Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023224 | Potato | nucleus | 64.35 | 46.11 |
| KRH51049 | Soybean | plastid | 91.74 | 44.7 |
| VIT_05s0020g02870.t01 | Wine grape | extracellular | 70.43 | 33.33 |
| CDY02574 | Canola | plastid | 69.13 | 33.26 |
| CDY47205 | Canola | plastid | 69.13 | 33.26 |
| Bra023712.1-P | Field mustard | plastid | 68.7 | 33.05 |
| AT5G19210.2 | Thale cress | plastid | 67.39 | 32.84 |
| Solyc01g079800.2.1 | Tomato | plastid | 65.22 | 32.68 |
| KXG34209 | Sorghum | plastid | 62.17 | 32.28 |
| Zm00001d011790_P001 | Maize | plastid | 59.13 | 30.43 |
| TraesCS3B01G592900.1 | Wheat | plastid | 59.13 | 30.36 |
| Os01t0970600-01 | Rice | plastid | 62.17 | 30.17 |
| TraesCS3D01G530600.1 | Wheat | plastid | 58.7 | 30.07 |
| GSMUA_Achr6P27990_001 | Banana | plastid | 62.17 | 29.48 |
| HORVU3Hr1G114220.3 | Barley | plastid | 58.26 | 27.07 |
| KRH19215 | Soybean | cytosol, endoplasmic reticulum, nucleus | 22.61 | 12.59 |
| KRH02682 | Soybean | cytosol, endoplasmic reticulum, nucleus | 22.61 | 12.59 |
| KRH61534 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 22.61 | 12.59 |
| KRH52210 | Soybean | cytosol, endoplasmic reticulum | 22.61 | 12.59 |
| KRH10048 | Soybean | cytosol, endoplasmic reticulum | 22.17 | 12.35 |
| KRH12430 | Soybean | cytosol | 22.17 | 12.35 |
| KRH23270 | Soybean | cytosol | 22.17 | 12.35 |
| KRH37426 | Soybean | cytosol, endoplasmic reticulum | 22.17 | 12.35 |
| KRH47074 | Soybean | nucleus | 22.17 | 12.35 |
| KRH44102 | Soybean | nucleus | 22.17 | 12.11 |
| KRH12197 | Soybean | nucleus | 21.3 | 12.07 |
| KRH37217 | Soybean | endoplasmic reticulum | 21.3 | 12.04 |
| KRH52452 | Soybean | nucleus | 21.74 | 11.71 |
| KRH61783 | Soybean | cytosol | 21.74 | 11.71 |
| KRH47464 | Soybean | nucleus | 21.3 | 11.5 |
| KRH44441 | Soybean | cytosol, nucleus | 21.3 | 11.5 |
| KRH04755 | Soybean | cytosol | 11.74 | 10.19 |
| KRH65096 | Soybean | nucleus | 20.87 | 9.62 |
| KRH48173 | Soybean | mitochondrion | 20.87 | 9.6 |
| KRH65098 | Soybean | endoplasmic reticulum, nucleus | 20.87 | 9.56 |
| KRH48170 | Soybean | endoplasmic reticulum | 20.87 | 9.54 |
| KRH43643 | Soybean | nucleus | 23.04 | 9.43 |
| KRH13813 | Soybean | nucleus | 23.04 | 9.43 |
| KRH40488 | Soybean | cytosol | 19.57 | 8.35 |
| KRG99590 | Soybean | endoplasmic reticulum, nucleus | 17.39 | 8.2 |
| KRG93607 | Soybean | nucleus | 16.96 | 7.88 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EMBL:ACUP02010293 | EnsemblPlantsGene:GLYMA_17G015700 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004004 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010501 |
| GO:GO:0016787 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | UniProt:I1MR75 | InterPro:IPR001650 | InterPro:IPR014001 |
| EnsemblPlants:KRH02098 | ProteinID:KRH02098 | ProteinID:KRH02098.1 | InterPro:P-loop_NTPase | PFAM:PF00271 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF340 | SMART:SM00490 | SUPFAM:SSF52540 | UniParc:UPI00023D6046 |
Description
hypothetical protein
Coordinates
chr17:-:1178015..1180986
Molecular Weight (calculated)
26211.6 Da
IEP (calculated)
7.613
GRAVY (calculated)
-0.122
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MLERHFFSLE TVRVLIVDEV DCIFNSSKQT VFASASIPQH NRFIHDFVQQ KWAKRDVVHI HVSAISDTKR KLQTLLSLIQ SDAPEFGIIF VAEQSEKSKK
101: AGKAPSTSLL IDFLKTSYQG DLDILLLEDK MNFNSRAASL LEVRKGGGYL LVATDIAARE VDLPEMPHIY NFDLPRTAID YLHRAGRTCR KPFSDINCTV
201: TSIIVPDERF VLQRYENELC LTVKSLFHKP
101: AGKAPSTSLL IDFLKTSYQG DLDILLLEDK MNFNSRAASL LEVRKGGGYL LVATDIAARE VDLPEMPHIY NFDLPRTAID YLHRAGRTCR KPFSDINCTV
201: TSIIVPDERF VLQRYENELC LTVKSLFHKP
001: MQVTKVARML AAKSEIDVKG CTVMALLDGG TLRRHKSWLK AEPPAILVAT VASLCHMLEK HIFRIDSVRV LVVDEVDFLF YSSKQVGSVR KLLTSFSSCD
101: KRQTVFASAS IPQHKHFVHD CIQQKWTKRD VVHVHVSAIM PMPLCLLHRF VMCEKTNKHQ VLLALLESDA PESAIIFVGE QSEKSKKAGN DPSTTLLMEF
201: LKTSYKGSLE ILLLEGDMNF NSRAASLTEI RQGGGFLLVS TDIAARGIDL PETTHIFNFD LPQTVTDYLH RAGRAGRKPF SDRKCIVANL ITSEERFVLQ
301: RYENELMFSC EEMML
101: KRQTVFASAS IPQHKHFVHD CIQQKWTKRD VVHVHVSAIM PMPLCLLHRF VMCEKTNKHQ VLLALLESDA PESAIIFVGE QSEKSKKAGN DPSTTLLMEF
201: LKTSYKGSLE ILLLEGDMNF NSRAASLTEI RQGGGFLLVS TDIAARGIDL PETTHIFNFD LPQTVTDYLH RAGRAGRKPF SDRKCIVANL ITSEERFVLQ
301: RYENELMFSC EEMML
Arabidopsis Description
RH58DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q3E9C3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.