Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G006350.1 | Barley | plastid | 97.76 | 97.76 |
| HORVU4Hr1G032990.1 | Barley | cytosol | 42.54 | 90.48 |
| Os03t0241001-00 | Rice | plastid | 44.78 | 41.67 |
| HORVU5Hr1G018220.2 | Barley | nucleus | 81.34 | 28.84 |
| TraesCS5D01G081000.1 | Wheat | nucleus | 76.87 | 27.47 |
| TraesCS5B01G075300.1 | Wheat | nucleus | 76.87 | 27.32 |
| TraesCS5A01G068900.2 | Wheat | nucleus | 76.12 | 26.98 |
| Os12t0586300-00 | Rice | extracellular | 58.96 | 20.0 |
| Zm00001d030891_P001 | Maize | nucleus | 52.24 | 19.13 |
| OQU79454 | Sorghum | nucleus | 55.97 | 18.43 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 41.79 | 15.05 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 37.31 | 14.75 |
| GSMUA_Achr6P34680_001 | Banana | nucleus | 40.3 | 14.25 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 35.07 | 13.82 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 32.84 | 13.66 |
| GSMUA_Achr10P... | Banana | nucleus | 39.55 | 13.55 |
| GSMUA_Achr10P... | Banana | nucleus | 38.81 | 13.4 |
| CDY59732 | Canola | nucleus | 25.37 | 13.28 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 35.82 | 13.11 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 38.06 | 13.01 |
| CDY51048 | Canola | nucleus | 29.1 | 12.96 |
| Bra018794.1-P | Field mustard | nucleus | 29.1 | 12.91 |
| AT1G49560.1 | Thale cress | nucleus | 32.09 | 12.91 |
| KRH28514 | Soybean | nucleus | 31.34 | 12.28 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 34.33 | 12.14 |
| CDY71327 | Canola | nucleus | 29.85 | 11.98 |
| Bra040662.1-P | Field mustard | nucleus | 29.1 | 11.96 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 34.33 | 11.92 |
| Solyc02g090400.2.1 | Tomato | nucleus | 32.84 | 11.86 |
| KRH76947 | Soybean | nucleus | 32.09 | 11.72 |
| CDY42715 | Canola | nucleus | 25.37 | 11.56 |
| Bra017795.1-P | Field mustard | nucleus | 25.37 | 11.56 |
| PGSC0003DMT400026096 | Potato | nucleus | 31.34 | 11.51 |
| CDX75610 | Canola | nucleus | 27.61 | 11.38 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 28.36 | 11.38 |
| Solyc01g108300.2.1 | Tomato | nucleus | 34.33 | 11.36 |
| KRH04674 | Soybean | nucleus | 30.6 | 11.23 |
| VIT_03s0063g01060.t01 | Wine grape | nucleus | 33.58 | 11.22 |
| PGSC0003DMT400066352 | Potato | nucleus | 33.58 | 11.19 |
| Bra011720.1-P | Field mustard | nucleus | 26.87 | 11.08 |
| KRH50234 | Soybean | nucleus | 33.58 | 10.92 |
| KRH71185 | Soybean | nucleus | 33.58 | 10.87 |
| CDX69259 | Canola | nucleus | 26.12 | 10.87 |
| HORVU2Hr1G062670.3 | Barley | plastid | 34.33 | 10.62 |
| CDY44057 | Canola | nucleus | 25.37 | 10.59 |
| AT4G37180.2 | Thale cress | nucleus | 28.36 | 10.47 |
| CDY40421 | Canola | nucleus | 12.69 | 10.43 |
| Bra010581.1-P | Field mustard | nucleus | 23.88 | 10.26 |
| KRG89233 | Soybean | nucleus | 27.61 | 10.05 |
| KRH49770 | Soybean | nucleus | 26.87 | 9.81 |
| HORVU3Hr1G022960.5 | Barley | nucleus | 36.57 | 9.4 |
| CDY72117 | Canola | nucleus | 12.69 | 9.29 |
| HORVU5Hr1G097560.4 | Barley | nucleus, plastid | 29.1 | 8.55 |
| HORVU2Hr1G020140.3 | Barley | nucleus, plastid | 28.36 | 7.35 |
| CDY22459 | Canola | nucleus | 21.64 | 7.13 |
| CDX69206 | Canola | nucleus | 5.97 | 5.13 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 6.72 | 4.46 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G034270.1 | EnsemblPlantsGene:HORVU6Hr1G034270 | Gene3D:1.10.10.60 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PANTHER:PTHR31003 | PANTHER:PTHR31003:SF2 | PFscan:PS51294 | SEG:seg | TIGRFAMs:TIGR01557 | UniParc:UPI000B47D56D |
| UniProt:A0A287TWY2 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:159864899..159865617
Molecular Weight (calculated)
14416.1 Da
IEP (calculated)
9.234
GRAVY (calculated)
-0.223
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: ISSSFSSSAV FILDFASHLI RKNPNLLGSY SEEVANAFMP LNGLPNLVKS SERPEAAAMA VPELSLSSPA IDAPYMAAPS ADSSAVTDAR AQSQQQSGQR
101: KARRCWLPEL HRRFVAALQH LGGPQVATPK QIRE
101: KARRCWLPEL HRRFVAALQH LGGPQVATPK QIRE
001: MGSLGDELSL GSIFGRGVSM NVVAVEKVDE HVKKLEEEKR KLESCQLELP LSLQILNDAI LYLKDKRCSE METQPLLKDF ISVNKPIQGE RGIELLKREE
101: LMREKKFQQW KANDDHTSKI KSKLEIKRNE EKSPMLLIPK VETGLGLGLS SSSIRRKGIV ASCGFTSNSM PQPPTPAVPQ QPAFLKQQAL RKQRRCWNPE
201: LHRRFVDALQ QLGGPGVATP KQIREHMQEE GLTNDEVKSH LQVTKKKQKV EIFESYSECY
101: LMREKKFQQW KANDDHTSKI KSKLEIKRNE EKSPMLLIPK VETGLGLGLS SSSIRRKGIV ASCGFTSNSM PQPPTPAVPQ QPAFLKQQAL RKQRRCWNPE
201: LHRRFVDALQ QLGGPGVATP KQIREHMQEE GLTNDEVKSH LQVTKKKQKV EIFESYSECY
Arabidopsis Description
HHO6Transcription factor HHO6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.