Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G406300.2 | Wheat | nucleus | 81.73 | 96.41 |
| TraesCS5A01G401600.1 | Wheat | nucleus | 81.73 | 96.41 |
| HORVU5Hr1G097560.4 | Barley | nucleus, plastid | 72.59 | 62.72 |
| KXG37487 | Sorghum | nucleus | 53.55 | 61.7 |
| Os03t0764600-01 | Rice | nucleus | 54.06 | 61.21 |
| Zm00001d034160_P001 | Maize | nucleus | 52.03 | 60.65 |
| Zm00001d013202_P001 | Maize | nucleus | 51.27 | 55.8 |
| TraesCS2D01G259200.2 | Wheat | nucleus | 47.46 | 52.53 |
| GSMUA_Achr6P34680_001 | Banana | nucleus | 37.56 | 39.05 |
| GSMUA_Achr10P... | Banana | nucleus | 37.31 | 37.89 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 37.31 | 37.5 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 31.73 | 36.87 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 29.95 | 36.65 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 33.5 | 36.07 |
| GSMUA_Achr10P... | Banana | nucleus | 35.79 | 36.06 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 30.46 | 35.93 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 30.96 | 35.88 |
| TraesCS5D01G081000.1 | Wheat | nucleus | 34.01 | 35.73 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 33.5 | 35.48 |
| CDX69259 | Canola | nucleus | 28.93 | 35.4 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 33.5 | 34.83 |
| Bra010581.1-P | Field mustard | nucleus | 27.41 | 34.62 |
| Bra011720.1-P | Field mustard | nucleus | 28.43 | 34.46 |
| CDX75610 | Canola | nucleus | 28.43 | 34.46 |
| Bra018794.1-P | Field mustard | nucleus | 26.4 | 34.44 |
| CDY51048 | Canola | nucleus | 26.14 | 34.22 |
| CDY44057 | Canola | nucleus | 27.66 | 33.96 |
| Bra017795.1-P | Field mustard | nucleus | 24.87 | 33.33 |
| CDY42715 | Canola | nucleus | 24.87 | 33.33 |
| KRG89233 | Soybean | nucleus | 30.96 | 33.15 |
| KRH28514 | Soybean | nucleus | 28.68 | 33.04 |
| CDY71327 | Canola | nucleus | 27.66 | 32.63 |
| CDY40421 | Canola | nucleus | 13.45 | 32.52 |
| Bra040662.1-P | Field mustard | nucleus | 26.9 | 32.52 |
| VIT_03s0063g01060.t01 | Wine grape | nucleus | 32.99 | 32.42 |
| AT1G49560.1 | Thale cress | nucleus | 27.16 | 32.13 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 31.47 | 32.12 |
| CDY59732 | Canola | nucleus | 20.81 | 32.03 |
| KRH49770 | Soybean | nucleus | 29.44 | 31.61 |
| CDY72117 | Canola | nucleus | 14.47 | 31.15 |
| KRH76947 | Soybean | nucleus | 28.68 | 30.79 |
| Solyc02g090400.2.1 | Tomato | nucleus | 28.93 | 30.73 |
| PGSC0003DMT400026096 | Potato | nucleus | 28.43 | 30.68 |
| PGSC0003DMT400066352 | Potato | nucleus | 31.22 | 30.6 |
| AT4G37180.2 | Thale cress | nucleus | 28.17 | 30.58 |
| Solyc01g108300.2.1 | Tomato | nucleus | 31.22 | 30.37 |
| KRH50234 | Soybean | nucleus | 31.47 | 30.1 |
| KRH71185 | Soybean | nucleus | 30.96 | 29.47 |
| KRH04674 | Soybean | nucleus | 26.9 | 29.04 |
| CDX69206 | Canola | nucleus | 11.17 | 28.21 |
| CDY22459 | Canola | nucleus | 26.65 | 25.8 |
| TraesCS2D01G119100.1 | Wheat | nucleus | 24.37 | 23.88 |
| TraesCS3D01G125300.1 | Wheat | nucleus | 27.66 | 23.09 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 9.39 | 18.32 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G411800.1 | EnsemblPlantsGene:TraesCS5D01G411800 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | InterPro:SANT/Myb |
| PANTHER:PTHR31003 | PANTHER:PTHR31003:SF6 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | MapMan:15.5.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:475209615..475211289
Molecular Weight (calculated)
43014.6 Da
IEP (calculated)
8.869
GRAVY (calculated)
-0.416
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAPSFQIPH HIPILLLSNQ TFSERYQLPS ILLPSPPRFP SIGSGGVFPG YPCVSVCMGL DVGEIGMPLD LGLDLKLFVA KTAGRLAAAA KEAPAVDACI
101: RGLEEERRKI EVFRRELPLC ARLLADVIEF MKEEAAKRSE RRDADDNDKR KWMSTAQLWV DSRATDAADP VKEQRKESAL SKPMLLGGAI GAPMAASCRA
201: MPPPAAPQYF GRDDKIVGTQ GLPALPMISP AANRQFSPPV DDRHQAFAAK FAAPMPPPGP GLQTHDQQSR KTRRCWSPEL HRHFVAALHQ LGGPQVATPK
301: QIREMMKVDG LTNDEVKSHL QKYRLHNQRC PSSSSASHPV MLVGDLWAHQ EQSSSQSRSP EGPLQLSVSG VAVSALTGSD SSEEDGRSVG YSRR
101: RGLEEERRKI EVFRRELPLC ARLLADVIEF MKEEAAKRSE RRDADDNDKR KWMSTAQLWV DSRATDAADP VKEQRKESAL SKPMLLGGAI GAPMAASCRA
201: MPPPAAPQYF GRDDKIVGTQ GLPALPMISP AANRQFSPPV DDRHQAFAAK FAAPMPPPGP GLQTHDQQSR KTRRCWSPEL HRHFVAALHQ LGGPQVATPK
301: QIREMMKVDG LTNDEVKSHL QKYRLHNQRC PSSSSASHPV MLVGDLWAHQ EQSSSQSRSP EGPLQLSVSG VAVSALTGSD SSEEDGRSVG YSRR
001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
Arabidopsis Description
HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.