Factsheet for Zm00001d048158_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048159_P001	Maize	cytosol	80.75	100.0
Zm00001d048157_P001	Maize	cytosol	80.43	99.62
KXG39941	Sorghum	cytosol	80.12	99.23
Zm00001d028117_P002	Maize	cytosol	80.12	99.23
Os03t0200500-01	Rice	nucleus	75.16	92.37
GSMUA_Achr3P30060_001	Banana	cytosol	70.19	86.59
GSMUA_Achr1P22500_001	Banana	cytosol	70.19	86.59
GSMUA_Achr6P24760_001	Banana	cytosol	69.25	85.77
PGSC0003DMT400069575	Potato	cytosol	68.32	84.29
GSMUA_Achr5P08700_001	Banana	cytosol	68.32	84.29
Solyc06g072490.2.1	Tomato	cytosol, nucleus, plastid, unclear	68.01	83.91
PGSC0003DMT400083968	Potato	cytosol	67.7	83.52
KRH77835	Soybean	nucleus	67.7	83.52
KRH27653	Soybean	endoplasmic reticulum	67.7	83.52
VIT_05s0020g03900.t01	Wine grape	cytosol	67.7	83.52
Solyc03g097900.2.1	Tomato	cytosol, nucleus, unclear	67.39	83.14
KRH35477	Soybean	nucleus	67.39	83.14
Zm00001d006766_P001	Maize	cytosol	33.23	82.95
CDY41904	Canola	cytosol	67.39	82.82
CDY50760	Canola	cytosol	67.39	82.82
CDX72495	Canola	cytosol	67.08	82.76
Bra017669.1-P	Field mustard	cytosol	67.08	82.76
KRG91350	Soybean	nucleus	67.08	82.76
VIT_14s0030g01810.t01	Wine grape	cytosol	67.08	82.76
CDX76296	Canola	cytosol	67.08	82.76
CDY45324	Canola	cytosol, extracellular	67.08	82.76
PGSC0003DMT400019867	Potato	cytosol	66.77	82.69
CDX69078	Canola	cytosol, extracellular	67.08	82.44
CDX75453	Canola	cytosol	67.08	82.44
Bra040409.1-P	Field mustard	cytosol	67.08	82.44
Bra001127.1-P	Field mustard	cytosol	67.08	82.44
Bra034643.1-P	Field mustard	cytosol	66.77	82.38
Solyc09g082520.2.1	Tomato	cytosol, nucleus	66.46	82.31
CDY40680	Canola	cytosol	66.77	82.06
Bra011551.1-P	Field mustard	cytosol	66.77	82.06
CDX74165	Canola	cytosol	66.77	82.06
Bra040119.1-P	Field mustard	cytosol	66.46	81.99
CDY17474	Canola	cytosol	62.11	81.63
AT4G34670.1	Thale cress	cytosol	66.15	81.3
AT3G04840.1	Thale cress	cytosol	65.84	80.92
VIT_05s0094g00620.t01	Wine grape	cytosol	25.47	76.64
KRH53243	Soybean	cytosol, endoplasmic reticulum	59.94	73.11
GSMUA_Achr8P31000_001	Banana	cytosol	14.29	73.02
CDY30019	Canola	plasma membrane	67.7	72.19
GSMUA_Achr4P16480_001	Banana	cytosol	6.21	62.5
KRH37543	Soybean	cytosol	36.96	55.35
CDY52999	Canola	cytosol	14.6	52.22
Bra026324.1-P	Field mustard	cytosol	14.6	52.22
GSMUA_Achr4P16490_001	Banana	cytosol, mitochondrion	38.2	44.73

Protein Annotations

MapMan:17.1.3.1.4	UniProt:A0A1D6PI63	ProteinID:AQL09012.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0022627	GO:GO:0030529	HAMAP:MF_03122	PFAM:PF01015	ScanProsite:PS01191	PANTHER:PTHR11830
PANTHER:PTHR11830:SF13	InterPro:Ribosomal_S1/3_euk	InterPro:Ribosomal_S3Ae	InterPro:Ribosomal_S3Ae_CS	SMART:SM01397	UniParc:UPI00084259F4
EnsemblPlantsGene:Zm00001d048158	EnsemblPlants:Zm00001d048158_P002	EnsemblPlants:Zm00001d048158_T002	SEG:seg	:	:

Description

40S ribosomal protein S3a-2

Coordinates

chr9:-:151101990..151104280

Molecular Weight (calculated)

36299.1 Da

IEP (calculated)

10.210

GRAVY (calculated)

-0.343

Length

322 amino acids

Sequence
(BLAST)

001: MIEPGNPRIV YSSPLCLRSA FSRRAADNSL PSETPSTSAA AAAAATMAVG KNKRISKGKK GGKKKTVDPF SKKDWYDIKA PSVFSVRNIG KTLVSRTQGT
101: RVCFFLTIDI FSYCPYIIAS EGLKHRVFEV CLADLQGDED QAYRKIRLRA EDVQGRNVLT NFWGMNFTTD KLRSLVKKWQ TLIEAHVDVK TTDNYMLRLF
201: CIGFTKRRPN QVKRTCYAQA SQIRQIRRKM VEIMINQAST CDLKELVSKF IPEVIGKEIE KSTSSIFPLQ NVFIRKVKIL KAPKFDLGKL MEVHGDYKED
301: VGVKLERPVE GDEAGQEVAA AE

Best Arabidopsis Sequence Match ( AT3G04840.1 )
(BLAST)

001: MAVGKNKRIS KGRKGGKKKA VDPFSKKDWY DVKAPSIFTH RNVGKTLVSR TQGTKIASEG LKHRVFEVSL ADLQGDEDNA YRKIRLRAED VQGRNVLCQF
101: WGMDFTTDKL RSLVKKWQTL IEAHVDVKTT DSYTLRLFCI AFTKRRANQV KRTCYAQSSQ IRQIRRKMRD IMVREASSCD LKDLVAKFIP EAIGREIEKA
201: TQGIYPLQNV FIRKVKILKA PKFDLGKLMD VHGDYSAEDV GVKVDRPADE MAVEEPTEII GA

Arabidopsis Description

RPS3AA40S ribosomal protein S3a-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.