CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89233	Soybean	nucleus	90.46	90.22
VIT_03s0063g01060.t01	Wine grape	nucleus	56.95	52.12
KRH50234	Soybean	nucleus	57.49	51.21
KRH71185	Soybean	nucleus	56.68	50.24
Solyc01g108300.2.1	Tomato	nucleus	52.59	47.65
PGSC0003DMT400066352	Potato	nucleus	51.77	47.26
KRH28514	Soybean	nucleus	35.97	38.6
GSMUA_Achr4P28210_001	Banana	nucleus	33.79	38.51
GSMUA_Achr7P00660_001	Banana	nucleus	35.42	38.35
CDY51048	Canola	nucleus	31.34	38.21
CDY59732	Canola	nucleus	26.43	37.89
Bra018794.1-P	Field mustard	nucleus	31.06	37.75
GSMUA_Achr9P09630_001	Banana	mitochondrion, nucleus	34.33	37.72
Bra040662.1-P	Field mustard	nucleus	33.24	37.42
GSMUA_Achr10P...	Banana	nucleus	39.51	37.37
KRH76947	Soybean	nucleus	36.51	36.51
GSMUA_Achr6P34680_001	Banana	nucleus	37.6	36.41
TraesCS5A01G401600.1	Wheat	nucleus	32.97	36.23
CDY71327	Canola	nucleus	32.7	35.93
GSMUA_Achr9P26570_001	Banana	nucleus	38.15	35.71
Zm00001d007962_P001	Maize	extracellular, nucleus	33.52	35.65
KRH04674	Soybean	nucleus	35.42	35.62
GSMUA_Achr6P00650_001	Banana	nucleus	36.24	35.09
TraesCS5B01G406300.2	Wheat	nucleus	31.88	35.03
GSMUA_Achr4P32500_001	Banana	nucleus	32.15	34.71
GSMUA_Achr4P23210_001	Banana	nucleus	35.15	34.68
TraesCS2A01G264800.1	Wheat	nucleus	33.52	34.65
Os07t0119300-01	Rice	nucleus	33.52	34.65
TraesCS2D01G259200.2	Wheat	nucleus	33.52	34.55
AT1G49560.1	Thale cress	nucleus	31.34	34.53
GSMUA_Achr10P...	Banana	nucleus	36.78	34.53
Zm00001d034160_P001	Maize	nucleus	31.61	34.32
KXG37487	Sorghum	nucleus	31.88	34.21
Zm00001d013202_P001	Maize	nucleus	33.24	33.7
Os03t0764600-01	Rice	nucleus	31.88	33.62
Zm00001d018698_P001	Maize	nucleus	33.52	33.33
HORVU5Hr1G018220.2	Barley	nucleus	33.52	32.54
EER95793	Sorghum	nucleus	34.6	32.32
TraesCS5D01G081000.1	Wheat	nucleus	32.97	32.27
GSMUA_Achr2P13380_001	Banana	nucleus	32.15	32.24
TraesCS5A01G068900.2	Wheat	nucleus	32.97	32.01
TraesCS5B01G075300.1	Wheat	nucleus	32.7	31.83
Zm00001d030891_P001	Maize	nucleus	31.61	31.69
Os12t0586300-00	Rice	extracellular	33.79	31.39
TraesCS2B01G277300.1	Wheat	nucleus	33.79	30.85
OQU79454	Sorghum	nucleus	33.24	29.98
Os03t0241001-00	Rice	plastid	11.72	29.86
TraesCS5D01G411800.1	Wheat	plastid	31.61	29.44
CDY29342	Canola	cytosol, mitochondrion, nucleus	15.8	28.71
HORVU2Hr1G062670.3	Barley	plastid	33.52	28.41
KRH34759	Soybean	nucleus	28.88	27.68
HORVU2Hr1G006350.1	Barley	plastid	10.08	27.61
KRG92028	Soybean	nucleus	28.07	27.03
KRH56661	Soybean	nucleus	33.24	26.87
HORVU6Hr1G034270.1	Barley	plastid	9.81	26.87
KRH03776	Soybean	nucleus	32.97	26.77
KRH70595	Soybean	nucleus	26.98	26.68
KRH75476	Soybean	nucleus	26.98	26.12
KRH63037	Soybean	nucleus	32.7	25.97
KRH54846	Soybean	nucleus	32.97	25.91
HORVU5Hr1G097560.4	Barley	nucleus, plastid	26.98	21.71
HORVU4Hr1G032990.1	Barley	cytosol	2.18	12.7

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100803341	MapMan:15.5.2.3	EMBL:ACUP02004637	EnsemblPlantsGene:GLYMA_07G178500	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1KL26	InterPro:IPR017930	EnsemblPlants:KRH49770
ProteinID:KRH49770	ProteinID:KRH49770.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR31003	PANTHER:PTHR31003:SF7	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002337D53

Description

hypothetical protein

Coordinates

chr7:-:34202548..34205655

Molecular Weight (calculated)

41151.8 Da

IEP (calculated)

7.626

GRAVY (calculated)

-0.687

Length

367 amino acids

Sequence
(BLAST)

001: MGLVIPEEEL SLDLRPSFVP KTITDFLCHL STTPNASVKV SLLDDFVHRL QLELAKIQAF KRELPLCMFL LNDAISALKV ESEKCMACKS EPVLEEFIPL
101: KKECDQREES EKEKECRDKK SWMSSFQLWN TDDKADINNN AYECDKKQNY GVEDKNNREE RKSVAKDLFQ YGGIRNGEKG FVMPFSTYPA SKEVKEDCVF
201: NGLSLQTPGT AVKNTREGSG CRTSSCRVVS SAPSPLRQPQ SGRKQRRCWS PELHSRFVKA LEELGGSQAT TPKQIRELMR VDGLTNDEVK SHLQKYRLHT
301: QRVPVAKAAN SNRSAVALGG LWMHNESLKG RSSGSPQGPL QLATQSGEAT SRTEGDNMID DDVKSDL

Best Arabidopsis Sequence Match ( AT4G37180.2 )
(BLAST)

001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEEIVFL CVAIGALKDE ARKGLSLMAS
101: NGKFDDVERA KPETDKKSWM SSAQLWISNP NSQFRSTNEE EEDRCVSQNP FQTCNYPNQG GVFMPFNRPP PPPPPAPLSL MTPTSEMMMD YSRIEQSHHH
201: HQFNKPSSQS HHIQKKEQRR RWSQELHRKF VDALHRLGGP QVATPKQIRD LMKVDGLTND EVKSHLQKYR MHIRKHPLHP TKTLSSSDQP GVLERESQSL
301: ISLSRSDSPQ SPLVARGLFS SNVGHSSEED EEEEDEEEEK SDGRSSCRND ETKKKRQVLD LEL

Arabidopsis Description

HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.