Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P34680_001 | Banana | nucleus | 62.37 | 63.85 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 53.35 | 61.06 |
| GSMUA_Achr10P... | Banana | nucleus | 61.08 | 60.61 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 57.99 | 60.48 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 58.76 | 60.16 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 60.31 | 59.69 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 50.26 | 58.38 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 47.42 | 57.14 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 51.29 | 54.37 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 42.78 | 48.82 |
| Zm00001d034160_P001 | Maize | nucleus | 40.21 | 46.15 |
| KXG37487 | Sorghum | nucleus | 39.43 | 44.74 |
| TraesCS5D01G081000.1 | Wheat | nucleus | 42.27 | 43.73 |
| TraesCS2A01G264800.1 | Wheat | nucleus | 39.95 | 43.66 |
| TraesCS2D01G259200.2 | Wheat | nucleus | 39.95 | 43.54 |
| TraesCS5A01G401600.1 | Wheat | nucleus | 37.37 | 43.41 |
| TraesCS5A01G068900.2 | Wheat | nucleus | 42.27 | 43.39 |
| Os03t0764600-01 | Rice | nucleus | 38.66 | 43.1 |
| Os07t0119300-01 | Rice | nucleus | 39.43 | 43.1 |
| TraesCS5B01G075300.1 | Wheat | nucleus | 41.75 | 42.97 |
| TraesCS5B01G406300.2 | Wheat | nucleus | 36.86 | 42.81 |
| HORVU5Hr1G018220.2 | Barley | nucleus | 41.49 | 42.59 |
| Zm00001d007962_P001 | Maize | extracellular, nucleus | 37.37 | 42.03 |
| Os12t0586300-00 | Rice | extracellular | 42.78 | 42.03 |
| VIT_03s0063g01060.t01 | Wine grape | nucleus | 43.04 | 41.65 |
| Zm00001d013202_P001 | Maize | nucleus | 38.4 | 41.16 |
| KRH71185 | Soybean | nucleus | 43.3 | 40.58 |
| KRG89233 | Soybean | nucleus | 38.4 | 40.49 |
| HORVU2Hr1G006350.1 | Barley | plastid | 13.92 | 40.3 |
| KRH50234 | Soybean | nucleus | 42.01 | 39.56 |
| KRH49770 | Soybean | nucleus | 37.37 | 39.51 |
| PGSC0003DMT400026096 | Potato | nucleus | 37.11 | 39.45 |
| Zm00001d030891_P001 | Maize | nucleus | 37.11 | 39.34 |
| Zm00001d018698_P001 | Maize | nucleus | 37.37 | 39.3 |
| CDY40421 | Canola | nucleus | 16.49 | 39.26 |
| CDY51048 | Canola | nucleus | 30.41 | 39.2 |
| Bra018794.1-P | Field mustard | nucleus | 30.41 | 39.07 |
| TraesCS2B01G277300.1 | Wheat | nucleus | 40.46 | 39.05 |
| PGSC0003DMT400066352 | Potato | nucleus | 40.21 | 38.81 |
| HORVU6Hr1G034270.1 | Barley | plastid | 13.4 | 38.81 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 38.4 | 38.6 |
| KRH28514 | Soybean | nucleus | 34.02 | 38.6 |
| Solyc01g108300.2.1 | Tomato | nucleus | 40.21 | 38.52 |
| Os03t0241001-00 | Rice | plastid | 14.18 | 38.19 |
| EER95793 | Sorghum | nucleus | 38.4 | 37.91 |
| Solyc02g090400.2.1 | Tomato | nucleus | 36.08 | 37.74 |
| TraesCS5D01G411800.1 | Wheat | plastid | 37.89 | 37.31 |
| Bra010581.1-P | Field mustard | nucleus | 29.9 | 37.18 |
| Bra040662.1-P | Field mustard | nucleus | 31.19 | 37.12 |
| Bra017795.1-P | Field mustard | nucleus | 28.09 | 37.07 |
| CDY42715 | Canola | nucleus | 28.09 | 37.07 |
| CDY44057 | Canola | nucleus | 30.67 | 37.07 |
