Factsheet for HORVU2Hr1G062670.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G264800.1	Wheat	nucleus	79.21	96.62
TraesCS2D01G259200.2	Wheat	nucleus	78.98	96.07
TraesCS2B01G277300.1	Wheat	nucleus	86.84	93.53
Zm00001d007962_P001	Maize	extracellular, nucleus	57.97	72.75
Os07t0119300-01	Rice	nucleus	58.43	71.27
Zm00001d018698_P001	Maize	nucleus	58.43	68.56
EER95793	Sorghum	nucleus	61.89	68.19
GSMUA_Achr7P00660_001	Banana	nucleus	31.64	40.41
GSMUA_Achr10P...	Banana	nucleus	36.49	40.41
GSMUA_Achr10P...	Banana	nucleus	35.8	39.95
GSMUA_Achr6P34680_001	Banana	nucleus	34.87	39.84
GSMUA_Achr9P26570_001	Banana	nucleus	34.64	38.27
GSMUA_Achr4P32500_001	Banana	nucleus	30.02	38.24
GSMUA_Achr4P23210_001	Banana	nucleus	32.79	38.17
GSMUA_Achr4P28210_001	Banana	nucleus	28.18	37.89
GSMUA_Achr9P09630_001	Banana	mitochondrion, nucleus	29.1	37.72
HORVU5Hr1G018220.2	Barley	nucleus	32.56	37.3
GSMUA_Achr2P13380_001	Banana	nucleus	31.18	36.89
GSMUA_Achr6P00650_001	Banana	nucleus	32.1	36.68
VIT_03s0063g01060.t01	Wine grape	nucleus	32.79	35.41
Bra018794.1-P	Field mustard	nucleus	24.48	35.1
HORVU5Hr1G097560.4	Barley	nucleus, plastid	36.95	35.09
HORVU2Hr1G006350.1	Barley	plastid	10.85	35.07
KRH71185	Soybean	nucleus	33.49	35.02
CDY51048	Canola	nucleus	24.25	34.88
KRH28514	Soybean	nucleus	27.25	34.5
KRH50234	Soybean	nucleus	32.79	34.47
CDY59732	Canola	nucleus	20.32	34.38
CDY40421	Canola	nucleus	12.93	34.36
HORVU6Hr1G034270.1	Barley	plastid	10.62	34.33
KRG89233	Soybean	nucleus	29.1	34.24
PGSC0003DMT400066352	Potato	nucleus	31.41	33.83
Solyc01g108300.2.1	Tomato	nucleus	31.64	33.83
KRH49770	Soybean	nucleus	28.41	33.52
VIT_07s0197g00060.t01	Wine grape	nucleus	29.79	33.42
Solyc02g090400.2.1	Tomato	nucleus	28.18	32.88
Bra040662.1-P	Field mustard	nucleus	24.71	32.82
CDY72117	Canola	nucleus	13.86	32.79
CDX75610	Canola	nucleus	24.48	32.62
PGSC0003DMT400026096	Potato	nucleus	27.48	32.6
Bra010581.1-P	Field mustard	nucleus	23.09	32.05
CDY71327	Canola	nucleus	24.71	32.04
CDX69259	Canola	nucleus	23.79	31.99
CDY42715	Canola	nucleus	21.71	31.97
Bra017795.1-P	Field mustard	nucleus	21.71	31.97
KRH76947	Soybean	nucleus	26.79	31.61
AT1G49560.1	Thale cress	nucleus	24.25	31.53
CDY44057	Canola	nucleus	23.33	31.46
Bra011720.1-P	Field mustard	nucleus	23.56	31.38
KRH04674	Soybean	nucleus	26.1	30.96
CDX69206	Canola	nucleus	10.62	29.49
AT4G37180.2	Thale cress	nucleus	23.56	28.1
HORVU4Hr1G032990.1	Barley	cytosol	3.46	23.81
CDY22459	Canola	nucleus	21.94	23.34
HORVU3Hr1G022960.5	Barley	nucleus	27.02	22.46
CDY29342	Canola	cytosol, mitochondrion, nucleus	9.7	20.79
HORVU2Hr1G020140.3	Barley	nucleus, plastid	23.09	19.34

Protein Annotations

MapMan:35.1	UniProt:A0A287I6F3	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU2Hr1G062670	EnsemblPlants:HORVU2Hr1G062670.3	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	PANTHER:PTHR31003	PANTHER:PTHR31003:SF15
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000B461188	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:421939824..421941828

Molecular Weight (calculated)

46708.4 Da

IEP (calculated)

9.803

GRAVY (calculated)

-0.555

Length

433 amino acids

Sequence
(BLAST)

001: SSIYINVPIH PPPPSSSHPP HTFSCNKSVK IPFGAPVRCK PNPMGLDVGE IGMGADLSLD LKMFAAKSLG RAREAPAAAM DDCIRRLEEE KSKIEVFRRE
101: LPLCARLLAD VIDVMKKEVE EKKRGGDRGE NKEDAGAGDK SNWMSTAQLW TGDSVRGDDA SEKQDERRRS SEPESHDGAV LPFKAVGSGA PAFAPPSLRK
201: DDKAVRMPDL PFLSPAPIKT SLAAATGGAE ESRRQLVGFA QEAARAAAAL APAAPSMSLQ AQSQQTAQQQ QQARKARRCR SPELHRQFVT ALHQLGGPQG
301: ESFTKKSQKF PSISRYNTSK LLSAYMVVFL GTIAVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHNRRAP GSPVANRPIV LMGGLWITQE QSSSQSGGSP
401: PGPLHLSSSG VAASSVTVSG EEEDGRSESY GWK

Best Arabidopsis Sequence Match ( AT2G03500.1 )
(BLAST)

001: MASSSELSLD CKPQSYSMLL KSFGDNFQSD PTTHKLEDLL SRLEQERLKI DAFKRELPLC MQLLNNAVEV YKQQLEAYRA NSNNNNQSVG TRPVLEEFIP
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF

Arabidopsis Description

EFMMyb family transcription factor EFM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ85]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.