Factsheet for HORVU5Hr1G018220.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
Predotar:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G032990.1	Barley	cytosol	16.14	96.83
TraesCS5D01G081000.1	Wheat	nucleus	93.65	94.4
TraesCS5A01G068900.2	Wheat	nucleus	94.18	94.18
TraesCS5B01G075300.1	Wheat	nucleus	93.65	93.9
HORVU6Hr1G034270.1	Barley	plastid	28.84	81.34
HORVU2Hr1G006350.1	Barley	plastid	28.57	80.6
Os12t0586300-00	Rice	extracellular	69.05	66.08
Zm00001d030891_P001	Maize	nucleus	63.23	65.3
OQU79454	Sorghum	nucleus	67.72	62.9
Os03t0241001-00	Rice	plastid	20.9	54.86
GSMUA_Achr7P00660_001	Banana	nucleus	38.89	43.36
GSMUA_Achr4P23210_001	Banana	nucleus	42.06	42.74
GSMUA_Achr6P34680_001	Banana	nucleus	41.8	41.69
GSMUA_Achr10P...	Banana	nucleus	42.59	41.49
GSMUA_Achr4P28210_001	Banana	nucleus	35.19	41.3
GSMUA_Achr9P26570_001	Banana	nucleus	41.53	40.05
GSMUA_Achr9P09630_001	Banana	mitochondrion, nucleus	35.19	39.82
GSMUA_Achr10P...	Banana	nucleus	41.01	39.64
GSMUA_Achr2P13380_001	Banana	nucleus	37.83	39.07
GSMUA_Achr6P00650_001	Banana	nucleus	37.57	37.47
CDY40421	Canola	nucleus	16.14	37.42
CDY72117	Canola	nucleus	17.2	35.52
GSMUA_Achr4P32500_001	Banana	nucleus	31.75	35.29
KRH28514	Soybean	nucleus	31.75	35.09
PGSC0003DMT400026096	Potato	nucleus	33.6	34.79
Solyc02g090400.2.1	Tomato	nucleus	34.13	34.77
CDX69259	Canola	nucleus	29.37	34.47
VIT_03s0063g01060.t01	Wine grape	nucleus	36.51	34.41
CDY42715	Canola	nucleus	26.72	34.35
KRH50234	Soybean	nucleus	37.3	34.22
CDY51048	Canola	nucleus	27.25	34.22
Bra018794.1-P	Field mustard	nucleus	27.25	34.11
PGSC0003DMT400066352	Potato	nucleus	36.24	34.08
Solyc01g108300.2.1	Tomato	nucleus	36.51	34.07
KRH71185	Soybean	nucleus	37.04	33.82
KRG89233	Soybean	nucleus	32.8	33.7
Bra017795.1-P	Field mustard	nucleus	26.19	33.67
KRH49770	Soybean	nucleus	32.54	33.52
CDX75610	Canola	nucleus	28.57	33.23
Bra011720.1-P	Field mustard	nucleus	28.57	33.23
VIT_07s0197g00060.t01	Wine grape	nucleus	33.86	33.16
CDY44057	Canola	nucleus	28.04	33.02
Bra010581.1-P	Field mustard	nucleus	27.25	33.01
Bra040662.1-P	Field mustard	nucleus	28.31	32.82
KRH76947	Soybean	nucleus	31.75	32.7
HORVU2Hr1G062670.3	Barley	plastid	37.3	32.56
AT1G49560.1	Thale cress	nucleus	28.31	32.13
CDX69206	Canola	nucleus	13.23	32.05
CDY71327	Canola	nucleus	28.31	32.04
CDY59732	Canola	nucleus	21.69	32.03
AT4G37180.2	Thale cress	nucleus	30.16	31.41
KRH04674	Soybean	nucleus	30.16	31.23
CDY22459	Canola	nucleus	26.45	24.57
HORVU5Hr1G097560.4	Barley	nucleus, plastid	29.63	24.56
HORVU3Hr1G022960.5	Barley	nucleus	29.63	21.5
CDY29342	Canola	cytosol, mitochondrion, nucleus	10.58	19.8
HORVU2Hr1G020140.3	Barley	nucleus, plastid	26.45	19.34

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A287QI91	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU5Hr1G018220	EnsemblPlants:HORVU5Hr1G018220.2	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31003	PANTHER:PTHR31003:SF2	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000B478E5D	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:73387931..73390580

Molecular Weight (calculated)

40301.9 Da

IEP (calculated)

7.955

GRAVY (calculated)

-0.678

Length

378 amino acids

Sequence
(BLAST)

001: MGSSSAVQKE AVVLGGGGGA GEDHRLRALA ARTMTDSLRA AVARSSSAEK VARLEDCARS LEAEKAKMEV FRRELPISVH LIADVIEWLK DEVAQHRRPA
101: PDQLLAPAPS PSPAPLAKRK AEGVKTEADA SDKRSWMSSA QLWTCGSHSS TSNSNGDSAK KHAQKVANAF MPLNGLPNLA KSLERPEAAA MAVPELSLSS
201: PAIDAPCMAA PSADSSAVTD AGAQSQQQSA QRKARRCWSP ELHRRFVAAL QHLGGPQVAT PKQIREMMKV DGLTNDEVKS HLQKYRLHTR RASDGDQQQS
301: ASAGQWPRPD QQYTTSQHSS SQSGSPQGPL QLTVSSRGMS VTIGDSCDGG EENEEEDGKS ASYGWEMQQN GTKASSSS

Best Arabidopsis Sequence Match ( AT4G37180.1 )
(BLAST)

001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL

Arabidopsis Description

HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.