| CDX69259 | Canola | nucleus | 30.67 | 36.96 |
| OQU79454 | Sorghum | nucleus | 38.66 | 36.85 |
| CDY59732 | Canola | nucleus | 24.23 | 36.72 |
| CDX75610 | Canola | nucleus | 30.67 | 36.62 |
| Bra011720.1-P | Field mustard | nucleus | 30.41 | 36.31 |
| CDY72117 | Canola | nucleus | 17.01 | 36.07 |
| KRH76947 | Soybean | nucleus | 34.02 | 35.97 |
| CDY71327 | Canola | nucleus | 30.93 | 35.93 |
| HORVU2Hr1G062670.3 | Barley | plastid | 39.95 | 35.8 |
| AT1G49560.1 | Thale cress | nucleus | 30.15 | 35.14 |
| KRH04674 | Soybean | nucleus | 32.47 | 34.52 |
| GSMUA_Achr10P... | Banana | nucleus | 26.8 | 33.55 |
| GSMUA_Achr6P09870_001 | Banana | nucleus | 29.12 | 33.24 |
| GSMUA_Achr1P23220_001 | Banana | nucleus | 22.42 | 32.83 |
| AT4G37180.2 | Thale cress | nucleus | 30.67 | 32.78 |
| GSMUA_Achr4P13650_001 | Banana | plastid | 13.4 | 31.52 |
| CDX69206 | Canola | nucleus | 12.63 | 31.41 |
| GSMUA_Achr8P18270_001 | Banana | nucleus | 29.38 | 30.73 |
| GSMUA_Achr4P03680_001 | Banana | nucleus | 24.23 | 30.52 |
| GSMUA_Achr10P... | Banana | nucleus | 30.93 | 30.08 |
| GSMUA_Achr6P05330_001 | Banana | nucleus | 32.47 | 29.86 |
| GSMUA_Achr3P21090_001 | Banana | nucleus | 28.09 | 29.22 |
| GSMUA_Achr11P... | Banana | nucleus | 27.32 | 28.73 |
| CDY22459 | Canola | nucleus | 28.61 | 27.27 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 14.18 | 27.23 |
| HORVU4Hr1G032990.1 | Barley | cytosol | 4.38 | 26.98 |
| HORVU5Hr1G097560.4 | Barley | nucleus, plastid | 31.44 | 26.75 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr10G28540_001 | EnsemblPlants:GSMUA_Achr10P28540_001 | EnsemblPlants:GSMUA_Achr10T28540_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0RM78 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31003 | PANTHER:PTHR31003:SF7 |
| InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0002962F84 | SEG:seg | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G28540_001]
Coordinates
chr10:-:31334716..31336366
Molecular Weight (calculated)
42206.9 Da
IEP (calculated)
7.785
GRAVY (calculated)
-0.619
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSAAADVS LDLKLFTART VAGFLKEALV MEIGDGRVAK LEESVRSLEE EKRKIEAFKR ELPLCMHLLT DVIEGLEKEL EKCRGERCAR VFGESIPIKE
101: KFEEEGREKV EKDCEAKMNW MSSAQLWSDN PNRNNCKDNK NEKKVTPEGG GELKRQQKKE NLFLESKSLS GGGAFVPFKG LSAVTANGEE GKPTVALPDL
201: SLQAPAMDNG ALTLSAVTEG HFVSGSGSKG AGRAPTSAPA TAGDHPSSQA QQPPPRKVRR CWSPELHRRF LFALQKLGGA QVATPKQIRE LMKVDGLTND
301: EVKSHLQKYR LHARRMPNSS DAVNRRVAVA GGVWVPEEQY SNSSQQSVSQ SGSPQSPLQL AGATPVVSVT AGDSCEEEDG KSESFSWK
101: KFEEEGREKV EKDCEAKMNW MSSAQLWSDN PNRNNCKDNK NEKKVTPEGG GELKRQQKKE NLFLESKSLS GGGAFVPFKG LSAVTANGEE GKPTVALPDL
201: SLQAPAMDNG ALTLSAVTEG HFVSGSGSKG AGRAPTSAPA TAGDHPSSQA QQPPPRKVRR CWSPELHRRF LFALQKLGGA QVATPKQIRE LMKVDGLTND
301: EVKSHLQKYR LHARRMPNSS DAVNRRVAVA GGVWVPEEQY SNSSQQSVSQ SGSPQSPLQL AGATPVVSVT AGDSCEEEDG KSESFSWK
001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
Arabidopsis Description
HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.