Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P28210_001 | Banana | nucleus | 60.11 | 68.32 |
| GSMUA_Achr7P00660_001 | Banana | nucleus | 56.83 | 61.36 |
| GSMUA_Achr4P23210_001 | Banana | nucleus | 59.02 | 58.06 |
| GSMUA_Achr6P34680_001 | Banana | nucleus | 54.37 | 52.51 |
| GSMUA_Achr10P... | Banana | nucleus | 54.37 | 51.29 |
| GSMUA_Achr10P... | Banana | nucleus | 53.28 | 49.87 |
| GSMUA_Achr9P09630_001 | Banana | mitochondrion, nucleus | 45.08 | 49.4 |
| GSMUA_Achr9P26570_001 | Banana | nucleus | 51.91 | 48.47 |
| GSMUA_Achr4P32500_001 | Banana | nucleus | 43.44 | 46.76 |
| GSMUA_Achr6P00650_001 | Banana | nucleus | 45.63 | 44.06 |
| Zm00001d034160_P001 | Maize | nucleus | 37.98 | 41.12 |
| KXG37487 | Sorghum | nucleus | 37.43 | 40.06 |
| Os03t0764600-01 | Rice | nucleus | 37.16 | 39.08 |
| TraesCS5D01G081000.1 | Wheat | nucleus | 39.62 | 38.67 |
| TraesCS5A01G401600.1 | Wheat | nucleus | 35.25 | 38.62 |
| TraesCS5B01G406300.2 | Wheat | nucleus | 34.97 | 38.32 |
| TraesCS2D01G259200.2 | Wheat | nucleus | 37.16 | 38.2 |
| Zm00001d013202_P001 | Maize | nucleus | 37.7 | 38.12 |
| TraesCS2A01G264800.1 | Wheat | nucleus | 36.89 | 38.03 |
| TraesCS5B01G075300.1 | Wheat | nucleus | 39.07 | 37.93 |
| HORVU5Hr1G018220.2 | Barley | nucleus | 39.07 | 37.83 |
| VIT_03s0063g01060.t01 | Wine grape | nucleus | 41.26 | 37.66 |
| TraesCS5A01G068900.2 | Wheat | nucleus | 38.8 | 37.57 |
| HORVU2Hr1G006350.1 | Barley | plastid | 13.66 | 37.31 |
| Os12t0586300-00 | Rice | extracellular | 40.16 | 37.22 |
| Os07t0119300-01 | Rice | nucleus | 36.07 | 37.18 |
| Zm00001d007962_P001 | Maize | extracellular, nucleus | 34.97 | 37.1 |
| CDY40421 | Canola | nucleus | 16.39 | 36.81 |
| Zm00001d030891_P001 | Maize | nucleus | 36.34 | 36.34 |
| VIT_07s0197g00060.t01 | Wine grape | nucleus | 38.25 | 36.27 |
| PGSC0003DMT400026096 | Potato | nucleus | 35.79 | 35.89 |
| HORVU6Hr1G034270.1 | Barley | plastid | 13.11 | 35.82 |
| Zm00001d018698_P001 | Maize | nucleus | 36.07 | 35.77 |
| CDY51048 | Canola | nucleus | 29.23 | 35.55 |
| Bra018794.1-P | Field mustard | nucleus | 29.23 | 35.43 |
| Os03t0241001-00 | Rice | plastid | 13.93 | 35.42 |
| KRH28514 | Soybean | nucleus | 32.51 | 34.8 |
| Solyc02g090400.2.1 | Tomato | nucleus | 35.25 | 34.77 |
| CDY59732 | Canola | nucleus | 24.32 | 34.77 |
| EER95793 | Sorghum | nucleus | 36.89 | 34.35 |
| TraesCS2B01G277300.1 | Wheat | nucleus | 37.7 | 34.33 |
| Bra040662.1-P | Field mustard | nucleus | 30.05 | 33.74 |
| TraesCS5D01G411800.1 | Wheat | plastid | 36.07 | 33.5 |
| CDY71327 | Canola | nucleus | 30.33 | 33.23 |
| CDX69259 | Canola | nucleus | 29.23 | 33.23 |
| OQU79454 | Sorghum | nucleus | 36.89 | 33.17 |
| KRH04674 | Soybean | nucleus | 33.06 | 33.15 |
| AT1G49560.1 | Thale cress | nucleus | 30.05 | 33.03 |
| Bra011720.1-P | Field mustard | nucleus | 29.23 | 32.92 |
| CDX75610 | Canola | nucleus | 29.23 | 32.92 |
| KRG89233 | Soybean | nucleus | 33.06 | 32.88 |
| CDY44057 | Canola | nucleus | 28.69 | 32.71 |
| Bra010581.1-P | Field mustard | nucleus | 27.87 | 32.69 |
| PGSC0003DMT400066352 | Potato | nucleus | 35.79 | 32.59 |
| Solyc01g108300.2.1 | Tomato | nucleus | 35.79 | 32.35 |
| Bra017795.1-P | Field mustard | nucleus | 25.96 | 32.31 |
