Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P34680_001 | Banana | nucleus | 63.27 | 65.44 |
| GSMUA_Achr10P... | Banana | nucleus | 62.5 | 62.66 |
| GSMUA_Achr10P... | Banana | nucleus | 59.69 | 60.31 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 50.77 | 59.58 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 47.96 | 55.46 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 51.53 | 54.3 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 44.13 | 53.73 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 48.47 | 51.91 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 48.21 | 49.87 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 41.07 | 47.35 |
| Os03t0764600-01 | Rice | nucleus | 39.54 | 44.54 |
| Zm00001d034160_P001 | Maize | nucleus | 38.01 | 44.08 |
| TraesCS5A01G401600.1 | Wheat | nucleus | 37.5 | 44.01 |
| KXG37487 | Sorghum | nucleus | 38.27 | 43.86 |
| TraesCS5B01G406300.2 | Wheat | nucleus | 36.73 | 43.11 |
| CDY40421 | Canola | nucleus | 17.86 | 42.94 |
| TraesCS2A01G264800.1 | Wheat | nucleus | 38.52 | 42.54 |
| TraesCS2D01G259200.2 | Wheat | nucleus | 38.52 | 42.42 |
| Zm00001d007962_P001 | Maize | extracellular, nucleus | 37.24 | 42.32 |
| TraesCS5D01G081000.1 | Wheat | nucleus | 40.05 | 41.87 |
| Os07t0119300-01 | Rice | nucleus | 37.76 | 41.69 |
| HORVU5Hr1G018220.2 | Barley | nucleus | 40.05 | 41.53 |
| TraesCS5A01G068900.2 | Wheat | nucleus | 40.05 | 41.53 |
| TraesCS5B01G075300.1 | Wheat | nucleus | 39.8 | 41.38 |
| Os03t0241001-00 | Rice | plastid | 15.05 | 40.97 |
| Zm00001d018698_P001 | Maize | nucleus | 38.52 | 40.92 |
| VIT_03s0063g01060.t01 | Wine grape | nucleus | 41.58 | 40.65 |
| Os12t0586300-00 | Rice | extracellular | 40.31 | 40.0 |
| Zm00001d013202_P001 | Maize | nucleus | 36.73 | 39.78 |
| CDX69259 | Canola | nucleus | 32.65 | 39.75 |
| CDX75610 | Canola | nucleus | 32.91 | 39.69 |
| Zm00001d030891_P001 | Maize | nucleus | 36.99 | 39.62 |
| HORVU2Hr1G006350.1 | Barley | plastid | 13.52 | 39.55 |
| CDY72117 | Canola | nucleus | 18.37 | 39.34 |
| EER95793 | Sorghum | nucleus | 39.29 | 39.19 |
| PGSC0003DMT400026096 | Potato | nucleus | 36.22 | 38.9 |
| KRG89233 | Soybean | nucleus | 36.48 | 38.86 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 38.01 | 38.6 |
| Bra011720.1-P | Field mustard | nucleus | 31.89 | 38.46 |
| Bra010581.1-P | Field mustard | nucleus | 30.61 | 38.46 |
| Bra017795.1-P | Field mustard | nucleus | 28.83 | 38.44 |
| CDY42715 | Canola | nucleus | 28.83 | 38.44 |
| CDY44057 | Canola | nucleus | 31.38 | 38.32 |
| KRH49770 | Soybean | nucleus | 35.71 | 38.15 |
| TraesCS2B01G277300.1 | Wheat | nucleus | 39.03 | 38.06 |
| HORVU6Hr1G034270.1 | Barley | plastid | 13.01 | 38.06 |
| Solyc02g090400.2.1 | Tomato | nucleus | 35.71 | 37.74 |
| TraesCS5D01G411800.1 | Wheat | plastid | 37.5 | 37.31 |
| CDY51048 | Canola | nucleus | 28.57 | 37.21 |
| CDY59732 | Canola | nucleus | 24.23 | 37.11 |
| Bra018794.1-P | Field mustard | nucleus | 28.57 | 37.09 |
| KRH71185 | Soybean | nucleus | 38.78 | 36.72 |
