Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28514 | Soybean | nucleus | 85.01 | 91.23 |
| KRH04674 | Soybean | nucleus | 50.95 | 51.23 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 46.59 | 44.3 |
| Solyc02g090400.2.1 | Tomato | nucleus | 41.69 | 41.24 |
| PGSC0003DMT400026096 | Potato | nucleus | 40.6 | 40.82 |
| CDY42715 | Canola | nucleus | 31.06 | 38.78 |
| Bra017795.1-P | Field mustard | nucleus | 30.79 | 38.44 |
| Bra010581.1-P | Field mustard | nucleus | 32.43 | 38.14 |
| CDY44057 | Canola | nucleus | 32.97 | 37.69 |
| KRG89233 | Soybean | nucleus | 37.6 | 37.5 |
| CDX69259 | Canola | nucleus | 32.43 | 36.96 |
| CDY40421 | Canola | nucleus | 16.35 | 36.81 |
| KRH71185 | Soybean | nucleus | 41.42 | 36.72 |
| CDX75610 | Canola | nucleus | 32.43 | 36.62 |
| KRH49770 | Soybean | nucleus | 36.51 | 36.51 |
| KRH50234 | Soybean | nucleus | 40.87 | 36.41 |
| Bra011720.1-P | Field mustard | nucleus | 32.15 | 36.31 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 33.52 | 36.28 |
| Zm00001d007962_P001 | Maize | extracellular, nucleus | 32.97 | 35.07 |
| CDY72117 | Canola | nucleus | 17.44 | 34.97 |
| GSMUA_Achr10P... | Banana | nucleus | 35.97 | 34.02 |
| GSMUA_Achr10P... | Banana | nucleus | 36.24 | 34.02 |
| TraesCS5A01G401600.1 | Wheat | nucleus | 30.79 | 33.83 |
| Os07t0119300-01 | Rice | nucleus | 32.7 | 33.8 |
| KXG37487 | Sorghum | nucleus | 31.34 | 33.63 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 30.52 | 33.53 |
| Zm00001d034160_P001 | Maize | nucleus | 30.79 | 33.43 |
| Os03t0764600-01 | Rice | nucleus | 31.61 | 33.33 |
| TraesCS2A01G264800.1 | Wheat | nucleus | 32.15 | 33.24 |
| Zm00001d018698_P001 | Maize | nucleus | 33.24 | 33.06 |
| AT4G37180.2 | Thale cress | nucleus | 32.7 | 33.06 |
| TraesCS2D01G259200.2 | Wheat | nucleus | 31.88 | 32.87 |
| Os03t0241001-00 | Rice | plastid | 12.81 | 32.64 |
| TraesCS5B01G406300.2 | Wheat | nucleus | 29.7 | 32.63 |
| GSMUA_Achr6P34680_001 | Banana | nucleus | 33.52 | 32.45 |
| Zm00001d013202_P001 | Maize | nucleus | 31.88 | 32.32 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 28.34 | 32.3 |
| HORVU6Hr1G034270.1 | Barley | plastid | 11.72 | 32.09 |
| HORVU2Hr1G006350.1 | Barley | plastid | 11.72 | 32.09 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 32.43 | 31.99 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 31.88 | 31.97 |
| HORVU5Hr1G018220.2 | Barley | nucleus | 32.7 | 31.75 |
| EER95793 | Sorghum | nucleus | 33.79 | 31.55 |
| TraesCS5D01G081000.1 | Wheat | nucleus | 31.88 | 31.2 |
| TraesCS5B01G075300.1 | Wheat | nucleus | 31.88 | 31.03 |
| TraesCS5A01G068900.2 | Wheat | nucleus | 31.61 | 30.69 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 32.7 | 30.61 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 31.61 | 30.61 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 27.52 | 29.71 |
| Zm00001d030891_P001 | Maize | nucleus | 29.43 | 29.51 |
| TraesCS2B01G277300.1 | Wheat | nucleus | 32.15 | 29.35 |
| CDY22459 | Canola | nucleus | 32.43 | 29.24 |
| Os12t0586300-00 | Rice | extracellular | 31.34 | 29.11 |
| CDX69206 | Canola | nucleus | 12.26 | 28.85 |
| TraesCS5D01G411800.1 | Wheat | plastid | 30.79 | 28.68 |
| OQU79454 | Sorghum | nucleus | 30.79 | 27.76 |
| HORVU2Hr1G062670.3 | Barley | plastid | 31.61 | 26.79 |
| KRH70595 | Soybean | nucleus | 26.43 | 26.15 |
| KRH75476 | Soybean | nucleus | 26.43 | 25.59 |
| KRG92028 | Soybean | nucleus | 26.43 | 25.46 |
| KRH34759 | Soybean | nucleus | 26.16 | 25.07 |
| KRH54846 | Soybean | nucleus | 31.61 | 24.84 |
| KRH63037 | Soybean | nucleus | 31.06 | 24.68 |
| KRH56661 | Soybean | nucleus | 30.52 | 24.67 |
| KRH03776 | Soybean | nucleus | 29.7 | 24.11 |
| HORVU5Hr1G097560.4 | Barley | nucleus, plastid | 26.16 | 21.05 |
| HORVU4Hr1G032990.1 | Barley | cytosol | 2.45 | 14.29 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100785723 | MapMan:15.5.2.3 | EMBL:ACUP02000649 | EnsemblPlantsGene:GLYMA_01G183700 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | UniProt:I1J945 | InterPro:IPR017930 | EnsemblPlants:KRH76947 |
| ProteinID:KRH76947 | ProteinID:KRH76947.1 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR31003 | PANTHER:PTHR31003:SF2 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0002953439 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:51902417..51904684
Molecular Weight (calculated)
40624.8 Da
IEP (calculated)
7.478
GRAVY (calculated)
-0.753
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVCDFWELS LAQSQRKTPK SNIIMEPSLD LRLGFVPKPL SLFFGDVSGN RDKCDKVVTL DGFVQRLEEE LTKVEAFKRE LPLCILLLND AIARLKEEKV
101: KCSGMQDPPL KTSSGGNENE NSEKKNWMSS AQLWSTQKSK SRNEEDDRSV PANSINGNSC VPEKEGSQVP SFGLMARASE LSHSNSKSVG GDTSSGSSLL
201: RVEVQSQPQP PQHMQQNPRK QRRCWSPELH RRFVDALQQL GGAQVATPKQ IRELMQVEGL TNDEVKSHLQ KYRLHVRRFP VFSIGQVDNG SWMTQDECGD
301: KSKGNMSQSG SPQGPLTPLL LGGAGSAKGL SSPGRNSVDA EDEQSSDCRN WKGGLHHQQL ETDNHSL
101: KCSGMQDPPL KTSSGGNENE NSEKKNWMSS AQLWSTQKSK SRNEEDDRSV PANSINGNSC VPEKEGSQVP SFGLMARASE LSHSNSKSVG GDTSSGSSLL
201: RVEVQSQPQP PQHMQQNPRK QRRCWSPELH RRFVDALQQL GGAQVATPKQ IRELMQVEGL TNDEVKSHLQ KYRLHVRRFP VFSIGQVDNG SWMTQDECGD
301: KSKGNMSQSG SPQGPLTPLL LGGAGSAKGL SSPGRNSVDA EDEQSSDCRN WKGGLHHQQL ETDNHSL
001: MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
101: ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS
201: SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD
301: SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ VLDLEL
Arabidopsis Description
HHO5Transcription factor HHO5 [Source:UniProtKB/Swiss-Prot;Acc:F4JRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.