| KRH50234 | Soybean | nucleus | 36.34 | 32.28 |
| CDY72117 | Canola | nucleus | 16.12 | 32.24 |
| KRH49770 | Soybean | nucleus | 32.24 | 32.15 |
| KRH71185 | Soybean | nucleus | 36.34 | 32.13 |
| CDY42715 | Canola | nucleus | 25.68 | 31.97 |
| KRH76947 | Soybean | nucleus | 31.97 | 31.88 |
| GSMUA_Achr10P... | Banana | nucleus | 26.78 | 31.61 |
| HORVU2Hr1G062670.3 | Barley | plastid | 36.89 | 31.18 |
| GSMUA_Achr1P23220_001 | Banana | nucleus | 22.13 | 30.57 |
| HORVU4Hr1G032990.1 | Barley | cytosol | 5.19 | 30.16 |
| GSMUA_Achr6P09870_001 | Banana | nucleus | 27.6 | 29.71 |
| GSMUA_Achr4P03680_001 | Banana | nucleus | 24.86 | 29.55 |
| GSMUA_Achr4P13650_001 | Banana | plastid | 13.11 | 29.09 |
| AT4G37180.2 | Thale cress | nucleus | 28.42 | 28.65 |
| GSMUA_Achr8P18270_001 | Banana | nucleus | 28.69 | 28.3 |
| CDX69206 | Canola | nucleus | 11.75 | 27.56 |
| GSMUA_Achr11P... | Banana | nucleus | 26.78 | 26.56 |
| GSMUA_Achr6P05330_001 | Banana | nucleus | 30.6 | 26.54 |
| GSMUA_Achr10P... | Banana | nucleus | 28.42 | 26.07 |
| GSMUA_Achr3P21090_001 | Banana | nucleus | 26.5 | 26.01 |
| CDY22459 | Canola | nucleus | 27.32 | 24.57 |
| CDY29342 | Canola | cytosol, mitochondrion, nucleus | 13.39 | 24.26 |
| HORVU5Hr1G097560.4 | Barley | nucleus, plastid | 29.78 | 23.9 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr2G13380_001 | EnsemblPlants:GSMUA_Achr2P13380_001 | EnsemblPlants:GSMUA_Achr2T13380_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0S7M9 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31003 | PANTHER:PTHR31003:SF2 |
| InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0002958171 | SEG:seg | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G13380_001]
Coordinates
chr2:+:15546833..15548688
Molecular Weight (calculated)
40826.4 Da
IEP (calculated)
6.780
GRAVY (calculated)
-0.614
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSALAEMGL ELELCAMRTT VCGFVKEASA IESVGGGRAT RLEASIKSLE EEKRKIEAFR RELPLCMRLL SEVIEELRRE IDRCHGESFG CIVEEFIPIK
101: SKVGDDGGIK VESDCKDKMN WMSSVQLWSD NYIENNDDDK AIAKEKDGVV DRRQEEQSNL ECKNRRSGAA LSLFKGLPPL AARSMTEDKP TASLPELSLQ
201: SAVIKSNPDV VTPVTVDHRG GSAKGARKSP ELFRATLSVQ SQQQPPRKER RCWSQELHRR FVLAIEQLGG TQVATPKQIR ELMKVEGLTN DEVKSHLQKY
301: RLHARKMTTS WATASHSVPV IWVREEQYTS SSQQSISQAG SPTSPLQLTA ADSSEEDGKS ESYNWK
101: SKVGDDGGIK VESDCKDKMN WMSSVQLWSD NYIENNDDDK AIAKEKDGVV DRRQEEQSNL ECKNRRSGAA LSLFKGLPPL AARSMTEDKP TASLPELSLQ
201: SAVIKSNPDV VTPVTVDHRG GSAKGARKSP ELFRATLSVQ SQQQPPRKER RCWSQELHRR FVLAIEQLGG TQVATPKQIR ELMKVEGLTN DEVKSHLQKY
301: RLHARKMTTS WATASHSVPV IWVREEQYTS SSQQSISQAG SPTSPLQLTA ADSSEEDGKS ESYNWK
001: MASSSELSLD CKPQSYSMLL KSFGDNFQSD PTTHKLEDLL SRLEQERLKI DAFKRELPLC MQLLNNAVEV YKQQLEAYRA NSNNNNQSVG TRPVLEEFIP
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF
101: LRNQPEKTNN KGSNWMTTAQ LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS TEVKRVSPTN EHTNGQDGND
201: ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301: GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP
401: ESGGGERKGL AALREECEDH SNINGSEITL KF
Arabidopsis Description
EFMMyb family transcription factor EFM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ85]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.