| KRH50234 | Soybean | nucleus | 38.52 | 36.65 |
| OQU79454 | Sorghum | nucleus | 38.01 | 36.61 |
| PGSC0003DMT400066352 | Potato | nucleus | 37.24 | 36.32 |
| KRH04674 | Soybean | nucleus | 33.42 | 35.89 |
| Bra040662.1-P | Field mustard | nucleus | 29.85 | 35.89 |
| Solyc01g108300.2.1 | Tomato | nucleus | 36.99 | 35.8 |
| AT1G49560.1 | Thale cress | nucleus | 30.1 | 35.44 |
| KRH28514 | Soybean | nucleus | 30.87 | 35.38 |
| AT4G37180.2 | Thale cress | nucleus | 32.65 | 35.26 |
| HORVU2Hr1G062670.3 | Barley | plastid | 38.27 | 34.64 |
| CDY71327 | Canola | nucleus | 29.08 | 34.13 |
| CDX69206 | Canola | nucleus | 13.27 | 33.33 |
| GSMUA_Achr6P09870_001 | Banana | nucleus | 28.83 | 33.24 |
| KRH76947 | Soybean | nucleus | 30.61 | 32.7 |
| GSMUA_Achr1P23220_001 | Banana | nucleus | 21.94 | 32.45 |
| GSMUA_Achr10P... | Banana | nucleus | 25.26 | 31.94 |
| GSMUA_Achr4P03680_001 | Banana | nucleus | 23.98 | 30.52 |
| GSMUA_Achr10P... | Banana | nucleus | 30.61 | 30.08 |
| GSMUA_Achr3P21090_001 | Banana | nucleus | 28.57 | 30.03 |
| GSMUA_Achr8P18270_001 | Banana | nucleus | 28.32 | 29.92 |
| GSMUA_Achr6P05330_001 | Banana | nucleus | 32.14 | 29.86 |
| GSMUA_Achr4P13650_001 | Banana | plastid | 12.24 | 29.09 |
| GSMUA_Achr11P... | Banana | nucleus | 27.04 | 28.73 |
| CDY22459 | Canola | nucleus | 29.59 | 28.5 |
| HORVU5Hr1G097560.4 | Barley | nucleus, plastid | 32.4 | 27.85 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 13.27 | 25.74 |
| HORVU4Hr1G032990.1 | Barley | cytosol | 4.08 | 25.4 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr9G26570_001 | EnsemblPlants:GSMUA_Achr9P26570_001 | EnsemblPlants:GSMUA_Achr9T26570_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0U3R4 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31003 | PANTHER:PTHR31003:SF2 |
| InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000294B403 | SEG:seg | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G26570_001]
Coordinates
chr9:+:30957122..30959742
Molecular Weight (calculated)
43149.0 Da
IEP (calculated)
6.937
GRAVY (calculated)
-0.680
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAVADVVL DLNLCAVRAV GGSLKEAAAL ESGDGRVAKL EEYVRSLEEE RRKIEAFKRE LPLCMILLTD LIEGLKQELK QCRDGRPTHV FEEVIPVKRK
101: REDEGGLKPE ADCKDKMSWM SSAQLWSVNS REDKSDGDRN VTEERSGSRD QREEKEKEDN LFLESTSRNG RGAFVPFKGI SGPKIKSKEE TKTTVMLPDL
201: SLLSPAGNSA SSPVSATVED HPVGGSGSKG VGRAPVSAPT ISGAHLSLQV QQQQQQQQLP RKARRCWSSE LHRRFVLALE QLGGPQVATP KQIRDLMKVD
301: GLTNDEVKSH LQKYRLHTRK MPNATSAISQ PVMVVRGLCV PDENYTTLPR SASHSGSPES PLQLANSNHE ISANAGDSCE EVDEKSENYN LR
101: REDEGGLKPE ADCKDKMSWM SSAQLWSVNS REDKSDGDRN VTEERSGSRD QREEKEKEDN LFLESTSRNG RGAFVPFKGI SGPKIKSKEE TKTTVMLPDL
201: SLLSPAGNSA SSPVSATVED HPVGGSGSKG VGRAPVSAPT ISGAHLSLQV QQQQQQQQLP RKARRCWSSE LHRRFVLALE QLGGPQVATP KQIRDLMKVD
301: GLTNDEVKSH LQKYRLHTRK MPNATSAISQ PVMVVRGLCV PDENYTTLPR SASHSGSPES PLQLANSNHE ISANAGDSCE EVDEKSENYN LR
001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
Arabidopsis Description
HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.