
Bra017795.1-P	Field mustard	nucleus	28.45	33.67
VIT_03s0063g01060.t01	Wine grape	nucleus	38.79	33.67
AT1G49560.1	Thale cress	nucleus	32.18	33.63
CDX75610	Canola	nucleus	31.32	33.54
Bra011720.1-P	Field mustard	nucleus	31.32	33.54
GSMUA_Achr4P32500_001	Banana	nucleus	32.76	33.53
Bra040662.1-P	Field mustard	nucleus	31.32	33.44
Bra010581.1-P	Field mustard	nucleus	29.6	33.01
KRG89233	Soybean	nucleus	34.48	32.61
KRH50234	Soybean	nucleus	38.51	32.52
CDY44057	Canola	nucleus	29.89	32.4
VIT_07s0197g00060.t01	Wine grape	nucleus	35.92	32.38
KRH71185	Soybean	nucleus	38.51	32.37
KRH49770	Soybean	nucleus	33.62	31.88
CDY72117	Canola	nucleus	16.67	31.69
KRH76947	Soybean	nucleus	33.33	31.61
PGSC0003DMT400066352	Potato	nucleus	36.21	31.34
Solyc01g108300.2.1	Tomato	nucleus	36.21	31.11
KRH04674	Soybean	nucleus	32.18	30.68
AT4G37180.2	Thale cress	nucleus	31.61	30.3
PGSC0003DMT400026096	Potato	nucleus	31.61	30.14
CDX69206	Canola	nucleus	13.22	29.49
Solyc02g090400.2.1	Tomato	nucleus	31.32	29.38
CDY22459	Canola	nucleus	28.74	24.57
Os02t0325600-01	Rice	nucleus	28.16	23.79
Os01t0176700-01	Rice	nucleus	31.9	23.27
CDY29342	Canola	cytosol, mitochondrion, nucleus	11.21	19.31

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EntrezGene:4334216	ProteinID:AAP50967.1	ProteinID:ABF99033.1	EMBL:AK105625
ProteinID:BAF13283.1	ProteinID:BAS86540.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	EnsemblPlantsGene:Os03g0764600	EnsemblPlants:Os03t0764600-01
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31003	PANTHER:PTHR31003:SF6	UniProt:Q7Y0B7	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00001A3B0F	RefSeq:XP_015631206.1	SEG:seg	:

Description

Homeodomain-like containing protein. (Os03t0764600-01)

Coordinates

chr3:+:31643909..31645862

Molecular Weight (calculated)

37302.0 Da

IEP (calculated)

7.506

GRAVY (calculated)

-0.502

Length

348 amino acids

Sequence
(BLAST)

001: MGLDVGEIGM GLDLSLDLKM FAARSAVRMA AAAAKEATGV EACIRSLEEE RRKIEMFRRE LPLCARLLAD VIELMKEEAG KRRKDGDDAE AKAEDGDKTK
101: WMSTAQLWVD SRGSDADSEN DRRSGSTSPA SRLLGGAEES SSRAVAPPPY FRREERVVLR PAMPLLPPAS HRSPPPAAAA AATAAGDDHR HVVASSFATA
201: VPSPVPAALS LQAQAQQQQQ QARKSRRCWS PELHRQFVAA LQQLGGPQVA TPKQIREVMK VDGLTNDEVK SHLQKYRLHN RKSPGTASAS HSIVLVGDLW
301: ASQEVSCSQS GSPQGPLQLS GSGVAVSAAT AGDSCCEDDD KSEGYVRK

Best Arabidopsis Sequence Match ( AT4G37180.1 )
(BLAST)

001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL

Arabidopsis Description

HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.