Factsheet for GSMUA_Achr9P09630_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P34680_001	Banana	nucleus	65.87	58.05
GSMUA_Achr10P...	Banana	nucleus	62.57	53.45
GSMUA_Achr4P28210_001	Banana	nucleus	49.1	50.93
GSMUA_Achr9P26570_001	Banana	nucleus	59.58	50.77
GSMUA_Achr7P00660_001	Banana	nucleus	51.2	50.44
GSMUA_Achr10P...	Banana	nucleus	58.38	50.26
GSMUA_Achr4P23210_001	Banana	nucleus	52.1	46.77
GSMUA_Achr2P13380_001	Banana	nucleus	49.4	45.08
GSMUA_Achr6P00650_001	Banana	nucleus	49.1	43.27
GSMUA_Achr4P32500_001	Banana	nucleus	43.11	42.35
Zm00001d034160_P001	Maize	nucleus	39.82	39.35
KXG37487	Sorghum	nucleus	39.82	38.89
CDY40421	Canola	nucleus	18.26	37.42
Os03t0764600-01	Rice	nucleus	38.02	36.49
Zm00001d007962_P001	Maize	extracellular, nucleus	37.43	36.23
TraesCS5A01G401600.1	Wheat	nucleus	36.23	36.23
CDX69259	Canola	nucleus	34.73	36.02
TraesCS5D01G081000.1	Wheat	nucleus	40.42	36.0
CDY59732	Canola	nucleus	27.54	35.94
TraesCS5B01G406300.2	Wheat	nucleus	35.93	35.93
TraesCS5B01G075300.1	Wheat	nucleus	40.42	35.81
TraesCS2A01G264800.1	Wheat	nucleus	38.02	35.77
TraesCS5A01G068900.2	Wheat	nucleus	40.42	35.71
KRG89233	Soybean	nucleus	39.22	35.6
Os12t0586300-00	Rice	extracellular	41.92	35.44
CDX75610	Canola	nucleus	34.43	35.38
HORVU5Hr1G018220.2	Barley	nucleus	39.82	35.19
TraesCS2D01G259200.2	Wheat	nucleus	37.43	35.11
Bra011720.1-P	Field mustard	nucleus	33.83	34.77
Zm00001d030891_P001	Maize	nucleus	38.02	34.7
VIT_03s0063g01060.t01	Wine grape	nucleus	41.62	34.66
Os07t0119300-01	Rice	nucleus	36.83	34.65
Bra010581.1-P	Field mustard	nucleus	32.34	34.62
Zm00001d013202_P001	Maize	nucleus	37.43	34.53
KRH49770	Soybean	nucleus	37.72	34.33
VIT_07s0197g00060.t01	Wine grape	nucleus	39.52	34.2
CDY44057	Canola	nucleus	32.63	33.96
PGSC0003DMT400026096	Potato	nucleus	36.83	33.7
CDY42715	Canola	nucleus	29.64	33.67
Bra017795.1-P	Field mustard	nucleus	29.64	33.67
Solyc02g090400.2.1	Tomato	nucleus	37.13	33.42
Zm00001d018698_P001	Maize	nucleus	36.53	33.06
CDY72117	Canola	nucleus	17.96	32.79
Bra040662.1-P	Field mustard	nucleus	31.74	32.52
KRH28514	Soybean	nucleus	33.23	32.46
CDY51048	Canola	nucleus	29.04	32.23
Bra018794.1-P	Field mustard	nucleus	29.04	32.12
Solyc01g108300.2.1	Tomato	nucleus	38.62	31.85
TraesCS2B01G277300.1	Wheat	nucleus	38.32	31.84
PGSC0003DMT400066352	Potato	nucleus	38.32	31.84
GSMUA_Achr6P09870_001	Banana	nucleus	32.34	31.76
OQU79454	Sorghum	nucleus	38.62	31.7
KRH71185	Soybean	nucleus	39.22	31.64
GSMUA_Achr10P...	Banana	nucleus	29.34	31.61
KRH50234	Soybean	nucleus	38.62	31.31
EER95793	Sorghum	nucleus	36.53	31.04
AT4G37180.2	Thale cress	nucleus	33.53	30.85
CDY71327	Canola	nucleus	30.84	30.84
KRH76947	Soybean	nucleus	33.53	30.52
TraesCS5D01G411800.1	Wheat	plastid	35.93	30.46
AT1G49560.1	Thale cress	nucleus	29.64	29.73
HORVU2Hr1G006350.1	Barley	plastid	11.68	29.1
HORVU2Hr1G062670.3	Barley	plastid	37.72	29.1
KRH04674	Soybean	nucleus	31.74	29.04
GSMUA_Achr1P23220_001	Banana	nucleus	22.75	28.68
GSMUA_Achr8P18270_001	Banana	nucleus	31.74	28.57
HORVU6Hr1G034270.1	Barley	plastid	11.38	28.36
Os03t0241001-00	Rice	plastid	11.98	27.78
GSMUA_Achr11P...	Banana	nucleus	30.54	27.64
CDX69206	Canola	nucleus	12.87	27.56
GSMUA_Achr6P05330_001	Banana	nucleus	34.73	27.49
GSMUA_Achr4P03680_001	Banana	nucleus	24.85	26.95
GSMUA_Achr4P13650_001	Banana	plastid	13.17	26.67
GSMUA_Achr10P...	Banana	nucleus	31.74	26.57
GSMUA_Achr3P21090_001	Banana	nucleus	29.64	26.54
CDY22459	Canola	nucleus	31.74	26.04
CDY29342	Canola	cytosol, mitochondrion, nucleus	14.67	24.26
HORVU5Hr1G097560.4	Barley	nucleus, plastid	31.44	23.03
HORVU4Hr1G032990.1	Barley	cytosol	1.8	9.52

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr9G09630_001	EnsemblPlants:GSMUA_Achr9P09630_001	EnsemblPlants:GSMUA_Achr9T09630_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0TYX2
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31003	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002956DE3	SEG:seg	:	:

Description

MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G09630_001]

Coordinates

chr9:-:6258766..6260841

Molecular Weight (calculated)

37227.4 Da

IEP (calculated)

8.153

GRAVY (calculated)

-0.596

Length

334 amino acids

Sequence
(BLAST)

001: MAGIGLELRL CASRTVGGFV KQAAAVVETT DRGVAKLEES VRSLEEERRK IDAFKRELPL CMLLLTDVIE GLKKELERCR GQKLANAFEE FIPIRRKCEE
101: EAGVKLEADY EDKKNWMSSA QLWGVNSSEN NDEDDKSITD ERNGRPDCDA GKESLNLESK NRSAGGAFVQ FKGISALAMK PKEEVLQQAP RKARRCWSPE
201: LHRRFVLALH QLGGVRVATP KQIRELMKVD GLTNDEVKSH MQKYRLHSRK LPNASASFSR PPMVLGGLWV PPENHTVSPQ QSDSQSGSRQ SSLRLAGCDG
301: TISAAAGDSC EEEGNLLSTM LHFPWNNKLC RFST

Best Arabidopsis Sequence Match ( AT2G03500.1 )
(BLAST)

001: MASSSELSLD CKPQSYSMLL KSFGDNFQSD PTTHKLEDLL SRLEQERLKI DAFKRELPLC MQLLNNAVEV YKQQLEAYRA NSNNNNQSVG TRPVLEEFIP
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF

Arabidopsis Description

EFMMyb family transcription factor EFM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ85]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.