Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034160_P001 | Maize | nucleus | 75.41 | 80.77 |
| TraesCS5B01G406300.2 | Wheat | nucleus | 56.08 | 60.78 |
| TraesCS5A01G401600.1 | Wheat | nucleus | 56.08 | 60.78 |
| Os03t0764600-01 | Rice | nucleus | 56.08 | 58.33 |
| TraesCS5D01G411800.1 | Wheat | plastid | 55.8 | 51.27 |
| Zm00001d007962_P001 | Maize | extracellular, nucleus | 47.79 | 50.14 |
| Zm00001d018698_P001 | Maize | nucleus | 48.34 | 47.43 |
| GSMUA_Achr6P34680_001 | Banana | nucleus | 40.88 | 39.05 |
| GSMUA_Achr10P... | Banana | nucleus | 41.16 | 38.4 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 35.64 | 38.05 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 38.12 | 37.7 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 34.53 | 37.43 |
| HORVU5Hr1G097560.4 | Barley | nucleus, plastid | 46.96 | 37.28 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 38.12 | 37.1 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 34.53 | 36.76 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 39.78 | 36.73 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 32.32 | 36.34 |
| CDY51048 | Canola | nucleus | 30.11 | 36.21 |
| Bra018794.1-P | Field mustard | nucleus | 30.11 | 36.09 |
| Zm00001d030891_P001 | Maize | nucleus | 36.46 | 36.07 |
| CDY59732 | Canola | nucleus | 25.41 | 35.94 |
| GSMUA_Achr10P... | Banana | nucleus | 38.12 | 35.29 |
| CDX69259 | Canola | nucleus | 30.94 | 34.78 |
| VIT_03s0063g01060.t01 | Wine grape | nucleus | 38.4 | 34.66 |
| CDX75610 | Canola | nucleus | 30.94 | 34.46 |
| CDY40421 | Canola | nucleus | 15.47 | 34.36 |
| KRG89233 | Soybean | nucleus | 34.81 | 34.24 |
| Bra011720.1-P | Field mustard | nucleus | 30.66 | 34.15 |
| Bra040662.1-P | Field mustard | nucleus | 30.66 | 34.05 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 35.64 | 34.04 |
| KRH28514 | Soybean | nucleus | 32.04 | 33.92 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 35.91 | 33.68 |
| CDY42715 | Canola | nucleus | 27.35 | 33.67 |
| Bra017795.1-P | Field mustard | nucleus | 27.35 | 33.67 |
| CDY44057 | Canola | nucleus | 29.56 | 33.33 |
| Bra010581.1-P | Field mustard | nucleus | 28.73 | 33.33 |
| KRH49770 | Soybean | nucleus | 33.7 | 33.24 |
| Solyc01g108300.2.1 | Tomato | nucleus | 37.02 | 33.09 |
| PGSC0003DMT400066352 | Potato | nucleus | 36.74 | 33.08 |
| CDY71327 | Canola | nucleus | 30.39 | 32.93 |
| AT1G49560.1 | Thale cress | nucleus | 30.11 | 32.73 |
| KRH76947 | Soybean | nucleus | 32.32 | 31.88 |
| KRH50234 | Soybean | nucleus | 36.19 | 31.8 |
| PGSC0003DMT400026096 | Potato | nucleus | 32.04 | 31.78 |
| CDY72117 | Canola | nucleus | 16.02 | 31.69 |
| KRH71185 | Soybean | nucleus | 35.91 | 31.4 |
| Solyc02g090400.2.1 | Tomato | nucleus | 31.77 | 31.0 |
| KRH04674 | Soybean | nucleus | 30.39 | 30.14 |
| AT4G37180.2 | Thale cress | nucleus | 29.83 | 29.75 |
| CDX69206 | Canola | nucleus | 11.88 | 27.56 |
| CDY22459 | Canola | nucleus | 27.9 | 24.82 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 12.15 | 21.78 |
| Zm00001d023411_P001 | Maize | nucleus | 26.52 | 21.19 |
| Zm00001d023402_P001 | Maize | nucleus | 26.8 | 21.13 |
| Zm00001d039637_P001 | Maize | nucleus | 29.83 | 20.15 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100280246 | MapMan:15.5.2.3 | ProteinID:AQK62654.1 | UniProt:B6UB84 | EMBL:EU974499 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31003 | PANTHER:PTHR31003:SF6 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000182F15B | EnsemblPlantsGene:Zm00001d013202 | EnsemblPlants:Zm00001d013202_P001 | EnsemblPlants:Zm00001d013202_T001 |
| SEG:seg | : | : | : | : | : |
Description
G2-like-transcription factor 8DNA binding protein
Coordinates
chr5:-:6405099..6407194
Molecular Weight (calculated)
38389.1 Da
IEP (calculated)
5.157
GRAVY (calculated)
-0.461
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLDVGEIGM GLDLGLDLRL FAARSAGGMA KGAAPAGIQS CIRSLEVERR KIEVFRRELP LCLRLLADVI DELKEEAAKR GEYDDGAATV DDGDKRKWMS
101: TAQLWVDSDA KSDESDKEQQ SEITSPPEPK LLGGGAPTPI RAAVSAVAVP QPLPPPLFRR EDSSASSGLS LVSLSPATKA AVPISPPVVA ASGTGTASAR
201: FCGTTMPPCG SEVNNMHSQA QQQQQASRKA RRCWSPELHR RFVAALHELG GPQVATPKQI REVMQVDGLT NDEVKSHLQK YRLHNRRSSP GAAAAPVSQS
301: IMLVDGVWAA QEQSSGSQSG SRQGPLQFSR AGMAVGGGDD SSSSDDDEDD DKSEDGYSLK CV
101: TAQLWVDSDA KSDESDKEQQ SEITSPPEPK LLGGGAPTPI RAAVSAVAVP QPLPPPLFRR EDSSASSGLS LVSLSPATKA AVPISPPVVA ASGTGTASAR
201: FCGTTMPPCG SEVNNMHSQA QQQQQASRKA RRCWSPELHR RFVAALHELG GPQVATPKQI REVMQVDGLT NDEVKSHLQK YRLHNRRSSP GAAAAPVSQS
301: IMLVDGVWAA QEQSSGSQSG SRQGPLQFSR AGMAVGGGDD SSSSDDDEDD DKSEDGYSLK CV
001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
Arabidopsis Description
HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.