Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018698_P001 | Maize | nucleus | 80.15 | 85.37 |
| TraesCS2A01G264800.1 | Wheat | nucleus | 67.18 | 74.37 |
| TraesCS2D01G259200.2 | Wheat | nucleus | 66.67 | 73.6 |
| Os07t0119300-01 | Rice | nucleus | 63.87 | 70.7 |
| TraesCS2B01G277300.1 | Wheat | nucleus | 68.19 | 66.67 |
| HORVU2Hr1G062670.3 | Barley | plastid | 68.19 | 61.89 |
| KXG37487 | Sorghum | nucleus | 47.58 | 54.68 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 39.19 | 39.29 |
| GSMUA_Achr10P... | Banana | nucleus | 37.91 | 38.4 |
| GSMUA_Achr10P... | Banana | nucleus | 37.91 | 38.11 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 32.82 | 38.05 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 35.62 | 37.63 |
| GSMUA_Achr6P34680_001 | Banana | nucleus | 36.13 | 37.47 |
| VIT_03s0063g01060.t01 | Wine grape | nucleus | 38.17 | 37.41 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 32.06 | 37.06 |
| GSMUA_Achr4P28210_001 | Banana | nucleus | 30.28 | 36.96 |
| GSMUA_Achr2P13380_001 | Banana | nucleus | 34.35 | 36.89 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 31.04 | 36.53 |
| KRH28514 | Soybean | nucleus | 31.3 | 35.96 |
| KRG89233 | Soybean | nucleus | 33.33 | 35.6 |
| CDY51048 | Canola | nucleus | 26.97 | 35.22 |
| OQU79454 | Sorghum | nucleus | 36.39 | 35.14 |
| Bra018794.1-P | Field mustard | nucleus | 26.97 | 35.1 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 33.84 | 35.09 |
| CDY40421 | Canola | nucleus | 14.5 | 34.97 |
| KRH49770 | Soybean | nucleus | 32.32 | 34.6 |
| KRH50234 | Soybean | nucleus | 36.13 | 34.47 |
| CDY59732 | Canola | nucleus | 22.39 | 34.38 |
| Bra017795.1-P | Field mustard | nucleus | 25.7 | 34.35 |
| CDY42715 | Canola | nucleus | 25.7 | 34.35 |
| KRH71185 | Soybean | nucleus | 36.13 | 34.3 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 33.59 | 34.2 |
| PGSC0003DMT400066352 | Potato | nucleus | 34.86 | 34.08 |
| CDY72117 | Canola | nucleus | 15.78 | 33.88 |
| CDX69259 | Canola | nucleus | 27.74 | 33.85 |
| Solyc01g108300.2.1 | Tomato | nucleus | 34.86 | 33.83 |
| KRH76947 | Soybean | nucleus | 31.55 | 33.79 |
| Bra010581.1-P | Field mustard | nucleus | 26.72 | 33.65 |
| CDY44057 | Canola | nucleus | 27.48 | 33.64 |
| CDX75610 | Canola | nucleus | 27.74 | 33.54 |
| CDY71327 | Canola | nucleus | 28.5 | 33.53 |
| PGSC0003DMT400026096 | Potato | nucleus | 31.04 | 33.42 |
| Solyc02g090400.2.1 | Tomato | nucleus | 31.3 | 33.15 |
| Bra011720.1-P | Field mustard | nucleus | 27.23 | 32.92 |
| Bra040662.1-P | Field mustard | nucleus | 26.97 | 32.52 |
| AT1G49560.1 | Thale cress | nucleus | 26.97 | 31.83 |
| KRH04674 | Soybean | nucleus | 29.01 | 31.23 |
| AT4G37180.2 | Thale cress | nucleus | 27.74 | 30.03 |
| CDX69206 | Canola | nucleus | 11.7 | 29.49 |
| CDY22459 | Canola | nucleus | 25.45 | 24.57 |
| EES02372 | Sorghum | nucleus | 30.28 | 23.71 |
| EES15678 | Sorghum | nucleus | 27.48 | 23.38 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 10.69 | 20.79 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | UniProt:C5X809 | ncoils:Coil | EnsemblPlants:EER95793 | ProteinID:EER95793 |
| ProteinID:EER95793.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31003 | PANTHER:PTHR31003:SF15 |
| InterPro:SANT/Myb | EnsemblPlantsGene:SORBI_3002G016300 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00081AC9A5 | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:+:1473639..1475820
Molecular Weight (calculated)
42293.0 Da
IEP (calculated)
7.171
GRAVY (calculated)
-0.504
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MELTFHDLPP FPSAARALLP SGTQDTTVDR FIATMGLDVV EIGMGADLSL DLRHFATKAV RQSKDDAPAP DMDACIRRLE EERGKIEMFK RELPLCARLL
101: ADVIDVMKEE AGKKTTKRSD RSLPAAEEDE DGAAGDKSKW MSTAQLWTGD SGREDAESEK QDKGRSLPEA KSRGGALLPF KAAVGSGAPA FASLCLRTDD
201: KAARVGMPDL SLLSPPATKS AAEESRRQVV GLAQAAARAA AMAPAAPALG LQSQSQQQTA QQQQQQARKV RRCWSTELHR QFVAALNQLG GPQVATPKQI
301: RELMKVDGLT NDEVKSHLQK YRLHNRRAPG SGVVSQPIML VGGLWIPQEQ SSSQSGSPHG PLHFSTASGI AVSSAATVSC EEEDGRSESY GWK
101: ADVIDVMKEE AGKKTTKRSD RSLPAAEEDE DGAAGDKSKW MSTAQLWTGD SGREDAESEK QDKGRSLPEA KSRGGALLPF KAAVGSGAPA FASLCLRTDD
201: KAARVGMPDL SLLSPPATKS AAEESRRQVV GLAQAAARAA AMAPAAPALG LQSQSQQQTA QQQQQQARKV RRCWSTELHR QFVAALNQLG GPQVATPKQI
301: RELMKVDGLT NDEVKSHLQK YRLHNRRAPG SGVVSQPIML VGGLWIPQEQ SSSQSGSPHG PLHFSTASGI AVSSAATVSC EEEDGRSESY GWK
001: MASSSELSLD CKPQSYSMLL KSFGDNFQSD PTTHKLEDLL SRLEQERLKI DAFKRELPLC MQLLNNAVEV YKQQLEAYRA NSNNNNQSVG TRPVLEEFIP
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF
Arabidopsis Description
EFMMyb family transcription factor EFM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ85]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.